| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is bccA [H]
Identifier: 119867356
GI number: 119867356
Start: 1397868
End: 1399676
Strand: Reverse
Name: bccA [H]
Synonym: Mkms_1306
Alternate gene names: 119867356
Gene position: 1399676-1397868 (Counterclockwise)
Preceding gene: 119867357
Following gene: 119867354
Centisome position: 24.4
GC content: 69.6
Gene sequence:
>1809_bases GTGGCCAGTCACGCCAGCTCGAAGATCTCCAAGGTGCTTGTCGCCAACCGAGGAGAGATTGCCGTCCGGGTCATCCGCGC GGCCAAGGACGCCGGGCTGCAGAGCGTGGCCGTCTATGCCGAACCCGACGCCGACGCCCCGCACGTGCGGCTCGCGGACG AGGCCTTCGCGCTGGGTGGTCAGACCTCGGCCGAGTCGTACCTCGTGTTCGAGAAGCTGCTCGACGCGGCGGAGAAGTCC GGCGCAAACGCGATCCACCCGGGATACGGCTTCCTGAGCGAGAACGCCGACTTCGCGCAGGCCGTCATCGACGCAGGGCT GATCTGGATCGGCCCGAGCCCGCAGTCGATCCGCGACCTCGGCGACAAGGTGACCGCCCGTCACATCGCCGCACGCGCAC AGGCGCCCCTGGTCCCCGGCACGCCGGACCCGGTCAAGGACGCCGACGAGGTGGTCGCGTTCGCCGAGGAGTACGGCGTC CCGGTCGCGATCAAGGCCGCGTTCGGCGGCGGCGGTCGCGGCATGAAGGTGGCGCGCACCATCCAGGAGATTCCCGAGCT GTTCGATTCGGCCACCCGTGAGGCCGTGGCCGCGTTCGGCCGCGGTGAGTGCTTCGTCGAGCGCTACCTCGACAAGCCGC GCCACGTCGAGGCGCAGGTGATCGCCGATCAGCACGGCAACGTCGTCGTCGCGGGCACCCGCGACTGCTCGCTGCAACGC CGCTTCCAGAAGCTGGTGGAGGAGGCCCCCGCGCCGTTCCTGACCGACGCGCAGCGCAAGGAGATCCACGAGTCGGCCAA GCGGATCTGCAAGGAGGCCGGCTACTACGGTGCGGGCACCGTGGAGTACCTGGTGGGCCAGGACGGCCTGATCTCGTTCC TCGAGGTGAACACCCGCCTGCAGGTGGAGCATCCGGTCACCGAGGAGACCTCGGGCATCGACCTGGTCCGCCAGCAGTTC CGGATCGCCAACGGTGAGCCCCTCGACATCACCGAGGACCCGACACCGCGCGGACACTCGATCGAGTTCCGCATCAACGG TGAGGACGCCGGGCGCGGCTTCCTGCCCGCCCCAGGCCCCGTCACCACGTTCGAACCGCCCACCGGTCCCGGCGTCCGCC TGGACTCCGGTGTGGAGTCCGGATCGGTGATCGGCGGTCAGTTCGACTCGATGCTGGCCAAGCTGATCGTCACCGGCGCC ACCCGCGAGGAGGCGCTGGAGCGCTCACGGCGTGCACTGGCGGAGTTCAAGGTCGAAGGACTCGCCACGGTCATCCCGTT CCACCGCGCGGTGGTCAGCGATCCCGCCTTCATCGGCGACGAGAACGGCTTCACGGTGCACACCCGGTGGATCGAGACCG AGTGGGACAACACCATCGAACCGTTCACCGGTGGCGACCCGATCGACGAAGAGGACACCGCACCGCGCCAGACCGTGGTC GTTGAGGTCGGCGGCCGGCGTCTCGAGGTCTCGCTGCCGGGCGATCTGGTCCTCGGCAACGGTGGCGGCGCCGCCCCTGC GGGCGTGATCCGCAAGAAGCCGAAGCCGCGTAAGCGCGGTGCGCACGGCGGTGCGGCGACGTCCGGCGACTCGGTGACAG CGCCCATGCAGGGCACCGTCGTCAAGGTGGCCGTCGAAGAGGGCCAGCAGGTGTCCGCCGGCGATCTGGTCGTGGTCCTC GAGGCCATGAAGATGGAGAACCCGGTGACCGCCCACAAGGACGGCACCATCACCGGACTCGCGGTCGAGGCGGGCGCCGC TGTCACCCAGGGCACCGTGCTGGCCGAGATCAAGAGCGACGGCGAGTAA
Upstream 100 bases:
>100_bases CCGGTTACCGACCGCCTCAGGGGCGACGCTTAAACTCCCCCATTAGTTTCTCAAGACGTTCTTAAGTGAGTGCCCGAAAG GCATATCAGCAGGAGGCGAA
Downstream 100 bases:
>100_bases CCCTTCCGCTTTACCCCCGGCGCAGTCGGTTCGGCCCAGGTCGAACCGACTGCGCCGGGTTTTTTGTGCCGCTCGGCGGG CCCCGACCGCGGTCCGGTGC
Product: carbamoyl-phosphate synthase L chain, ATP-binding
Products: NA
Alternate protein names: Biotin carboxylase; Biotin carboxyl carrier protein; BCCP [H]
Number of amino acids: Translated: 602; Mature: 601
Protein sequence:
>602_residues MASHASSKISKVLVANRGEIAVRVIRAAKDAGLQSVAVYAEPDADAPHVRLADEAFALGGQTSAESYLVFEKLLDAAEKS GANAIHPGYGFLSENADFAQAVIDAGLIWIGPSPQSIRDLGDKVTARHIAARAQAPLVPGTPDPVKDADEVVAFAEEYGV PVAIKAAFGGGGRGMKVARTIQEIPELFDSATREAVAAFGRGECFVERYLDKPRHVEAQVIADQHGNVVVAGTRDCSLQR RFQKLVEEAPAPFLTDAQRKEIHESAKRICKEAGYYGAGTVEYLVGQDGLISFLEVNTRLQVEHPVTEETSGIDLVRQQF RIANGEPLDITEDPTPRGHSIEFRINGEDAGRGFLPAPGPVTTFEPPTGPGVRLDSGVESGSVIGGQFDSMLAKLIVTGA TREEALERSRRALAEFKVEGLATVIPFHRAVVSDPAFIGDENGFTVHTRWIETEWDNTIEPFTGGDPIDEEDTAPRQTVV VEVGGRRLEVSLPGDLVLGNGGGAAPAGVIRKKPKPRKRGAHGGAATSGDSVTAPMQGTVVKVAVEEGQQVSAGDLVVVL EAMKMENPVTAHKDGTITGLAVEAGAAVTQGTVLAEIKSDGE
Sequences:
>Translated_602_residues MASHASSKISKVLVANRGEIAVRVIRAAKDAGLQSVAVYAEPDADAPHVRLADEAFALGGQTSAESYLVFEKLLDAAEKS GANAIHPGYGFLSENADFAQAVIDAGLIWIGPSPQSIRDLGDKVTARHIAARAQAPLVPGTPDPVKDADEVVAFAEEYGV PVAIKAAFGGGGRGMKVARTIQEIPELFDSATREAVAAFGRGECFVERYLDKPRHVEAQVIADQHGNVVVAGTRDCSLQR RFQKLVEEAPAPFLTDAQRKEIHESAKRICKEAGYYGAGTVEYLVGQDGLISFLEVNTRLQVEHPVTEETSGIDLVRQQF RIANGEPLDITEDPTPRGHSIEFRINGEDAGRGFLPAPGPVTTFEPPTGPGVRLDSGVESGSVIGGQFDSMLAKLIVTGA TREEALERSRRALAEFKVEGLATVIPFHRAVVSDPAFIGDENGFTVHTRWIETEWDNTIEPFTGGDPIDEEDTAPRQTVV VEVGGRRLEVSLPGDLVLGNGGGAAPAGVIRKKPKPRKRGAHGGAATSGDSVTAPMQGTVVKVAVEEGQQVSAGDLVVVL EAMKMENPVTAHKDGTITGLAVEAGAAVTQGTVLAEIKSDGE >Mature_601_residues ASHASSKISKVLVANRGEIAVRVIRAAKDAGLQSVAVYAEPDADAPHVRLADEAFALGGQTSAESYLVFEKLLDAAEKSG ANAIHPGYGFLSENADFAQAVIDAGLIWIGPSPQSIRDLGDKVTARHIAARAQAPLVPGTPDPVKDADEVVAFAEEYGVP VAIKAAFGGGGRGMKVARTIQEIPELFDSATREAVAAFGRGECFVERYLDKPRHVEAQVIADQHGNVVVAGTRDCSLQRR FQKLVEEAPAPFLTDAQRKEIHESAKRICKEAGYYGAGTVEYLVGQDGLISFLEVNTRLQVEHPVTEETSGIDLVRQQFR IANGEPLDITEDPTPRGHSIEFRINGEDAGRGFLPAPGPVTTFEPPTGPGVRLDSGVESGSVIGGQFDSMLAKLIVTGAT REEALERSRRALAEFKVEGLATVIPFHRAVVSDPAFIGDENGFTVHTRWIETEWDNTIEPFTGGDPIDEEDTAPRQTVVV EVGGRRLEVSLPGDLVLGNGGGAAPAGVIRKKPKPRKRGAHGGAATSGDSVTAPMQGTVVKVAVEEGQQVSAGDLVVVLE AMKMENPVTAHKDGTITGLAVEAGAAVTQGTVLAEIKSDGE
Specific function: This protein carries two functions:biotin carboxyl carrier protein and biotin carboxyltransferase [H]
COG id: COG4770
COG function: function code I; Acetyl/propionyl-CoA carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI116805327, Length=445, Percent_Identity=45.8426966292135, Blast_Score=387, Evalue=1e-107, Organism=Homo sapiens, GI295821183, Length=636, Percent_Identity=36.7924528301887, Blast_Score=370, Evalue=1e-102, Organism=Homo sapiens, GI106049528, Length=450, Percent_Identity=44.8888888888889, Blast_Score=365, Evalue=1e-100, Organism=Homo sapiens, GI106049295, Length=450, Percent_Identity=44.8888888888889, Blast_Score=365, Evalue=1e-100, Organism=Homo sapiens, GI106049292, Length=450, Percent_Identity=44.8888888888889, Blast_Score=365, Evalue=1e-100, Organism=Homo sapiens, GI189095269, Length=431, Percent_Identity=42.92343387471, Blast_Score=354, Evalue=1e-97, Organism=Homo sapiens, GI65506442, Length=431, Percent_Identity=42.92343387471, Blast_Score=354, Evalue=2e-97, Organism=Homo sapiens, GI38679977, Length=475, Percent_Identity=33.2631578947368, Blast_Score=229, Evalue=8e-60, Organism=Homo sapiens, GI38679967, Length=475, Percent_Identity=33.2631578947368, Blast_Score=229, Evalue=8e-60, Organism=Homo sapiens, GI38679960, Length=475, Percent_Identity=33.2631578947368, Blast_Score=228, Evalue=9e-60, Organism=Homo sapiens, GI38679971, Length=475, Percent_Identity=33.2631578947368, Blast_Score=228, Evalue=9e-60, Organism=Homo sapiens, GI38679974, Length=475, Percent_Identity=33.2631578947368, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI134142062, Length=509, Percent_Identity=31.041257367387, Blast_Score=218, Evalue=1e-56, Organism=Escherichia coli, GI1789654, Length=441, Percent_Identity=46.2585034013605, Blast_Score=368, Evalue=1e-103, Organism=Caenorhabditis elegans, GI17562816, Length=437, Percent_Identity=46.4530892448513, Blast_Score=375, Evalue=1e-104, Organism=Caenorhabditis elegans, GI17567343, Length=433, Percent_Identity=43.4180138568129, Blast_Score=365, Evalue=1e-101, Organism=Caenorhabditis elegans, GI71987519, Length=431, Percent_Identity=44.7795823665893, Blast_Score=351, Evalue=6e-97, Organism=Caenorhabditis elegans, GI71997168, Length=513, Percent_Identity=28.2651072124756, Blast_Score=189, Evalue=5e-48, Organism=Caenorhabditis elegans, GI71997163, Length=513, Percent_Identity=28.2651072124756, Blast_Score=188, Evalue=6e-48, Organism=Caenorhabditis elegans, GI133931226, Length=458, Percent_Identity=29.0393013100437, Blast_Score=182, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6319695, Length=437, Percent_Identity=46.9107551487414, Blast_Score=375, Evalue=1e-105, Organism=Saccharomyces cerevisiae, GI6321376, Length=437, Percent_Identity=46.9107551487414, Blast_Score=367, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6319685, Length=428, Percent_Identity=41.3551401869159, Blast_Score=322, Evalue=9e-89, Organism=Saccharomyces cerevisiae, GI6323863, Length=443, Percent_Identity=30.4740406320542, Blast_Score=209, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6324343, Length=513, Percent_Identity=30.4093567251462, Blast_Score=204, Evalue=4e-53, Organism=Drosophila melanogaster, GI24651757, Length=468, Percent_Identity=43.8034188034188, Blast_Score=377, Evalue=1e-104, Organism=Drosophila melanogaster, GI281363050, Length=436, Percent_Identity=46.7889908256881, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24652224, Length=436, Percent_Identity=46.7889908256881, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24652222, Length=436, Percent_Identity=46.7889908256881, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24652220, Length=436, Percent_Identity=46.7889908256881, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24652218, Length=436, Percent_Identity=46.7889908256881, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24652212, Length=436, Percent_Identity=46.7889908256881, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24652210, Length=436, Percent_Identity=46.7889908256881, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24652214, Length=436, Percent_Identity=46.7889908256881, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI19921944, Length=436, Percent_Identity=46.7889908256881, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24652216, Length=436, Percent_Identity=46.7889908256881, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24651759, Length=418, Percent_Identity=43.0622009569378, Blast_Score=332, Evalue=6e-91, Organism=Drosophila melanogaster, GI161076407, Length=503, Percent_Identity=30.0198807157058, Blast_Score=208, Evalue=8e-54, Organism=Drosophila melanogaster, GI24586460, Length=503, Percent_Identity=30.0198807157058, Blast_Score=208, Evalue=8e-54, Organism=Drosophila melanogaster, GI161076409, Length=503, Percent_Identity=30.0198807157058, Blast_Score=208, Evalue=9e-54, Organism=Drosophila melanogaster, GI24586458, Length=503, Percent_Identity=30.0198807157058, Blast_Score=208, Evalue=9e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR001882 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR000089 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 - InterPro: IPR011053 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00364 Biotin_lipoyl; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14 [H]
