Definition Mycobacterium sp. KMS chromosome, complete genome.
Accession NC_008705
Length 5,737,227

Click here to switch to the map view.

The map label for this gene is 119867899

Identifier: 119867899

GI number: 119867899

Start: 1974822

End: 1975424

Strand: Reverse

Name: 119867899

Synonym: Mkms_1860

Alternate gene names: NA

Gene position: 1975424-1974822 (Counterclockwise)

Preceding gene: 119867904

Following gene: 119867898

Centisome position: 34.43

GC content: 73.3

Gene sequence:

>603_bases
GTGAGCGCCCCCGACCGGTTCGCCCCGCTCCCGGTGACCGATGAGCCGCAGGAGCGTGGGGACGCCGCGCGCAACCGGCT
GCTGCTGCTCGAGGCGGCGCGCCGGTTGATCGCCGAACGGGGTGCCGGCGCGGTGAGCACCGATGACATCGCGGCCGCCG
CGGGCGTCGGCAAGGGCACGCTGTTCCGGCGCTTCGGGAGCCGGGCCGGTCTGATGGTGGTACTGCTCGACGAGGACGAG
AAGGCCCAGCAGCAGGCCTTCCTCTTCGGGCCGCCGCCACTCGGTCCCGGCGCCCCTCCGCTGGAGCGGTTGCTGGCCTA
CGGGCGGGCCCGGCACACGTTCGTCCACGACCATTACGCCCTGCTCTCGGATGCCGGGCGCGATCCGCAGACCCGCTTCA
CCGGGCCGTTCCGACTGCATCACGCCCACATCCGGATGCTGCTGCAGTCGGCGGGCACCACCGGGGACCTCGATGCGCAG
ACCGCCGCCCTGACCGCCCTCCTCGACGCCGACTACATCGAGCACCGTCTCGCCGACGGCGCCACGCTCGACGAGGTGGC
CGACGCGTGGGAGGTCGTGGCCGTCAAGCTGTGTGGGCGGTGA

Upstream 100 bases:

>100_bases
GACATGTCAGTTTCCTTTCGCGCACCATTGACGTTCTCCGACTCGCTGACAGTAACCGGACTACGGTCCGATTAATTCCG
GCTGGACTACAGTCGTTGTC

Downstream 100 bases:

>100_bases
GGCGTGCCGCGCTGGATCCTGCACGTCGACCTCGACCAGTTCCTCGCCTCGGTCGAGCTGCGCCGACACCCGGAACTGGC
GGGGCTGCCGGTGATCGTCG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSAPDRFAPLPVTDEPQERGDAARNRLLLLEAARRLIAERGAGAVSTDDIAAAAGVGKGTLFRRFGSRAGLMVVLLDEDE
KAQQQAFLFGPPPLGPGAPPLERLLAYGRARHTFVHDHYALLSDAGRDPQTRFTGPFRLHHAHIRMLLQSAGTTGDLDAQ
TAALTALLDADYIEHRLADGATLDEVADAWEVVAVKLCGR

Sequences:

>Translated_200_residues
MSAPDRFAPLPVTDEPQERGDAARNRLLLLEAARRLIAERGAGAVSTDDIAAAAGVGKGTLFRRFGSRAGLMVVLLDEDE
KAQQQAFLFGPPPLGPGAPPLERLLAYGRARHTFVHDHYALLSDAGRDPQTRFTGPFRLHHAHIRMLLQSAGTTGDLDAQ
TAALTALLDADYIEHRLADGATLDEVADAWEVVAVKLCGR
>Mature_199_residues
SAPDRFAPLPVTDEPQERGDAARNRLLLLEAARRLIAERGAGAVSTDDIAAAAGVGKGTLFRRFGSRAGLMVVLLDEDEK
AQQQAFLFGPPPLGPGAPPLERLLAYGRARHTFVHDHYALLSDAGRDPQTRFTGPFRLHHAHIRMLLQSAGTTGDLDAQT
AALTALLDADYIEHRLADGATLDEVADAWEVVAVKLCGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21524; Mature: 21392

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPDRFAPLPVTDEPQERGDAARNRLLLLEAARRLIAERGAGAVSTDDIAAAAGVGKGT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHH
LFRRFGSRAGLMVVLLDEDEKAQQQAFLFGPPPLGPGAPPLERLLAYGRARHTFVHDHYA
HHHHHCCCCCEEEEEECCCCHHHHCEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
LLSDAGRDPQTRFTGPFRLHHAHIRMLLQSAGTTGDLDAQTAALTALLDADYIEHRLADG
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
ATLDEVADAWEVVAVKLCGR
CCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAPDRFAPLPVTDEPQERGDAARNRLLLLEAARRLIAERGAGAVSTDDIAAAAGVGKGT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHH
LFRRFGSRAGLMVVLLDEDEKAQQQAFLFGPPPLGPGAPPLERLLAYGRARHTFVHDHYA
HHHHHCCCCCEEEEEECCCCHHHHCEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
LLSDAGRDPQTRFTGPFRLHHAHIRMLLQSAGTTGDLDAQTAALTALLDADYIEHRLADG
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
ATLDEVADAWEVVAVKLCGR
CCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA