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The map label for this gene is ygdK [C]

Identifier: 119867357

GI number: 119867357

Start: 1399825

End: 1400241

Strand: Reverse

Name: ygdK [C]

Synonym: Mkms_1307

Alternate gene names: 119867357

Gene position: 1400241-1399825 (Counterclockwise)

Preceding gene: 119867358

Following gene: 119867356

Centisome position: 24.41

GC content: 70.26

Gene sequence:

>417_bases
ATGACCATGCCGGCCCCTCTCGCCGAGGTCGTCTCCGAGTTCCAGGAGGTGCAGGGACAGGACAAGCTACGGCTGCTCCT
CGAGTTCGCCGACGACCTGCCCGCGCTGCCCTCCGAACTCGAGGAGGCGGCGATGGAACCGGTGCCCGAATGCCAGTCGC
CGTTGTTCCTGCATGTCGACGCGGGCGACCGCGACCGGGTGCGGCTGTACTTCAGCGCGCCGGCCGAAGCGCCGACCACG
CGCGGTTTCGCGGCGATCCTGGCGACCGGGCTGGACGAGCAGGCGGCGGAGGACATCCTCGGCGTGCCCGACGACTTCTA
CACCGAGTTGGGGCTGGCGGCGCTGATCAGCCCGCTGCGGCTGCGGGGGATGTCGGCGATGCTGACGCGGATCAAACGCC
GGTTGCGGGACGGCTGA

Upstream 100 bases:

>100_bases
CGGGTGTGCGCAACTACGACGGCTCCTGGACCGAATGGGGTAACGCGGTGCGTGTCCCCGTCGCGGTCGGTCCCGATCCG
GGCGAGGCACCCGCGTCGTC

Downstream 100 bases:

>100_bases
CCAATCCCGAACGGGCCCAACGCGCAACTTACTTACGAGTAACCGATACCGGTTACCGACCGCCTCAGGGGCGACGCTTA
AACTCCCCCATTAGTTTCTC

Product: Fe-S metabolism associated SufE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MTMPAPLAEVVSEFQEVQGQDKLRLLLEFADDLPALPSELEEAAMEPVPECQSPLFLHVDAGDRDRVRLYFSAPAEAPTT
RGFAAILATGLDEQAAEDILGVPDDFYTELGLAALISPLRLRGMSAMLTRIKRRLRDG

Sequences:

>Translated_138_residues
MTMPAPLAEVVSEFQEVQGQDKLRLLLEFADDLPALPSELEEAAMEPVPECQSPLFLHVDAGDRDRVRLYFSAPAEAPTT
RGFAAILATGLDEQAAEDILGVPDDFYTELGLAALISPLRLRGMSAMLTRIKRRLRDG
>Mature_137_residues
TMPAPLAEVVSEFQEVQGQDKLRLLLEFADDLPALPSELEEAAMEPVPECQSPLFLHVDAGDRDRVRLYFSAPAEAPTTR
GFAAILATGLDEQAAEDILGVPDDFYTELGLAALISPLRLRGMSAMLTRIKRRLRDG

Specific function: Unknown

COG id: COG2166

COG function: function code R; SufE protein probably involved in Fe-S center assembly

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sufE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003808 [H]

Pfam domain/function: PF02657 SufE [H]

EC number: NA

Molecular weight: Translated: 15140; Mature: 15008

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMPAPLAEVVSEFQEVQGQDKLRLLLEFADDLPALPSELEEAAMEPVPECQSPLFLHVD
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEC
AGDRDRVRLYFSAPAEAPTTRGFAAILATGLDEQAAEDILGVPDDFYTELGLAALISPLR
CCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LRGMSAMLTRIKRRLRDG
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TMPAPLAEVVSEFQEVQGQDKLRLLLEFADDLPALPSELEEAAMEPVPECQSPLFLHVD
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEC
AGDRDRVRLYFSAPAEAPTTRGFAAILATGLDEQAAEDILGVPDDFYTELGLAALISPLR
CCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LRGMSAMLTRIKRRLRDG
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]