Molecular weight: Translated: 63670; Mature: 63539
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASHASSKISKVLVANRGEIAVRVIRAAKDAGLQSVAVYAEPDADAPHVRLADEAFALGG CCCCHHHHHHHHHHCCCCCEEEHEEHHHHHCCCEEEEEEECCCCCCCCEEECHHHHHCCC QTSAESYLVFEKLLDAAEKSGANAIHPGYGFLSENADFAQAVIDAGLIWIGPSPQSIRDL CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEECCCCHHHHHH GDKVTARHIAARAQAPLVPGTPDPVKDADEVVAFAEEYGVPVAIKAAFGGGGRGMKVART HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH IQEIPELFDSATREAVAAFGRGECFVERYLDKPRHVEAQVIADQHGNVVVAGTRDCSLQR HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCHHHH RFQKLVEEAPAPFLTDAQRKEIHESAKRICKEAGYYGAGTVEYLVGQDGLISFLEVNTRL HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEECCEE QVEHPVTEETSGIDLVRQQFRIANGEPLDITEDPTPRGHSIEFRINGEDAGRGFLPAPGP EECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC VTTFEPPTGPGVRLDSGVESGSVIGGQFDSMLAKLIVTGATREEALERSRRALAEFKVEG CCCCCCCCCCCCEECCCCCCCCEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LATVIPFHRAVVSDPAFIGDENGFTVHTRWIETEWDNTIEPFTGGDPIDEEDTAPRQTVV HHHHHHHHHHHHCCCCEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEE VEVGGRRLEVSLPGDLVLGNGGGAAPAGVIRKKPKPRKRGAHGGAATSGDSVTAPMQGTV EEECCEEEEEECCCCEEEECCCCCCCHHHHCCCCCCHHCCCCCCCCCCCCCEECCCCCCE VKVAVEEGQQVSAGDLVVVLEAMKMENPVTAHKDGTITGLAVEAGAAVTQGTVLAEIKSD EEEEECCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCEEEEEEECCCCHHCCEEEEEECCC GE CC >Mature Secondary Structure ASHASSKISKVLVANRGEIAVRVIRAAKDAGLQSVAVYAEPDADAPHVRLADEAFALGG CCCHHHHHHHHHHCCCCCEEEHEEHHHHHCCCEEEEEEECCCCCCCCEEECHHHHHCCC QTSAESYLVFEKLLDAAEKSGANAIHPGYGFLSENADFAQAVIDAGLIWIGPSPQSIRDL CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEECCCCHHHHHH GDKVTARHIAARAQAPLVPGTPDPVKDADEVVAFAEEYGVPVAIKAAFGGGGRGMKVART HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH IQEIPELFDSATREAVAAFGRGECFVERYLDKPRHVEAQVIADQHGNVVVAGTRDCSLQR HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCHHHH RFQKLVEEAPAPFLTDAQRKEIHESAKRICKEAGYYGAGTVEYLVGQDGLISFLEVNTRL HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEECCEE QVEHPVTEETSGIDLVRQQFRIANGEPLDITEDPTPRGHSIEFRINGEDAGRGFLPAPGP EECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC VTTFEPPTGPGVRLDSGVESGSVIGGQFDSMLAKLIVTGATREEALERSRRALAEFKVEG CCCCCCCCCCCCEECCCCCCCCEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LATVIPFHRAVVSDPAFIGDENGFTVHTRWIETEWDNTIEPFTGGDPIDEEDTAPRQTVV HHHHHHHHHHHHCCCCEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEE VEVGGRRLEVSLPGDLVLGNGGGAAPAGVIRKKPKPRKRGAHGGAATSGDSVTAPMQGTV EEECCEEEEEECCCCEEEECCCCCCCHHHHCCCCCCHHCCCCCCCCCCCCCEECCCCCCE VKVAVEEGQQVSAGDLVVVLEAMKMENPVTAHKDGTITGLAVEAGAAVTQGTVLAEIKSD EEEEECCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCEEEEEEECCCCHHCCEEEEEECCC GE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7909542; 11234002 [H]