| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867504
Identifier: 119867504
GI number: 119867504
Start: 1567441
End: 1568280
Strand: Reverse
Name: 119867504
Synonym: Mkms_1454
Alternate gene names: NA
Gene position: 1568280-1567441 (Counterclockwise)
Preceding gene: 119867506
Following gene: 119867502
Centisome position: 27.34
GC content: 64.05
Gene sequence:
>840_bases ATGACGGCGCTAAGAATCCTCGCCGTGAGTCTGACCGCCGCCGTAGTCGCGGCATGTTCGTCGAACACGGTGGACAGCAC GCCCGCGATAGTGCCTGGCATGGTGCATATTCATGGCCTGGGAATCAACCCCGCCGACGACCAGCTCTACGTCGCGACGC ACTATGGCCTGTTCCGCGCAGGCGAGGATCAGGCACCGCAGCGAGTCGGCGACCTAGCACAGGACTTCATGGGCTTCACC GTTACCGGCGGCGACGAGTTCCTAGCCAGCGGCCACCCCGATCCTGCCGACCGGTCACAACCACCGCATCTGGGTCTGAT CAAAAGCGACGATGCCGGCCGATCATGGGAATCGCTATCGCTCAAAGGCAGCGCCGACTTCCACGCATTGGAATACCGTC ACAACCGGATCTACGGCCATGACAGCCAATCGGGTCGGGTCATGATGAGCACCGACGAAAAGTCCTGGCAACAGCGCGCA GAGATCGCTGCACACGACCTTGCCGTCTCGCCCGCAGACGCCAACGACATCCTCGCCACAACCCAACAGGGCCTGTTTCG TAGCGCCGACGGCGCGATGACCTTCGGCGCCGTTGCCGGCGCTCCGGCCCTCGTCTTTGTCAGCTGGCCAGACAGCGGCC CTCTCATCGGAGCCGACGCGCAAGGAACCCTGTACACCAGCATCGACGGCCAAACCTGGCAGCCACAGCATCGCCTCAAC GCGACACCTCAAGCCCTCCTGGCCGCCGGCGACCGCCAGGTCTACGTCGCCACCGACACCGCCATCTACCAATCAGGCGA TGACGGCGCCACAGTCAGCGTGCTCAGCACCGTCGACTGA
Upstream 100 bases:
>100_bases GACGGCCTACGACGATCACCGAAACACCCAGCACTGCTGGACACCGGCAACGCCAACCTACTATGAAGCTACGTAGATCC GTCGACGAGAGGAATCCCTT
Downstream 100 bases:
>100_bases GGGCCCCACACCGTCTTGCCGGCGTCGTTCAAGGCACCTCACTCCATACGTTCCGACACCTAACGGAGCATGCGATAGCC GCCGACCACCACCTCGTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: BNR Repeat-Containing Glycosyl Hydrolase; BNR Repeat Domain Protein; Group-Specific Protein; BNR Repeat-Containing Protein; Glycosyl Hydrolase BNR Repeat-Containing Glycosyl Hydrolase; Glycosyl Hydrolase; Glycosyl Hydrolase BNR Repeat-Containing Protein; BNR/Asp-Box Repeat Domain Protein
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTALRILAVSLTAAVVAACSSNTVDSTPAIVPGMVHIHGLGINPADDQLYVATHYGLFRAGEDQAPQRVGDLAQDFMGFT VTGGDEFLASGHPDPADRSQPPHLGLIKSDDAGRSWESLSLKGSADFHALEYRHNRIYGHDSQSGRVMMSTDEKSWQQRA EIAAHDLAVSPADANDILATTQQGLFRSADGAMTFGAVAGAPALVFVSWPDSGPLIGADAQGTLYTSIDGQTWQPQHRLN ATPQALLAAGDRQVYVATDTAIYQSGDDGATVSVLSTVD
Sequences:
>Translated_279_residues MTALRILAVSLTAAVVAACSSNTVDSTPAIVPGMVHIHGLGINPADDQLYVATHYGLFRAGEDQAPQRVGDLAQDFMGFT VTGGDEFLASGHPDPADRSQPPHLGLIKSDDAGRSWESLSLKGSADFHALEYRHNRIYGHDSQSGRVMMSTDEKSWQQRA EIAAHDLAVSPADANDILATTQQGLFRSADGAMTFGAVAGAPALVFVSWPDSGPLIGADAQGTLYTSIDGQTWQPQHRLN ATPQALLAAGDRQVYVATDTAIYQSGDDGATVSVLSTVD >Mature_278_residues TALRILAVSLTAAVVAACSSNTVDSTPAIVPGMVHIHGLGINPADDQLYVATHYGLFRAGEDQAPQRVGDLAQDFMGFTV TGGDEFLASGHPDPADRSQPPHLGLIKSDDAGRSWESLSLKGSADFHALEYRHNRIYGHDSQSGRVMMSTDEKSWQQRAE IAAHDLAVSPADANDILATTQQGLFRSADGAMTFGAVAGAPALVFVSWPDSGPLIGADAQGTLYTSIDGQTWQPQHRLNA TPQALLAAGDRQVYVATDTAIYQSGDDGATVSVLSTVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29389; Mature: 29258
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALRILAVSLTAAVVAACSSNTVDSTPAIVPGMVHIHGLGINPADDQLYVATHYGLFRA CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCEEEC GEDQAPQRVGDLAQDFMGFTVTGGDEFLASGHPDPADRSQPPHLGLIKSDDAGRSWESLS CCCCCHHHHHHHHHHHCCEEEECCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEE LKGSADFHALEYRHNRIYGHDSQSGRVMMSTDEKSWQQRAEIAAHDLAVSPADANDILAT ECCCCCEEEEEEECCEEECCCCCCCEEEEECCHHHHHHHHHHHHHHEEECCCCCCHHHHH TQQGLFRSADGAMTFGAVAGAPALVFVSWPDSGPLIGADAQGTLYTSIDGQTWQPQHRLN HHHHHHCCCCCCEEEHHHCCCCEEEEEECCCCCCEEECCCCCEEEEECCCCCCCCHHHCC ATPQALLAAGDRQVYVATDTAIYQSGDDGATVSVLSTVD CCHHHHHCCCCCEEEEEECCEEEECCCCCCEEEEEEECC >Mature Secondary Structure TALRILAVSLTAAVVAACSSNTVDSTPAIVPGMVHIHGLGINPADDQLYVATHYGLFRA CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCEEEC GEDQAPQRVGDLAQDFMGFTVTGGDEFLASGHPDPADRSQPPHLGLIKSDDAGRSWESLS CCCCCHHHHHHHHHHHCCEEEECCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEE LKGSADFHALEYRHNRIYGHDSQSGRVMMSTDEKSWQQRAEIAAHDLAVSPADANDILAT ECCCCCEEEEEEECCEEECCCCCCCEEEEECCHHHHHHHHHHHHHHEEECCCCCCHHHHH TQQGLFRSADGAMTFGAVAGAPALVFVSWPDSGPLIGADAQGTLYTSIDGQTWQPQHRLN HHHHHHCCCCCCEEEHHHCCCCEEEEEECCCCCCEEECCCCCEEEEECCCCCCCCHHHCC ATPQALLAAGDRQVYVATDTAIYQSGDDGATVSVLSTVD CCHHHHHCCCCCEEEEEECCEEEECCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA