Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is modB [H]

Identifier: 119776662

GI number: 119776662

Start: 4162881

End: 4163558

Strand: Direct

Name: modB [H]

Synonym: Sama_3530

Alternate gene names: 119776662

Gene position: 4162881-4163558 (Clockwise)

Preceding gene: 119776661

Following gene: 119776663

Centisome position: 96.67

GC content: 55.31

Gene sequence:

>678_bases
ATGGATTGGCAGTCGCTTTGGCTCTCAGGCAAACTGGCGCTGGTGACAGTGCTAATCCTCCTGCCACTGTGCGTATTTGC
CGGACGCGCCCTTGCCTACCATCAGTTCCGCGGTAAAAGCCTGATTGAGGCTCTCATCATGGTGCCACTGGTATTGCCCC
CTACAGTGGTAGGTTACTACCTGCTGGTCAGCTTCGGCAGCGAGAGTTGGCTCGGCCAATGGCTCAGAAATACCTTCGGC
ATTGAGCTGGTGTTCCATTTCTCTGGTCTGGTACTGGCATCAATCTTGGTCAATATCCCCTTTGCCTTGCAGCCCATACA
GCGGGCCTTCGAAGCCATTCCCGTGGATGTTCGCGACGCGGCTGCCTGTTGTGGCATGAGTAAAAGTAAAATCCTCACCC
GTATTGAACTGCCGATGATCTGGCCCGGCCTGGTCACGGCGTTGGTGCTCACCTTCTCCCATGTACTGGGAGAATTTGGT
GTGGTGCTGATGATGGGTGGCAATATCAGCGGCGAAACCAAAACCATCTCCATCGCCATCTACGACAGCGTCCAGGCGTT
TGACTTTGATGCCGCCGGGATCATGTCACTTATCCTGCTGCTTTTTGCCATCAGTGCCCTGGCGCTGACGACCAGTCTTT
CTCGTCGAATGGGAGGTCAGCATGAGCGGCAGCACTGA

Upstream 100 bases:

>100_bases
CCGCCAATGCATTTTATGTGTATTTACAGGGTGACGAGGCACGTAAAGTCTTCGCCGACTATGGTTTCTCACTGCCACCA
AAGGCACACGGAGCGCCCTG

Downstream 100 bases:

>100_bases
GCTTCGGGTCCAGATTAGGCAAACCAAAGGCATACGTATCGAGGCCGATTTTAGCTGCCGTGCCGGTGAATTTTTGGCTG
TGGTTGGGCCTTCGGGGGGC

Product: molybdenum ABC transporter permease

Products: ADP; phosphate; MoO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MDWQSLWLSGKLALVTVLILLPLCVFAGRALAYHQFRGKSLIEALIMVPLVLPPTVVGYYLLVSFGSESWLGQWLRNTFG
IELVFHFSGLVLASILVNIPFALQPIQRAFEAIPVDVRDAAACCGMSKSKILTRIELPMIWPGLVTALVLTFSHVLGEFG
VVLMMGGNISGETKTISIAIYDSVQAFDFDAAGIMSLILLLFAISALALTTSLSRRMGGQHERQH

Sequences:

>Translated_225_residues
MDWQSLWLSGKLALVTVLILLPLCVFAGRALAYHQFRGKSLIEALIMVPLVLPPTVVGYYLLVSFGSESWLGQWLRNTFG
IELVFHFSGLVLASILVNIPFALQPIQRAFEAIPVDVRDAAACCGMSKSKILTRIELPMIWPGLVTALVLTFSHVLGEFG
VVLMMGGNISGETKTISIAIYDSVQAFDFDAAGIMSLILLLFAISALALTTSLSRRMGGQHERQH
>Mature_225_residues
MDWQSLWLSGKLALVTVLILLPLCVFAGRALAYHQFRGKSLIEALIMVPLVLPPTVVGYYLLVSFGSESWLGQWLRNTFG
IELVFHFSGLVLASILVNIPFALQPIQRAFEAIPVDVRDAAACCGMSKSKILTRIELPMIWPGLVTALVLTFSHVLGEFG
VVLMMGGNISGETKTISIAIYDSVQAFDFDAAGIMSLILLLFAISALALTTSLSRRMGGQHERQH

Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4149

COG function: function code P; ABC-type molybdate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786980, Length=184, Percent_Identity=38.5869565217391, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1788764, Length=188, Percent_Identity=30.3191489361702, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI87082099, Length=220, Percent_Identity=28.6363636363636, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1786254, Length=229, Percent_Identity=26.6375545851528, Blast_Score=74, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR011867 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24593; Mature: 24593

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWQSLWLSGKLALVTVLILLPLCVFAGRALAYHQFRGKSLIEALIMVPLVLPPTVVGYY
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHH
LLVSFGSESWLGQWLRNTFGIELVFHFSGLVLASILVNIPFALQPIQRAFEAIPVDVRDA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHH
AACCGMSKSKILTRIELPMIWPGLVTALVLTFSHVLGEFGVVLMMGGNISGETKTISIAI
HHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEE
YDSVQAFDFDAAGIMSLILLLFAISALALTTSLSRRMGGQHERQH
ECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDWQSLWLSGKLALVTVLILLPLCVFAGRALAYHQFRGKSLIEALIMVPLVLPPTVVGYY
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHH
LLVSFGSESWLGQWLRNTFGIELVFHFSGLVLASILVNIPFALQPIQRAFEAIPVDVRDA
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHH
AACCGMSKSKILTRIELPMIWPGLVTALVLTFSHVLGEFGVVLMMGGNISGETKTISIAI
HHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEE
YDSVQAFDFDAAGIMSLILLLFAISALALTTSLSRRMGGQHERQH
ECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; MoO42- [Periplasm]; H2O [C]

Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8384683; 7665518 [H]