Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776635

Identifier: 119776635

GI number: 119776635

Start: 4135123

End: 4137618

Strand: Direct

Name: 119776635

Synonym: Sama_3503

Alternate gene names: NA

Gene position: 4135123-4137618 (Clockwise)

Preceding gene: 119776633

Following gene: 119776637

Centisome position: 96.03

GC content: 55.29

Gene sequence:

>2496_bases
ATGTCATTTCTGTCGATTTTCGCCTCCCTTGGCAGGGCACTTTGTTACTGCATGTGCCTCTCGCTGCCCCTCACCGCATA
CGCTACCTCTTTGGAAGCCTATCTGGGTTATCCCCTGGGGGAATGGCACGTCAGACACGATCAGGTGAATGGCTTTCTGG
AAAAACTGGCCGCTGACAATCCCAGAGTCTCACTGGAGGATACAGGCTACAGCCATGAAAGGCGCAGGCAACTGACGGCG
GTAATCACCTCACCAGCCAATCAGGACCGACTCAACGGGATTGTGGCCGACAGGGCGCTGGTCAAACAGGGGAAAGCGCA
GCCAATGTTGGTGATATGGCTGGCGTATTCAATTCATGGCGATGAAGCCAGTGGTGCCCATGCCGCTTTGGCGCTGGCGC
AGCATTTGGCATTGAGCCAGGAGAGCTGGATTACCGACCTGCTCAGCCAGAGTGTGGTACTTATCACCCCCAGCCAAAAC
CCCGATGGACTCGACCGTTTTGCCAACTGGTCCAACAGCTACCGTGGGATAGCTGTGCCTGTGGCGGATGAAAACCATAA
GGAACACAATCAAAACTGGCCTGCCGGACGCTATAACCATTTTCTGGCCGACCTCAACCGTGACTGGCTGTTCTTACGAC
ATCCGGAGAGCCGGGGCAGGGTCGCATTACTCCATAAGTGGCAACCTCAGTATGTGGGGGACTTCCATGAAATGGGTCAT
AACCAAAGCTACTTTTTCCAGCCCGGCGTCCCCGAGCGCACGCACCCACTGACAGAACAACGAAACCAGCAACTGACTGA
GAAATTAGCCCATTTTTACCGTCAGGCTCTGGATGCCAAGCAGCAGGCCTACTTTAGCCGGCAGGGATTCGATGATTTCT
TCTATGGCAAAGGCTCCACCTATCCGGACATCAATGGCGCCGTAGGGGTATTGTTCGAGCAGGCCAGCGCCCGCGGCCAG
GTACAGGACTCGCAATACGGTGGTATCAGCCTGGCCGAGGCCATCGATAATCAGTTAACCACCTCCCTTGCTGCACTCAA
AGGCGCTCACCAACTCCGCCAGGAACTCATCAGTTTTCAAAACGATTTTTACGCTGGTAAAGGTAAAACCGGTAAACAGG
GTCGCCTGATCTCGACCCGGGGAGACAGACAGCGACTGCTGGTATTGGCTGATCTCCTGAACCGCCATGGCGTGGTTTAC
CGCTATCTGACGCAGGACATGAAAGAAGGCAAACAAATATTCACAGCTGCTGATAGTCTGTTCATTCCCAACGAACAGCC
TCAGTCTGTTTTGGTAGAAGCCCTGTTTGAGCGACGCACCCGATTTGAAGACCCCACCTTCTACGATGTCAGCGCCTGGG
ATCTGGGCAGCGCCTTCAATCTGGCCATCGCAGAGAACATACGGCCTGCTGCGAACCAGCTCAGCACAGATGCACCAGCG
TTTGGGCAGCCGGCACTGACAGAAGACACGGTTGCCCTCCTGATAGACTGGCAGCAAAGTGGCGCGGCCCCTTTGTTGGC
GCAGCTTCACCGGGATGGCATAGCCGTCAGGGCCTCGGTAAAACCCTTTACTCCCGTGGCCAGCGCCCGTGCATTTGCCG
CTGGCACCCTGATGATAAGTACAGCCCAGAAGCAAATGACGCGGGACGCATTACTGCCTTATCTCACCGACCTTGCCAGG
CAATATGAGGTCCGCCTGTTCCCGGTCGTTTCATTCGCTTCCGCAACAGGAATTGATCTTGGCAGTGGCGACTTTGTCCC
ACTCAAGCCAGTGAACGCCTTATTGGTGAGCGGTCGTGGCACCGATGCCACCGAGGTGGGGGAAATCTGGCGCTATTTGG
ATTTGGAGCTGAAACAGGGCGTGACTCTGGTGGACTCAGACAGACTGGCACGGATTAGCCTTAACCGTTACAGCCATATA
CTGCTCGCAGACGGAAATTATGATCACCTGGACGATGCCCTTGGACGCAAACTCGGTGAGTTTGCCGAACAGGGCGGCGT
CATTGTGGCCCAGAAGCGGGCACTCATTTGGCTCAATAAACGCAACCTGCTCAGAAACACAGTATTGGAAGACGGGTTTT
ATAAGCAGCAGTTTTCCACGGCTGGGCTTGGCTTTGATGACAAAGAAGCCCTGCGTGCCCGCCAGGCCATTGGTGGCGCC
ATACTCAACTGGCAACTGGATCCGGCTCATCCACTGGCATTCGGCATGCCATCTGCCACTGTGCCCGTGATGAAAAATGA
AGTACTGGGCTTATCCGACACCAGCGAGCCATTTGTTATCGCCGCACGCTATCCACAAAACCCGCTGGTCTCCGGCTACC
TCTCTGACGAATACCAAAGGGCATTCGGTCTGAGCAATGCCCTCTTGGCAGAGCCCAAGGGTAAGGGCGTCGTGGTGGGA
ACAACCGATAACCTGCTGTTTCGCAACATCTGGCTCGGCACTGAAAAAATCTACACCAATGCGCTCTACCTGTTACCTGC
GGCCATGAGCCGCTAA

Upstream 100 bases:

>100_bases
TCTCACTGTACGCCTTCCAGGATAGTTAAGCCTTGGTGGTCAATGAATCAACAAACTGCTAATTTGTTCAGCAATACAAA
AAGATAATAAAGAGTAGAAC

Downstream 100 bases:

>100_bases
CTGAACGTGTCCAGCAGCCCGGGGGCTTCCGCCCGGGCAAGACACCATACCTGCACCCTGACACCCTGAAGCTGTAACAT
GGTGGCTATTTCATTGGCCG

Product: peptidase M14, carboxypeptidase A

Products: NA

Alternate protein names: Zinc-Dependent Carboxypeptidase Domain-Containing Protein; Zinc Carboxypeptidase; Zinc-Dependent Carboxypeptidase Domain-Conatining Protein; Deacylase/Carboxypeptidase Superfamily Protein; Zinc Carboxypeptidase Family; M14 Family Peptidase

Number of amino acids: Translated: 831; Mature: 830

Protein sequence:

>831_residues
MSFLSIFASLGRALCYCMCLSLPLTAYATSLEAYLGYPLGEWHVRHDQVNGFLEKLAADNPRVSLEDTGYSHERRRQLTA
VITSPANQDRLNGIVADRALVKQGKAQPMLVIWLAYSIHGDEASGAHAALALAQHLALSQESWITDLLSQSVVLITPSQN
PDGLDRFANWSNSYRGIAVPVADENHKEHNQNWPAGRYNHFLADLNRDWLFLRHPESRGRVALLHKWQPQYVGDFHEMGH
NQSYFFQPGVPERTHPLTEQRNQQLTEKLAHFYRQALDAKQQAYFSRQGFDDFFYGKGSTYPDINGAVGVLFEQASARGQ
VQDSQYGGISLAEAIDNQLTTSLAALKGAHQLRQELISFQNDFYAGKGKTGKQGRLISTRGDRQRLLVLADLLNRHGVVY
RYLTQDMKEGKQIFTAADSLFIPNEQPQSVLVEALFERRTRFEDPTFYDVSAWDLGSAFNLAIAENIRPAANQLSTDAPA
FGQPALTEDTVALLIDWQQSGAAPLLAQLHRDGIAVRASVKPFTPVASARAFAAGTLMISTAQKQMTRDALLPYLTDLAR
QYEVRLFPVVSFASATGIDLGSGDFVPLKPVNALLVSGRGTDATEVGEIWRYLDLELKQGVTLVDSDRLARISLNRYSHI
LLADGNYDHLDDALGRKLGEFAEQGGVIVAQKRALIWLNKRNLLRNTVLEDGFYKQQFSTAGLGFDDKEALRARQAIGGA
ILNWQLDPAHPLAFGMPSATVPVMKNEVLGLSDTSEPFVIAARYPQNPLVSGYLSDEYQRAFGLSNALLAEPKGKGVVVG
TTDNLLFRNIWLGTEKIYTNALYLLPAAMSR

Sequences:

>Translated_831_residues
MSFLSIFASLGRALCYCMCLSLPLTAYATSLEAYLGYPLGEWHVRHDQVNGFLEKLAADNPRVSLEDTGYSHERRRQLTA
VITSPANQDRLNGIVADRALVKQGKAQPMLVIWLAYSIHGDEASGAHAALALAQHLALSQESWITDLLSQSVVLITPSQN
PDGLDRFANWSNSYRGIAVPVADENHKEHNQNWPAGRYNHFLADLNRDWLFLRHPESRGRVALLHKWQPQYVGDFHEMGH
NQSYFFQPGVPERTHPLTEQRNQQLTEKLAHFYRQALDAKQQAYFSRQGFDDFFYGKGSTYPDINGAVGVLFEQASARGQ
VQDSQYGGISLAEAIDNQLTTSLAALKGAHQLRQELISFQNDFYAGKGKTGKQGRLISTRGDRQRLLVLADLLNRHGVVY
RYLTQDMKEGKQIFTAADSLFIPNEQPQSVLVEALFERRTRFEDPTFYDVSAWDLGSAFNLAIAENIRPAANQLSTDAPA
FGQPALTEDTVALLIDWQQSGAAPLLAQLHRDGIAVRASVKPFTPVASARAFAAGTLMISTAQKQMTRDALLPYLTDLAR
QYEVRLFPVVSFASATGIDLGSGDFVPLKPVNALLVSGRGTDATEVGEIWRYLDLELKQGVTLVDSDRLARISLNRYSHI
LLADGNYDHLDDALGRKLGEFAEQGGVIVAQKRALIWLNKRNLLRNTVLEDGFYKQQFSTAGLGFDDKEALRARQAIGGA
ILNWQLDPAHPLAFGMPSATVPVMKNEVLGLSDTSEPFVIAARYPQNPLVSGYLSDEYQRAFGLSNALLAEPKGKGVVVG
TTDNLLFRNIWLGTEKIYTNALYLLPAAMSR
>Mature_830_residues
SFLSIFASLGRALCYCMCLSLPLTAYATSLEAYLGYPLGEWHVRHDQVNGFLEKLAADNPRVSLEDTGYSHERRRQLTAV
ITSPANQDRLNGIVADRALVKQGKAQPMLVIWLAYSIHGDEASGAHAALALAQHLALSQESWITDLLSQSVVLITPSQNP
DGLDRFANWSNSYRGIAVPVADENHKEHNQNWPAGRYNHFLADLNRDWLFLRHPESRGRVALLHKWQPQYVGDFHEMGHN
QSYFFQPGVPERTHPLTEQRNQQLTEKLAHFYRQALDAKQQAYFSRQGFDDFFYGKGSTYPDINGAVGVLFEQASARGQV
QDSQYGGISLAEAIDNQLTTSLAALKGAHQLRQELISFQNDFYAGKGKTGKQGRLISTRGDRQRLLVLADLLNRHGVVYR
YLTQDMKEGKQIFTAADSLFIPNEQPQSVLVEALFERRTRFEDPTFYDVSAWDLGSAFNLAIAENIRPAANQLSTDAPAF
GQPALTEDTVALLIDWQQSGAAPLLAQLHRDGIAVRASVKPFTPVASARAFAAGTLMISTAQKQMTRDALLPYLTDLARQ
YEVRLFPVVSFASATGIDLGSGDFVPLKPVNALLVSGRGTDATEVGEIWRYLDLELKQGVTLVDSDRLARISLNRYSHIL
LADGNYDHLDDALGRKLGEFAEQGGVIVAQKRALIWLNKRNLLRNTVLEDGFYKQQFSTAGLGFDDKEALRARQAIGGAI
LNWQLDPAHPLAFGMPSATVPVMKNEVLGLSDTSEPFVIAARYPQNPLVSGYLSDEYQRAFGLSNALLAEPKGKGVVVGT
TDNLLFRNIWLGTEKIYTNALYLLPAAMSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92155; Mature: 92024

