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The map label for this gene is yidL [C]

Identifier: 119867502

GI number: 119867502

Start: 1565152

End: 1565925

Strand: Reverse

Name: yidL [C]

Synonym: Mkms_1452

Alternate gene names: 119867502

Gene position: 1565925-1565152 (Counterclockwise)

Preceding gene: 119867504

Following gene: 119867501

Centisome position: 27.29

GC content: 66.28

Gene sequence:

>774_bases
ATGAACGGGTCACACCGCGGTGATCACCGGCCCCCACCGCAGCCGCGCTGGGCAGGGACGGCGCTGCTGCGCCCCGGGGT
GCTGGCCTTCGCCGGGTCCATCGGCACCACCGACGTCCACGCCCATCACGCTATTCAGATCTTGACTGCCACAACGCCGT
TGACCATCGCCGACGCACACGGTTCTCGCTACCGCGCCACCAAGGTGGTCATACCCGCTGACGTGGCGCACCAGATCGAG
GTCGGTGCCGTAGACGGAACTGTGGTGTTCTTAGAGCCGGAATCCGCCGCGGGGCGGTCCGCGCACCTACGCGCCCTCCG
GTCCGGATGGGCCGTGACCCCTGCCCTAGCTCACACCCGGCGACGACCGCTCGCCACGGTGGTTCGTGAGCTGTTAGAGC
AATTCGGACCGCAACAGGCCGACAGCGAGATCGCACTCCACCATCCCGCTGTCGACGACGCATTGCACCTCCTACCGAAC
ATGGTGGCCACAGGTCCACTGAGGGTTGCCGACCTCGCGCCACAAGTAGGCATCTCCGTCAGCCGGCTCACGCACCTGTT
CACCGAGCAAGTCGAAATCCCGCTGCGCCGGTATGTGCTGTGGACACGCCTGCGCATCGCGATCACCCGAGTCCAAGCCG
GCGACGACCTCACCGAGGCCGCGCATCAAGCGGGATTCGCTGACAGCGCCCACCTAACCCGCACCACCCGAGACATGTTC
GGCTTGGCGCCCTCAGCGCTGAGCAAGCACGTGTCCTGGAACCTCGAAGCATAA

Upstream 100 bases:

>100_bases
AGGTGGCGAATGAAGCCACACGCCACCTTCGCGCACCTGCCTCACCGCGCCGCTACGAGCGACTCGACAATCCGCCACAA
GCGCTGAGACCGTTACAGCG

Downstream 100 bases:

>100_bases
GAGTCAGCCGAAACGTTCAATCCCCATCGCACCGCCGGGCGCCACCATCGAGTCATGCACGCAACGTCGACATCAACCAC
CTCCGCGGTCCAATCGCTCA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator AraC Family; Transcriptional Regulator AraC Family Protein; Helix-Turn-Helix AraC Domain Protein; Transcriptional Regulator Arac Family; Arac Family Transcriptional Regulator; Transcriptional Regulator; Helix-Turn-Helix Arac Domain Protein

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNGSHRGDHRPPPQPRWAGTALLRPGVLAFAGSIGTTDVHAHHAIQILTATTPLTIADAHGSRYRATKVVIPADVAHQIE
VGAVDGTVVFLEPESAAGRSAHLRALRSGWAVTPALAHTRRRPLATVVRELLEQFGPQQADSEIALHHPAVDDALHLLPN
MVATGPLRVADLAPQVGISVSRLTHLFTEQVEIPLRRYVLWTRLRIAITRVQAGDDLTEAAHQAGFADSAHLTRTTRDMF
GLAPSALSKHVSWNLEA

Sequences:

>Translated_257_residues
MNGSHRGDHRPPPQPRWAGTALLRPGVLAFAGSIGTTDVHAHHAIQILTATTPLTIADAHGSRYRATKVVIPADVAHQIE
VGAVDGTVVFLEPESAAGRSAHLRALRSGWAVTPALAHTRRRPLATVVRELLEQFGPQQADSEIALHHPAVDDALHLLPN
MVATGPLRVADLAPQVGISVSRLTHLFTEQVEIPLRRYVLWTRLRIAITRVQAGDDLTEAAHQAGFADSAHLTRTTRDMF
GLAPSALSKHVSWNLEA
>Mature_257_residues
MNGSHRGDHRPPPQPRWAGTALLRPGVLAFAGSIGTTDVHAHHAIQILTATTPLTIADAHGSRYRATKVVIPADVAHQIE
VGAVDGTVVFLEPESAAGRSAHLRALRSGWAVTPALAHTRRRPLATVVRELLEQFGPQQADSEIALHHPAVDDALHLLPN
MVATGPLRVADLAPQVGISVSRLTHLFTEQVEIPLRRYVLWTRLRIAITRVQAGDDLTEAAHQAGFADSAHLTRTTRDMF
GLAPSALSKHVSWNLEA

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27736; Mature: 27736

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGSHRGDHRPPPQPRWAGTALLRPGVLAFAGSIGTTDVHAHHAIQILTATTPLTIADAH
CCCCCCCCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCCHHHEEEEEEECCCEEEECCC
GSRYRATKVVIPADVAHQIEVGAVDGTVVFLEPESAAGRSAHLRALRSGWAVTPALAHTR
CCCEEEEEEEECCCCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHC
RRPLATVVRELLEQFGPQQADSEIALHHPAVDDALHLLPNMVATGPLRVADLAPQVGISV
CCCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCEEHHHCCCHHCCHH
SRLTHLFTEQVEIPLRRYVLWTRLRIAITRVQAGDDLTEAAHQAGFADSAHLTRTTRDMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHH
GLAPSALSKHVSWNLEA
CCCHHHHHHHCEEECCC
>Mature Secondary Structure
MNGSHRGDHRPPPQPRWAGTALLRPGVLAFAGSIGTTDVHAHHAIQILTATTPLTIADAH
CCCCCCCCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCCHHHEEEEEEECCCEEEECCC
GSRYRATKVVIPADVAHQIEVGAVDGTVVFLEPESAAGRSAHLRALRSGWAVTPALAHTR
CCCEEEEEEEECCCCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHC
RRPLATVVRELLEQFGPQQADSEIALHHPAVDDALHLLPNMVATGPLRVADLAPQVGISV
CCCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCEEHHHCCCHHCCHH
SRLTHLFTEQVEIPLRRYVLWTRLRIAITRVQAGDDLTEAAHQAGFADSAHLTRTTRDMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHH
GLAPSALSKHVSWNLEA
CCCHHHHHHHCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA