Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776648

Identifier: 119776648

GI number: 119776648

Start: 4150616

End: 4151038

Strand: Direct

Name: 119776648

Synonym: Sama_3516

Alternate gene names: NA

Gene position: 4150616-4151038 (Clockwise)

Preceding gene: 119776647

Following gene: 119776649

Centisome position: 96.39

GC content: 55.56

Gene sequence:

>423_bases
ATGACTGATTTCAGGGTTACCAGCACACTTGCCGACATGAACCTGTCCGTCATCCACGGCTTCTTACAACATTCCTATTG
GGCCAAAGGGATCCCGGAAGCCACATTACGCCGCGCCCTGGAAAATAGCCTCTGTTTCGGGCTCTTCTGCGGAAGTGACC
AAATTGGCTTTGCGCGTATGATCACCGATAAGGCAACCTTCGCGTATCTGGCCGATGTTTTTGTGCTGGAAAGCCACCGC
GGACGAGGCGGCTCCAAGGTACTGATGCAGGCCGTGATGGCGCATCCAGAACTCACCGGGCTACGACGCATGATGCTGGC
CACCAGCGATGCACATGGTCTGTATCGTCAGTTTGGTTTTACCGACCTGGGCAACCCGGGGATCATGATGGAGATACACC
GCCCGAACGTATACCAGCCCTGA

Upstream 100 bases:

>100_bases
CCCGATGCATTTGAAGTGGCTGTGGTGTATGAAATTCAAGACGGTCTTATCCAAACTCTGTGGAGTTTTGGCGCAGACAA
AATTCAGGGAATACCCAGTC

Downstream 100 bases:

>100_bases
TTCGTTCGACTTCAAGGCGGATTTCGGCTACGTATTTGTCGTCGTAGTCCAAACGTTCAAATTCCTCGAGGCAGGCCAGG
TACATCGCCAGCCTGCGCTC

Product: histone acetyltransferase HPA2/related acetyltransferase

Products: NA

Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; GCN5-Like N-Acetyltransferase; Gcn5-Related N-Acetyltransferase; GCN5-Related N-Acetyltransferase Protein; Histone Acetyltransferase HPA2/Related Acetyltransferase; Acetyltransferase Domain-Containing Protein; N-Acetylglutamate Synthase; Acetyltransferase GNAT Family Protein; GCN5 N-Acetyltransferase; Acetyltransferase Family Protein; Acetyltransferase GCN5-Related; Acetyltransferase Gnat Family; Spermine/Spermidine Acetyltransferase; N-Acetyltransferase Gnat Family Protein; GCN5-Related Protein N-Acetyltransferase

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTDFRVTSTLADMNLSVIHGFLQHSYWAKGIPEATLRRALENSLCFGLFCGSDQIGFARMITDKATFAYLADVFVLESHR
GRGGSKVLMQAVMAHPELTGLRRMMLATSDAHGLYRQFGFTDLGNPGIMMEIHRPNVYQP

Sequences:

>Translated_140_residues
MTDFRVTSTLADMNLSVIHGFLQHSYWAKGIPEATLRRALENSLCFGLFCGSDQIGFARMITDKATFAYLADVFVLESHR
GRGGSKVLMQAVMAHPELTGLRRMMLATSDAHGLYRQFGFTDLGNPGIMMEIHRPNVYQP
>Mature_139_residues
TDFRVTSTLADMNLSVIHGFLQHSYWAKGIPEATLRRALENSLCFGLFCGSDQIGFARMITDKATFAYLADVFVLESHRG
RGGSKVLMQAVMAHPELTGLRRMMLATSDAHGLYRQFGFTDLGNPGIMMEIHRPNVYQP

Specific function: Unknown

COG id: COG0454

COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15643; Mature: 15512

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFRVTSTLADMNLSVIHGFLQHSYWAKGIPEATLRRALENSLCFGLFCGSDQIGFARM
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHH
ITDKATFAYLADVFVLESHRGRGGSKVLMQAVMAHPELTGLRRMMLATSDAHGLYRQFGF
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCC
TDLGNPGIMMEIHRPNVYQP
CCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
TDFRVTSTLADMNLSVIHGFLQHSYWAKGIPEATLRRALENSLCFGLFCGSDQIGFARM
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHH
ITDKATFAYLADVFVLESHRGRGGSKVLMQAVMAHPELTGLRRMMLATSDAHGLYRQFGF
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCC
TDLGNPGIMMEIHRPNVYQP
CCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA