Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776383

Identifier: 119776383

GI number: 119776383

Start: 3845603

End: 3845842

Strand: Reverse

Name: 119776383

Synonym: Sama_3251

Alternate gene names: NA

Gene position: 3845842-3845603 (Counterclockwise)

Preceding gene: 119776385

Following gene: 119776382

Centisome position: 89.31

GC content: 51.25

Gene sequence:

>240_bases
GTGTTGATCCTTTTCAATCTTGGGCTTGAGTGCGATTATAAAGCCAAACCCGCGCCTTATGCATTGAAGTTGAGAAAAAT
GAGACTGTATTTATCCCTATTGCTTGTTAGCCTGCTGCTATTGGGCTGTGGCCAGAAAGGTCCGCTCTACAAGACACCGC
CTGCTCCCGATAATCAGGCCCAGCAACCGGCAGCGCCAGTGGCAGCCGATACTCCCAGCACCGATGCGCGCAAACAATAA

Upstream 100 bases:

>100_bases
TCAGCATCTTCATTGTCGATGGCGTTTTCGATGGCGCTTTCAATGATATTGAACATCTCGTCGGCCAAATGGTGAAACTC
TGTGTCTGTCATCGCCATGT

Downstream 100 bases:

>100_bases
GGACCTCTATCTTGGATCATTTTCTCTATCGTGAAGAGCGGCTGTTTGCCGAAGAGTGCGATGTGGCAGGTCTCGCAGCC
GAACATGGCACGCCCCTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MLILFNLGLECDYKAKPAPYALKLRKMRLYLSLLLVSLLLLGCGQKGPLYKTPPAPDNQAQQPAAPVAADTPSTDARKQ

Sequences:

>Translated_79_residues
MLILFNLGLECDYKAKPAPYALKLRKMRLYLSLLLVSLLLLGCGQKGPLYKTPPAPDNQAQQPAAPVAADTPSTDARKQ
>Mature_79_residues
MLILFNLGLECDYKAKPAPYALKLRKMRLYLSLLLVSLLLLGCGQKGPLYKTPPAPDNQAQQPAAPVAADTPSTDARKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8610; Mature: 8610

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILFNLGLECDYKAKPAPYALKLRKMRLYLSLLLVSLLLLGCGQKGPLYKTPPAPDNQA
CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
QQPAAPVAADTPSTDARKQ
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLILFNLGLECDYKAKPAPYALKLRKMRLYLSLLLVSLLLLGCGQKGPLYKTPPAPDNQA
CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
QQPAAPVAADTPSTDARKQ
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA