| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is cyaA [H]
Identifier: 119776385
GI number: 119776385
Start: 3846202
End: 3848631
Strand: Reverse
Name: cyaA [H]
Synonym: Sama_3253
Alternate gene names: 119776385
Gene position: 3848631-3846202 (Counterclockwise)
Preceding gene: 119776398
Following gene: 119776383
Centisome position: 89.38
GC content: 54.12
Gene sequence:
>2430_bases ATGATCGCGCACAGTCGGTGGTCAACATCTGCTTTGAGCTTGTCAGACCGCCTCAACAAGGTCCGACTGGCCCGGGCCCT GGCCCTGCTTTCTCCCCTCAAACGGCATCTTCTTCACGCGATCCCGCTGTTGCTGCACTTTCACGGCCCTCGAATTCCCG GCTACAACGGCCATGCCACACCCTGTGGGCTGGCAGGTTTTGAACCCCAGGAACCCCATCTGGAAGCCGCCAGGGTATTG TCTCTTGGACTTCCCAGCCTGCGTGCCGACTGGCCTTATGCCATCGAAGGTATTTATGCCATGGGCAGTACCGGTAGCTT CGGACAAAACCCCTTCAGCGACGTTGATGTGTGGGTTATCCACGAGCCTAATTTATCGGCCGATGACATTCAGGCACTGG CCGATAAGTTGGTGCTCTTACATCAATGGTTTGCGGGCTTTGAGTTTGAGGTGAACTTTTATTTGGTGCATCCGTTTCAA TTTCGAGCCGACAAAAGTTATTCGGGTAACGGGCGGGTAAGGCTGGGGGTGGAACACAGTGGCAGTGCCCAGCACTGGCT GCTCCTGGAAGAGTTTTACCGCACCCAAATTTGCCTCGGTGGCAAGCCTTTGTATTGGTGGCCCGATGCCCGGCCCAGCA GTGACGGCCTCTGGTTGGGGGATGTACAAAGCTTGCCCGCCAGCGAGTATTTCAGTGCCTCCCTGTGGCAGCTCTACAAG GGGTTGGTCAAACCCCACAAGGCATTACTCAAGGTGTTGCTGCTTGAGGCCTACGCCTGGCGTTACCCCAATACAGAGCA ATTGAGTACCAGGGTATGGCTTCACACGACCAAGGGGGATTTTTCCACTGCCAACGACCCTTACTTCTTATTGTACGAGG CGATAGAGGAATATTTGCTTGCGATAGAAGATCACCGGCGGCTTGAGATTGTTAGGCGCTGCTTCTATCTCAAGTGCGCC GTTCGCTTAAGCCATCCCCAGCAACCGAAGGATTGGCGCTACCTGAAAATGCAGTTGTTGGTGTCAGCCTGGGAGTGGCC AGATGCCCTTATTCAGACTCTGGATGACTGTGAAGATTGGCACACGGGGCAACTTCAGTGGTTCAATGCTCAGTTGAATG AATTGATGCTGGTAAGCTATCAGAAGCTGCTGCGCTTTGCAGCCAACCACGGCGTTAATGAGGGGCTCAGGGTCGAAGAT CTGGGCATGCTCACCCGTAAGCTGCATACCTGCTTTAATGAAGACAAACATCTGGTTTCCAAGTTGAATCCGCTCTGGAG CAGCCGCTTGCAAGAACCGGTGCTAACTGTCATCACCAGCCAGTCTGATGGAACCCACTACCTCTATCGTCAGGAGCCAC AGGCGTCGGCATTAAAGGGTGAAGCGGCAGTGTATGTGGCAGACAACCTCGCGTCGCTGCTGCTCTGGGCGTGTATAAAC CAGGTGTGTGATGACCAGACCCAGTGGTTCAGTTACGGGGAGCGCAGGTTGGGTGCACGCCTTGCGGCCACAGATAAACG TTTGCGTGAGGCAATTAAGGATACAGAGCTTAAGGTATCCAAGCAGGATCTCTGTCAGCCCTGGCACTATCGAAAGCTGG TGTTAGTGGTCAACCTTGAACATGACCCCACCCCCGATTGGCCAGGGCAGGAAGTTCTGGTGGATATCATGAATGCGAAC CTCTTTTCTCTGGGGCGTAAGCAGCTCAACATGCTGGGCTCGCTGGATGTGCTGTCATTCAATTCCTGGGGCGAGTGGCA TGCACACCATTTTGAAGGGGAGCAGGCACTTCTAAAGGCCATGACCTTTTTGGCACCGGGGATCCGCAGGGCAGCGGGCA GGCTGGATCTGCGGACCCTGGGCTGCAGCGCCCGGTTAACCTTTCAGCTGGAGTTGGCGGTACATTCATTGCTGAAACAG GTTGCTAAGCTGAGTTGTCAGGCAAGCGCTTCATCAACCCTGGTACAGCCTCTGCGCATAGGTAACCGAAACTACGGACT CTTCTTTAATACCCTGGGCGTGGCCTACGAAGACCTTGCGGATGCGCCATCAATATACAAACAGATGAGCCGTGGTCATT TACTGTCTATCCCCAGGCCTGAATTGGGCGACGATCCGTTCGCCAGTGTGCCTGAGCTAATTCAGGACTATGCCACTGAG GATGTTATTCAGTATTTCCTGAGGCCGAGGGAAGAGGGGATTGATGTCTTTATTCTCAATCACAAAAACGAAATCAGTCA CTATGTCCAGCATGGCACCACGGTGGAGGCTCTGGTGAGCAAAGTGAGCCAGCAACATGCCTTTGAGGGGCTTTACGAGA TGCATGGCCGCTTTAATTTGCCGCAGTTTTTTCAGTTGGTGAGGATGCAGGGCGAACTGAAGGCCCAACCTGTGGGGATG GTGAGGGAAGATATGGGGGCCGAGTTCTAG
Upstream 100 bases:
>100_bases CTGTCGGTAAAAATGTGATCTCTATCGCAAATGTTTGCGTTCGCCCTCTTGGGTGCTAGCATGGGGTAACTTTAAGTCCA AGGAATGGTGACGCAACAAG
Downstream 100 bases:
>100_bases CCCCCAACTGACGCTGTGATCTGCTTACCAGCACAGGTCCAGATTGGCCTGGCGCTTGATGGATTCTTTCAAAAACGGCA TAAATTCGGCACCGCCGTTA
Product: adenylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase; Adenylyl cyclase [H]
Number of amino acids: Translated: 809; Mature: 809
Protein sequence:
>809_residues MIAHSRWSTSALSLSDRLNKVRLARALALLSPLKRHLLHAIPLLLHFHGPRIPGYNGHATPCGLAGFEPQEPHLEAARVL SLGLPSLRADWPYAIEGIYAMGSTGSFGQNPFSDVDVWVIHEPNLSADDIQALADKLVLLHQWFAGFEFEVNFYLVHPFQ FRADKSYSGNGRVRLGVEHSGSAQHWLLLEEFYRTQICLGGKPLYWWPDARPSSDGLWLGDVQSLPASEYFSASLWQLYK GLVKPHKALLKVLLLEAYAWRYPNTEQLSTRVWLHTTKGDFSTANDPYFLLYEAIEEYLLAIEDHRRLEIVRRCFYLKCA VRLSHPQQPKDWRYLKMQLLVSAWEWPDALIQTLDDCEDWHTGQLQWFNAQLNELMLVSYQKLLRFAANHGVNEGLRVED LGMLTRKLHTCFNEDKHLVSKLNPLWSSRLQEPVLTVITSQSDGTHYLYRQEPQASALKGEAAVYVADNLASLLLWACIN QVCDDQTQWFSYGERRLGARLAATDKRLREAIKDTELKVSKQDLCQPWHYRKLVLVVNLEHDPTPDWPGQEVLVDIMNAN LFSLGRKQLNMLGSLDVLSFNSWGEWHAHHFEGEQALLKAMTFLAPGIRRAAGRLDLRTLGCSARLTFQLELAVHSLLKQ VAKLSCQASASSTLVQPLRIGNRNYGLFFNTLGVAYEDLADAPSIYKQMSRGHLLSIPRPELGDDPFASVPELIQDYATE DVIQYFLRPREEGIDVFILNHKNEISHYVQHGTTVEALVSKVSQQHAFEGLYEMHGRFNLPQFFQLVRMQGELKAQPVGM VREDMGAEF
Sequences:
>Translated_809_residues MIAHSRWSTSALSLSDRLNKVRLARALALLSPLKRHLLHAIPLLLHFHGPRIPGYNGHATPCGLAGFEPQEPHLEAARVL SLGLPSLRADWPYAIEGIYAMGSTGSFGQNPFSDVDVWVIHEPNLSADDIQALADKLVLLHQWFAGFEFEVNFYLVHPFQ FRADKSYSGNGRVRLGVEHSGSAQHWLLLEEFYRTQICLGGKPLYWWPDARPSSDGLWLGDVQSLPASEYFSASLWQLYK GLVKPHKALLKVLLLEAYAWRYPNTEQLSTRVWLHTTKGDFSTANDPYFLLYEAIEEYLLAIEDHRRLEIVRRCFYLKCA VRLSHPQQPKDWRYLKMQLLVSAWEWPDALIQTLDDCEDWHTGQLQWFNAQLNELMLVSYQKLLRFAANHGVNEGLRVED LGMLTRKLHTCFNEDKHLVSKLNPLWSSRLQEPVLTVITSQSDGTHYLYRQEPQASALKGEAAVYVADNLASLLLWACIN QVCDDQTQWFSYGERRLGARLAATDKRLREAIKDTELKVSKQDLCQPWHYRKLVLVVNLEHDPTPDWPGQEVLVDIMNAN LFSLGRKQLNMLGSLDVLSFNSWGEWHAHHFEGEQALLKAMTFLAPGIRRAAGRLDLRTLGCSARLTFQLELAVHSLLKQ VAKLSCQASASSTLVQPLRIGNRNYGLFFNTLGVAYEDLADAPSIYKQMSRGHLLSIPRPELGDDPFASVPELIQDYATE DVIQYFLRPREEGIDVFILNHKNEISHYVQHGTTVEALVSKVSQQHAFEGLYEMHGRFNLPQFFQLVRMQGELKAQPVGM VREDMGAEF >Mature_809_residues MIAHSRWSTSALSLSDRLNKVRLARALALLSPLKRHLLHAIPLLLHFHGPRIPGYNGHATPCGLAGFEPQEPHLEAARVL SLGLPSLRADWPYAIEGIYAMGSTGSFGQNPFSDVDVWVIHEPNLSADDIQALADKLVLLHQWFAGFEFEVNFYLVHPFQ FRADKSYSGNGRVRLGVEHSGSAQHWLLLEEFYRTQICLGGKPLYWWPDARPSSDGLWLGDVQSLPASEYFSASLWQLYK GLVKPHKALLKVLLLEAYAWRYPNTEQLSTRVWLHTTKGDFSTANDPYFLLYEAIEEYLLAIEDHRRLEIVRRCFYLKCA VRLSHPQQPKDWRYLKMQLLVSAWEWPDALIQTLDDCEDWHTGQLQWFNAQLNELMLVSYQKLLRFAANHGVNEGLRVED LGMLTRKLHTCFNEDKHLVSKLNPLWSSRLQEPVLTVITSQSDGTHYLYRQEPQASALKGEAAVYVADNLASLLLWACIN QVCDDQTQWFSYGERRLGARLAATDKRLREAIKDTELKVSKQDLCQPWHYRKLVLVVNLEHDPTPDWPGQEVLVDIMNAN LFSLGRKQLNMLGSLDVLSFNSWGEWHAHHFEGEQALLKAMTFLAPGIRRAAGRLDLRTLGCSARLTFQLELAVHSLLKQ VAKLSCQASASSTLVQPLRIGNRNYGLFFNTLGVAYEDLADAPSIYKQMSRGHLLSIPRPELGDDPFASVPELIQDYATE DVIQYFLRPREEGIDVFILNHKNEISHYVQHGTTVEALVSKVSQQHAFEGLYEMHGRFNLPQFFQLVRMQGELKAQPVGM VREDMGAEF
Specific function: Unknown
COG id: COG3072
COG function: function code F; Adenylate cyclase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylyl cyclase class-1 family [H]
Homologues:
Organism=Escherichia coli, GI1790238, Length=829, Percent_Identity=33.0518697225573, Blast_Score=405, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000274 [H]
Pfam domain/function: PF01295 Adenylate_cycl [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 92269; Mature: 92269
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAHSRWSTSALSLSDRLNKVRLARALALLSPLKRHLLHAIPLLLHFHGPRIPGYNGHAT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PCGLAGFEPQEPHLEAARVLSLGLPSLRADWPYAIEGIYAMGSTGSFGQNPFSDVDVWVI CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHEEEEECCCCCCCCCCCCCCEEEEE HEPNLSADDIQALADKLVLLHQWFAGFEFEVNFYLVHPFQFRADKSYSGNGRVRLGVEHS ECCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCEEECCCCCCCCCCEEEEEECCC GSAQHWLLLEEFYRTQICLGGKPLYWWPDARPSSDGLWLGDVQSLPASEYFSASLWQLYK CCCHHHHHHHHHHHHHEEECCCCEEECCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHH GLVKPHKALLKVLLLEAYAWRYPNTEQLSTRVWLHTTKGDFSTANDPYFLLYEAIEEYLL HHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHH AIEDHRRLEIVRRCFYLKCAVRLSHPQQPKDWRYLKMQLLVSAWEWPDALIQTLDDCEDW HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC HTGQLQWFNAQLNELMLVSYQKLLRFAANHGVNEGLRVEDLGMLTRKLHTCFNEDKHLVS CCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH KLNPLWSSRLQEPVLTVITSQSDGTHYLYRQEPQASALKGEAAVYVADNLASLLLWACIN HHCHHHHHHHCCCEEEEEECCCCCCEEEEECCCCHHHCCCCEEEEEHHHHHHHHHHHHHH QVCDDQTQWFSYGERRLGARLAATDKRLREAIKDTELKVSKQDLCQPWHYRKLVLVVNLE HHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEECHHHHCCCCCCEEEEEEEEEC HDPTPDWPGQEVLVDIMNANLFSLGRKQLNMLGSLDVLSFNSWGEWHAHHFEGEQALLKA CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHCCCHHHHHHH MTFLAPGIRRAAGRLDLRTLGCSARLTFQLELAVHSLLKQVAKLSCQASASSTLVQPLRI HHHHCCHHHHHHCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC GNRNYGLFFNTLGVAYEDLADAPSIYKQMSRGHLLSIPRPELGDDPFASVPELIQDYATE CCCCCCEEEHHHHHHHHHHCCCHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHH DVIQYFLRPREEGIDVFILNHKNEISHYVQHGTTVEALVSKVSQQHAFEGLYEMHGRFNL HHHHHHHCCCCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC PQFFQLVRMQGELKAQPVGMVREDMGAEF HHHHHHHHHCCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure MIAHSRWSTSALSLSDRLNKVRLARALALLSPLKRHLLHAIPLLLHFHGPRIPGYNGHAT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC PCGLAGFEPQEPHLEAARVLSLGLPSLRADWPYAIEGIYAMGSTGSFGQNPFSDVDVWVI CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHEEEEECCCCCCCCCCCCCCEEEEE HEPNLSADDIQALADKLVLLHQWFAGFEFEVNFYLVHPFQFRADKSYSGNGRVRLGVEHS ECCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCEEECCCCCCCCCCEEEEEECCC GSAQHWLLLEEFYRTQICLGGKPLYWWPDARPSSDGLWLGDVQSLPASEYFSASLWQLYK CCCHHHHHHHHHHHHHEEECCCCEEECCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHH GLVKPHKALLKVLLLEAYAWRYPNTEQLSTRVWLHTTKGDFSTANDPYFLLYEAIEEYLL HHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHH AIEDHRRLEIVRRCFYLKCAVRLSHPQQPKDWRYLKMQLLVSAWEWPDALIQTLDDCEDW HHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC HTGQLQWFNAQLNELMLVSYQKLLRFAANHGVNEGLRVEDLGMLTRKLHTCFNEDKHLVS CCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH KLNPLWSSRLQEPVLTVITSQSDGTHYLYRQEPQASALKGEAAVYVADNLASLLLWACIN HHCHHHHHHHCCCEEEEEECCCCCCEEEEECCCCHHHCCCCEEEEEHHHHHHHHHHHHHH QVCDDQTQWFSYGERRLGARLAATDKRLREAIKDTELKVSKQDLCQPWHYRKLVLVVNLE HHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEECHHHHCCCCCCEEEEEEEEEC HDPTPDWPGQEVLVDIMNANLFSLGRKQLNMLGSLDVLSFNSWGEWHAHHFEGEQALLKA CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHCCCHHHHHHH MTFLAPGIRRAAGRLDLRTLGCSARLTFQLELAVHSLLKQVAKLSCQASASSTLVQPLRI HHHHCCHHHHHHCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC GNRNYGLFFNTLGVAYEDLADAPSIYKQMSRGHLLSIPRPELGDDPFASVPELIQDYATE CCCCCCEEEHHHHHHHHHHCCCHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHH DVIQYFLRPREEGIDVFILNHKNEISHYVQHGTTVEALVSKVSQQHAFEGLYEMHGRFNL HHHHHHHCCCCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC PQFFQLVRMQGELKAQPVGMVREDMGAEF HHHHHHHHHCCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]