| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is ygjT [C]
Identifier: 119869322
GI number: 119869322
Start: 3448370
End: 3449569
Strand: Direct
Name: ygjT [C]
Synonym: Mkms_3290
Alternate gene names: 119869322
Gene position: 3448370-3449569 (Clockwise)
Preceding gene: 119869320
Following gene: 119869324
Centisome position: 60.11
GC content: 64.83
Gene sequence:
>1200_bases ATGAACATCTCCCCTGTGCTGTGGGGGCTGACCGTCGCCGTCATCATCGCCCTGGTTCTCTTCGACTTCTTCTTCCACGT CCGCAAGGCGCACATCCCGACCTTGCGCGAGGCGGCCGTCTGGTCGGCCTTCTATGTCGGGATCGCGATCCTGTTCGGCC TCGGCGTGCTCGTGTTCGGCGGAACCAAACCCGGTCTGGAGTACTTCGCCGGGTACGTCACCGAGAAGGCGCTGTCGGTG GACAACCTGTTCGTCTTCCTCGTCATCATCGGCAGCTTCGCGGTGCCGCGCGCCGATCAGCAGAAGGTCCTGCTGTTCGG CATCGTGTTCGCGCTCATCGCGCGCACCGGGCTGATCTTCGTGGGCGCCGCGCTGATCAACGCCTTCGCGTGGGTCTTCT ATCTGTTCGCGCTCATCCTGCTGCTCACCGCCGGGCAGCTGATCAAACCCGACGACGACGACCGCGGCGCGGACAACCTG GTGATCCGGCTGGCGCGGCGGTTCCTGCGTACCACCGACGACTACGACGGCGACAAGCTGTTCACCGTCGAGAACGGCAA GCGGATGCTGACGCCGATGCTGCTGGTCATGGTGGCCATCGGCGGCACCGACCTGCTGTTCGCCCTGGACTCGATCCCGG CGATCTTCGGCCTCACCCAGGACGTCTACATCGTCTTCACCGCCACCGCGTTCAGCCTGCTGGGGCTGCGCCAGCTGTAC TTCCTGATCGACGGGCTGCTGGACCGCCTGATCTACCTGCACTTCGGGCTGGCCGCGATCCTGGCGTTCATCGGCGTCAA GCTGTTCCTGCACGCACTGCACGAGAACAACGTGCCGTTCATCAACGACGGTGAACCGGTCAACGTCGTCGAGGTCAGCA CCCCGGTGTCGCTGGGCGTGATCATCACGCTGCTGCTGGTCACCACGGTGGCATCGCTGGTGTCGCCGAAGGGCCGGGTC AAGAACGCGATCGGCAGCGCCCAGCGCCACGCCACCACCTACCTGAACAAGACCTACTACGGCGAAGACGCCGCCGAACG CGAGAAGGCGTTCGCGAAGCTGTGCGCCGAGGAGCAGCAGATCAAGCAGATGCCGCCCAAGTACCGGGCCATGATCCGCC GCGAGGACGATCTGATGGATCTGCTGCGCCGTGCGCACGCCGAGCACGACCGGTATCTGGCCGAGGAGAAGTCGACGTGA
Upstream 100 bases:
>100_bases ATGACCGCCGCATTCGCCGTCAGCTCGCACGCGTGACCCGGCCGCGTTGTGGGAACACTGACGCCATGCTCACTGCCCGG ACGCGATCGGCCGCCACCCG
Downstream 100 bases:
>100_bases CCGCTCAGTACACGTCGCGCAGGTAGCGCTTCCCCGCGACGAGGCTCTTCTTGTATTCGCGCGCAGCCGATTCCGACAGG CCGCCGTGCTTCCGGATGAT
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MNISPVLWGLTVAVIIALVLFDFFFHVRKAHIPTLREAAVWSAFYVGIAILFGLGVLVFGGTKPGLEYFAGYVTEKALSV DNLFVFLVIIGSFAVPRADQQKVLLFGIVFALIARTGLIFVGAALINAFAWVFYLFALILLLTAGQLIKPDDDDRGADNL VIRLARRFLRTTDDYDGDKLFTVENGKRMLTPMLLVMVAIGGTDLLFALDSIPAIFGLTQDVYIVFTATAFSLLGLRQLY FLIDGLLDRLIYLHFGLAAILAFIGVKLFLHALHENNVPFINDGEPVNVVEVSTPVSLGVIITLLLVTTVASLVSPKGRV KNAIGSAQRHATTYLNKTYYGEDAAEREKAFAKLCAEEQQIKQMPPKYRAMIRREDDLMDLLRRAHAEHDRYLAEEKST
Sequences:
>Translated_399_residues MNISPVLWGLTVAVIIALVLFDFFFHVRKAHIPTLREAAVWSAFYVGIAILFGLGVLVFGGTKPGLEYFAGYVTEKALSV DNLFVFLVIIGSFAVPRADQQKVLLFGIVFALIARTGLIFVGAALINAFAWVFYLFALILLLTAGQLIKPDDDDRGADNL VIRLARRFLRTTDDYDGDKLFTVENGKRMLTPMLLVMVAIGGTDLLFALDSIPAIFGLTQDVYIVFTATAFSLLGLRQLY FLIDGLLDRLIYLHFGLAAILAFIGVKLFLHALHENNVPFINDGEPVNVVEVSTPVSLGVIITLLLVTTVASLVSPKGRV KNAIGSAQRHATTYLNKTYYGEDAAEREKAFAKLCAEEQQIKQMPPKYRAMIRREDDLMDLLRRAHAEHDRYLAEEKST >Mature_399_residues MNISPVLWGLTVAVIIALVLFDFFFHVRKAHIPTLREAAVWSAFYVGIAILFGLGVLVFGGTKPGLEYFAGYVTEKALSV DNLFVFLVIIGSFAVPRADQQKVLLFGIVFALIARTGLIFVGAALINAFAWVFYLFALILLLTAGQLIKPDDDDRGADNL VIRLARRFLRTTDDYDGDKLFTVENGKRMLTPMLLVMVAIGGTDLLFALDSIPAIFGLTQDVYIVFTATAFSLLGLRQLY FLIDGLLDRLIYLHFGLAAILAFIGVKLFLHALHENNVPFINDGEPVNVVEVSTPVSLGVIITLLLVTTVASLVSPKGRV KNAIGSAQRHATTYLNKTYYGEDAAEREKAFAKLCAEEQQIKQMPPKYRAMIRREDDLMDLLRRAHAEHDRYLAEEKST
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=316, Percent_Identity=36.7088607594937, Blast_Score=196, Evalue=1e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 44250; Mature: 44250
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISPVLWGLTVAVIIALVLFDFFFHVRKAHIPTLREAAVWSAFYVGIAILFGLGVLVFG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GTKPGLEYFAGYVTEKALSVDNLFVFLVIIGSFAVPRADQQKVLLFGIVFALIARTGLIF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH VGAALINAFAWVFYLFALILLLTAGQLIKPDDDDRGADNLVIRLARRFLRTTDDYDGDKL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEE FTVENGKRMLTPMLLVMVAIGGTDLLFALDSIPAIFGLTQDVYIVFTATAFSLLGLRQLY EEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FLIDGLLDRLIYLHFGLAAILAFIGVKLFLHALHENNVPFINDGEPVNVVEVSTPVSLGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHH IITLLLVTTVASLVSPKGRVKNAIGSAQRHATTYLNKTYYGEDAAEREKAFAKLCAEEQQ HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH IKQMPPKYRAMIRREDDLMDLLRRAHAEHDRYLAEEKST HHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNISPVLWGLTVAVIIALVLFDFFFHVRKAHIPTLREAAVWSAFYVGIAILFGLGVLVFG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GTKPGLEYFAGYVTEKALSVDNLFVFLVIIGSFAVPRADQQKVLLFGIVFALIARTGLIF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH VGAALINAFAWVFYLFALILLLTAGQLIKPDDDDRGADNLVIRLARRFLRTTDDYDGDKL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEE FTVENGKRMLTPMLLVMVAIGGTDLLFALDSIPAIFGLTQDVYIVFTATAFSLLGLRQLY EEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FLIDGLLDRLIYLHFGLAAILAFIGVKLFLHALHENNVPFINDGEPVNVVEVSTPVSLGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHH IITLLLVTTVASLVSPKGRVKNAIGSAQRHATTYLNKTYYGEDAAEREKAFAKLCAEEQQ HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH IKQMPPKYRAMIRREDDLMDLLRRAHAEHDRYLAEEKST HHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]