Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is tatA

Identifier: 119776337

GI number: 119776337

Start: 3796274

End: 3796507

Strand: Direct

Name: tatA

Synonym: Sama_3205

Alternate gene names: 119776337

Gene position: 3796274-3796507 (Clockwise)

Preceding gene: 119776336

Following gene: 119776338

Centisome position: 88.16

GC content: 47.44

Gene sequence:

>234_bases
ATGGGTGGTATCAGTATTTGGCAATTGCTCATCATCGCACTTATCGTGGTTTTGCTGTTTGGCACCAAGAAGTTGCGTTC
TCTGGGTGGCGACCTCGGTGGCGCTATCAAGGGATTCAAAAACGCCATGTCTGATGAAGAAAAAAAGGCATTGGAAGACA
AAGAAGCCGCTGCTCAAACCACACAACAGGCAACTGAAAAGAAGCCTGAGGCCGACAAAAAAGAACAGGCGTAA

Upstream 100 bases:

>100_bases
CCGGATGGCGATCCAGACCAAAGAATCGCAAATTTTAGCTAGCACTAAATAATCACAGGTTCATAATAGAATCACTTAAT
TTTGTAGAGAGGAATTCTTC

Downstream 100 bases:

>100_bases
TTCCTTATGTTTGACGGTATCGGCTTTATGGAGCTTCTGCTCATCGCCATCATAGGTTTGGTGGTGCTTGGGCCGGAGAG
ATTACCTGTTGCAGTGCGTA

Product: Sec-independent protein translocase protein TatA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MGGISIWQLLIIALIVVLLFGTKKLRSLGGDLGGAIKGFKNAMSDEEKKALEDKEAAAQTTQQATEKKPEADKKEQA

Sequences:

>Translated_77_residues
MGGISIWQLLIIALIVVLLFGTKKLRSLGGDLGGAIKGFKNAMSDEEKKALEDKEAAAQTTQQATEKKPEADKKEQA
>Mature_76_residues
GGISIWQLLIIALIVVLLFGTKKLRSLGGDLGGAIKGFKNAMSDEEKKALEDKEAAAQTTQQATEKKPEADKKEQA

Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei

COG id: COG1826

COG function: function code U; Sec-independent protein secretion pathway components

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatA/E family

Homologues:

Organism=Escherichia coli, GI87082337, Length=88, Percent_Identity=54.5454545454545, Blast_Score=86, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TATA_SHEAM (A1SAK1)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_929077.1
- STRING:   A1SAK1
- GeneID:   4605452
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_3205
- NMPDR:   fig|326297.7.peg.3017
- eggNOG:   NOG84601
- HOGENOM:   HBG751935
- OMA:   TINHNAD
- HAMAP:   MF_00236
- InterPro:   IPR003369
- InterPro:   IPR006312
- TIGRFAMs:   TIGR01411

Pfam domain/function: PF02416 MttA_Hcf106

EC number: NA

Molecular weight: Translated: 8272; Mature: 8141

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x16992190)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGISIWQLLIIALIVVLLFGTKKLRSLGGDLGGAIKGFKNAMSDEEKKALEDKEAAAQT
CCHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
TQQATEKKPEADKKEQA
HHHHHHCCCCCCCCCCH
>Mature Secondary Structure 
GGISIWQLLIIALIVVLLFGTKKLRSLGGDLGGAIKGFKNAMSDEEKKALEDKEAAAQT
CHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
TQQATEKKPEADKKEQA
HHHHHHCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA