Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yliJ [C]

Identifier: 119776680

GI number: 119776680

Start: 4180580

End: 4181233

Strand: Reverse

Name: yliJ [C]

Synonym: Sama_3548

Alternate gene names: 119776680

Gene position: 4181233-4180580 (Counterclockwise)

Preceding gene: 119776681

Following gene: 119776677

Centisome position: 97.1

GC content: 53.82

Gene sequence:

>654_bases
ATGGAGCTCTTTTACCACCCGTTGTCGCGATATTCCCAAAAAGTTCTGCTTGGATTGTATGAAAAGCAGGTCAACTTTTA
TCCCCGGGTCACTGAGCTCAGGGATCCCATACAACGTCAGACATTCAGCAAGATTTACCCTCCCTGCAAGCTGCCACTGC
TTAAATGCTCTGATGGCAGCCTGTTACCCGAATCGACCATCATCATCGAATACCTGGATCAACATATACCCGGCGGAACC
CGCCTGTTGCCAAAAGACAGCGCCGACTGCCTGAGGGTGCGTTTATGGGACAGGATTATCGATAACGACATCAGCAATCA
GCTGTTTTTGCTGGAGCAGCAATTGAGCATGGCACCTGAACATCGCAATGAGCTGGCCATGGCACAGGTCAAACAGCGTT
TGCTGCAGGTATTGGCCAGCATTGATGATGAACTGGCCAATTCCCATTGGTTGGTGGGGGATGGCTTTACCCTGGCTGAC
TGCGCCCTGGTGCCCTGTCTTGAACCCGCGTTTGAGCTTCTGTCCCTGCTGGAGTTGGAAAACCTCTGCCGTTACCGCCA
GCAGGCAAAAATCCGCGGCGCCTGGGAGCTGGTGGCCGAGGAGGCACAGCTCGCCGCCGCCGAAGAGACTAGCGGACTCA
AACTCATTCCTTAG

Upstream 100 bases:

>100_bases
AGAGTGCGGGTATTTCTCGACTTTCTGAAGGAGCGGTTGATCCAATCCCGCTAAAACCAACTAAATTAAACAAAGGGCGT
TTGATTGGGAGCCGGATTCC

Downstream 100 bases:

>100_bases
CTGTTACGCTCTTTCTTGAGCTGCAAAAAAGCCTTCCATTTCTGCACTTCGGGCGACAACTCAGGTGCGTCGCCTTCATA
GCCCGCTTCACGCACCAGTT

Product: glutathione S-transferase

Products: NA

Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Ta Family; Glutathione S-Transferase C-Terminal Domain Protein

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MELFYHPLSRYSQKVLLGLYEKQVNFYPRVTELRDPIQRQTFSKIYPPCKLPLLKCSDGSLLPESTIIIEYLDQHIPGGT
RLLPKDSADCLRVRLWDRIIDNDISNQLFLLEQQLSMAPEHRNELAMAQVKQRLLQVLASIDDELANSHWLVGDGFTLAD
CALVPCLEPAFELLSLLELENLCRYRQQAKIRGAWELVAEEAQLAAAEETSGLKLIP

Sequences:

>Translated_217_residues
MELFYHPLSRYSQKVLLGLYEKQVNFYPRVTELRDPIQRQTFSKIYPPCKLPLLKCSDGSLLPESTIIIEYLDQHIPGGT
RLLPKDSADCLRVRLWDRIIDNDISNQLFLLEQQLSMAPEHRNELAMAQVKQRLLQVLASIDDELANSHWLVGDGFTLAD
CALVPCLEPAFELLSLLELENLCRYRQQAKIRGAWELVAEEAQLAAAEETSGLKLIP
>Mature_217_residues
MELFYHPLSRYSQKVLLGLYEKQVNFYPRVTELRDPIQRQTFSKIYPPCKLPLLKCSDGSLLPESTIIIEYLDQHIPGGT
RLLPKDSADCLRVRLWDRIIDNDISNQLFLLEQQLSMAPEHRNELAMAQVKQRLLQVLASIDDELANSHWLVGDGFTLAD
CALVPCLEPAFELLSLLELENLCRYRQQAKIRGAWELVAEEAQLAAAEETSGLKLIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24789; Mature: 24789

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELFYHPLSRYSQKVLLGLYEKQVNFYPRVTELRDPIQRQTFSKIYPPCKLPLLKCSDGS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
LLPESTIIIEYLDQHIPGGTRLLPKDSADCLRVRLWDRIIDNDISNQLFLLEQQLSMAPE
CCCCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCH
HRNELAMAQVKQRLLQVLASIDDELANSHWLVGDGFTLADCALVPCLEPAFELLSLLELE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
NLCRYRQQAKIRGAWELVAEEAQLAAAEETSGLKLIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MELFYHPLSRYSQKVLLGLYEKQVNFYPRVTELRDPIQRQTFSKIYPPCKLPLLKCSDGS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
LLPESTIIIEYLDQHIPGGTRLLPKDSADCLRVRLWDRIIDNDISNQLFLLEQQLSMAPE
CCCCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCH
HRNELAMAQVKQRLLQVLASIDDELANSHWLVGDGFTLADCALVPCLEPAFELLSLLELE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
NLCRYRQQAKIRGAWELVAEEAQLAAAEETSGLKLIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA