| Definition | Mycobacterium sp. KMS plasmid pMKMS02, complete sequence. |
|---|---|
| Accession | NC_008704 |
| Length | 216,763 |
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The map label for this gene is bedC2 [H]
Identifier: 119855240
GI number: 119855240
Start: 61887
End: 62429
Strand: Reverse
Name: bedC2 [H]
Synonym: Mkms_5854
Alternate gene names: 119855240
Gene position: 62429-61887 (Counterclockwise)
Preceding gene: 119855241
Following gene: 119855239
Centisome position: 28.8
GC content: 58.93
Gene sequence:
>543_bases ATGACGACAACGGTGCCGCAGGATCCACCTCAGGCTGCGAGGGTTTCGCGCGACGTGCGCGAGGAAATCGAAGACTTCCT TTTCGACGAGGCCGATCTGTTGGATCGCGATGAGTTCGAAGAGTGGCTGGAATTGCTGGCACCGGATGTGCACTATTTCG CGCGCGTCCGTCAGACGCTTCGCAGAGCAGGTGGCCCGGGGTTCTCTGAGCGCTCTATGCACCTGAGTGATAACTACACG AGTCTGAAGATGCGTATTCAGCGGCACCGAACGTCGTCGGATTGGGCTGAGGATCCTCCGTCGCGGATCCGGCACTACAT CACCAATGTCAGGGTCAGGTCTGGTGAGGACGGCGATGAGTACCGTGTGACGTCGAATGCGTTGCTGGTGCGCACACGCG CGGACGAAGCCAAGGCGGAGACAGTTTCTGCCGAGCGCCGAGACATTATTCGTCGCGACGAGACGGGTTTGAAACTGGTC CAGCGCGAGATCCTGCTGGATCACACCACGTTGCCCACGCACAACCTGTCATTCTGGATCTAA
Upstream 100 bases:
>100_bases CGGGACGACCGTTGGCCAGTGGCTACGCCGAACAGAATCAGCGCGAGTACTGGAAGCAGTACTTCGACTATCTGGCCACA CCGAGAAGGGATGAGAACGT
Downstream 100 bases:
>100_bases GGTGCCGGTGAGCTTGACATCATTACGGCGGCGCCTCCGCCGAAACTCCGGCCCACGAACGTTGTGGCCGAGCGAATTTG GGTCTGTCCTTAAGGTAGGC
Product: aromatic-ring-hydroxylating dioxygenase, beta subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTTTVPQDPPQAARVSRDVREEIEDFLFDEADLLDRDEFEEWLELLAPDVHYFARVRQTLRRAGGPGFSERSMHLSDNYT SLKMRIQRHRTSSDWAEDPPSRIRHYITNVRVRSGEDGDEYRVTSNALLVRTRADEAKAETVSAERRDIIRRDETGLKLV QREILLDHTTLPTHNLSFWI
Sequences:
>Translated_180_residues MTTTVPQDPPQAARVSRDVREEIEDFLFDEADLLDRDEFEEWLELLAPDVHYFARVRQTLRRAGGPGFSERSMHLSDNYT SLKMRIQRHRTSSDWAEDPPSRIRHYITNVRVRSGEDGDEYRVTSNALLVRTRADEAKAETVSAERRDIIRRDETGLKLV QREILLDHTTLPTHNLSFWI >Mature_179_residues TTTVPQDPPQAARVSRDVREEIEDFLFDEADLLDRDEFEEWLELLAPDVHYFARVRQTLRRAGGPGFSERSMHLSDNYTS LKMRIQRHRTSSDWAEDPPSRIRHYITNVRVRSGEDGDEYRVTSNALLVRTRADEAKAETVSAERRDIIRRDETGLKLVQ REILLDHTTLPTHNLSFWI
Specific function: The beta subunit may be responsible for the substrate specificity of the enzyme [H]
COG id: COG5517
COG function: function code Q; Small subunit of phenylpropionate dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family [H]
Homologues:
Organism=Escherichia coli, GI1788889, Length=169, Percent_Identity=32.5443786982249, Blast_Score=82, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000391 [H]
Pfam domain/function: PF00866 Ring_hydroxyl_B [H]
EC number: =1.14.12.3 [H]
Molecular weight: Translated: 21063; Mature: 20931
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTVPQDPPQAARVSRDVREEIEDFLFDEADLLDRDEFEEWLELLAPDVHYFARVRQTL CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH RRAGGPGFSERSMHLSDNYTSLKMRIQRHRTSSDWAEDPPSRIRHYITNVRVRSGEDGDE HHCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCEEECCCCCCC YRVTSNALLVRTRADEAKAETVSAERRDIIRRDETGLKLVQREILLDHTTLPTHNLSFWI EEEECCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEECC >Mature Secondary Structure TTTVPQDPPQAARVSRDVREEIEDFLFDEADLLDRDEFEEWLELLAPDVHYFARVRQTL CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH RRAGGPGFSERSMHLSDNYTSLKMRIQRHRTSSDWAEDPPSRIRHYITNVRVRSGEDGDE HHCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCEEECCCCCCC YRVTSNALLVRTRADEAKAETVSAERRDIIRRDETGLKLVQREILLDHTTLPTHNLSFWI EEEECCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8344526 [H]