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS00142 ZINC_PROTEASE ; PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLSIFASLGRALCYCMCLSLPLTAYATSLEAYLGYPLGEWHVRHDQVNGFLEKLAADN
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHCCCC
PRVSLEDTGYSHERRRQLTAVITSPANQDRLNGIVADRALVKQGKAQPMLVIWLAYSIHG
CCEEEECCCCCHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECC
DEASGAHAALALAQHLALSQESWITDLLSQSVVLITPSQNPDGLDRFANWSNSYRGIAVP
CCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEE
VADENHKEHNQNWPAGRYNHFLADLNRDWLFLRHPESRGRVALLHKWQPQYVGDFHEMGH
ECCCCCHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCCCHHHHCCC
NQSYFFQPGVPERTHPLTEQRNQQLTEKLAHFYRQALDAKQQAYFSRQGFDDFFYGKGST
CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCC
YPDINGAVGVLFEQASARGQVQDSQYGGISLAEAIDNQLTTSLAALKGAHQLRQELISFQ
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NDFYAGKGKTGKQGRLISTRGDRQRLLVLADLLNRHGVVYRYLTQDMKEGKQIFTAADSL
CCEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCE
FIPNEQPQSVLVEALFERRTRFEDPTFYDVSAWDLGSAFNLAIAENIRPAANQLSTDAPA
ECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEHHHHCCCHHHHHCCCCCCC
FGQPALTEDTVALLIDWQQSGAAPLLAQLHRDGIAVRASVKPFTPVASARAFAAGTLMIS
CCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHEEEE
TAQKQMTRDALLPYLTDLARQYEVRLFPVVSFASATGIDLGSGDFVPLKPVNALLVSGRG
HHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCCEEECCCCCEEEEECCC
TDATEVGEIWRYLDLELKQGVTLVDSDRLARISLNRYSHILLADGNYDHLDDALGRKLGE
CCHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHH
FAEQGGVIVAQKRALIWLNKRNLLRNTVLEDGFYKQQFSTAGLGFDDKEALRARQAIGGA
HHHHCCEEEEECCEEEEECCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCE
ILNWQLDPAHPLAFGMPSATVPVMKNEVLGLSDTSEPFVIAARYPQNPLVSGYLSDEYQR
EEEEECCCCCCCEECCCCCCCCHHHCCEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHH
AFGLSNALLAEPKGKGVVVGTTDNLLFRNIWLGTEKIYTNALYLLPAAMSR
HHCCCCHHEECCCCCEEEEECCCCEEEHHEECCHHHHHHHHHHEHHHHHCC
>Mature Secondary Structure 
SFLSIFASLGRALCYCMCLSLPLTAYATSLEAYLGYPLGEWHVRHDQVNGFLEKLAADN
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHCCCC
PRVSLEDTGYSHERRRQLTAVITSPANQDRLNGIVADRALVKQGKAQPMLVIWLAYSIHG
CCEEEECCCCCHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECC
DEASGAHAALALAQHLALSQESWITDLLSQSVVLITPSQNPDGLDRFANWSNSYRGIAVP
CCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEE
VADENHKEHNQNWPAGRYNHFLADLNRDWLFLRHPESRGRVALLHKWQPQYVGDFHEMGH
ECCCCCHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCCCHHHHCCC
NQSYFFQPGVPERTHPLTEQRNQQLTEKLAHFYRQALDAKQQAYFSRQGFDDFFYGKGST
CCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCC
YPDINGAVGVLFEQASARGQVQDSQYGGISLAEAIDNQLTTSLAALKGAHQLRQELISFQ
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NDFYAGKGKTGKQGRLISTRGDRQRLLVLADLLNRHGVVYRYLTQDMKEGKQIFTAADSL
CCEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCE
FIPNEQPQSVLVEALFERRTRFEDPTFYDVSAWDLGSAFNLAIAENIRPAANQLSTDAPA
ECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEHHHHCCCHHHHHCCCCCCC
FGQPALTEDTVALLIDWQQSGAAPLLAQLHRDGIAVRASVKPFTPVASARAFAAGTLMIS
CCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHEEEE
TAQKQMTRDALLPYLTDLARQYEVRLFPVVSFASATGIDLGSGDFVPLKPVNALLVSGRG
HHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCCEEECCCCCEEEEECCC
TDATEVGEIWRYLDLELKQGVTLVDSDRLARISLNRYSHILLADGNYDHLDDALGRKLGE
CCHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHH
FAEQGGVIVAQKRALIWLNKRNLLRNTVLEDGFYKQQFSTAGLGFDDKEALRARQAIGGA
HHHHCCEEEEECCEEEEECCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCE
ILNWQLDPAHPLAFGMPSATVPVMKNEVLGLSDTSEPFVIAARYPQNPLVSGYLSDEYQR
EEEEECCCCCCCEECCCCCCCCHHHCCEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHH
AFGLSNALLAEPKGKGVVVGTTDNLLFRNIWLGTEKIYTNALYLLPAAMSR
HHCCCCHHEECCCCCEEEEECCCCEEEHHEECCHHHHHHHHHHEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA