Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776299

Identifier: 119776299

GI number: 119776299

Start: 3755074

End: 3755628

Strand: Reverse

Name: 119776299

Synonym: Sama_3167

Alternate gene names: NA

Gene position: 3755628-3755074 (Counterclockwise)

Preceding gene: 119776300

Following gene: 119776298

Centisome position: 87.22

GC content: 50.09

Gene sequence:

>555_bases
ATGCTGAAAAAATTCCTTATCGTGATTTTATTGCTGTTAGCCGCCCCCTTTATGGTGGCCCTGTTTATTAAGTCGGATTA
TGAGGTCAGTGTCAGTCGCACCATCGACCGTCCGCTTGATGAAGTCTTTGGCTACCTCAGATTGCTGAAGCATCAGGATG
AATTCAGTGTCTGGGCCAAGATGGATCCCAACATGCAGCAGCATTTTACCGGCATAGATGGAGAGCCCGGTTTTGTCAGT
GCCTGGGAGAGCAGCAATCCCGATGTGGGTAAAGGCGAGCAGGAAATTATCGCCATAGTGCCCGGTAAGCGAATTGATTA
CGCGCTTCGTTTTATCGAACCCTTTACGTCCAACGACAGCGCTTATCTCATCACTGAGCCCATTGAAGACGGCAGCACCC
TGGTGACCTGGGGTTTTGTGGGCCATATGTCGTATCCCATGAACCTGCTTATTCCCCTGATGGATGTTGAGTCCTTAATC
CTGAAAGACCTGGATACCGGTCTTGCCAATTTGAAACAAATACTGGAGCGGCAGGCGACGCCCCAGCCTGAATGA

Upstream 100 bases:

>100_bases
AGCGCTGCGCAGAGAGACTTGCCAAAGCAGATAAATTGGACATAAAACAGGTGAAGTAGCGGATTTGGCTGTACCGCAAT
CACTGGAGCAGGAGCCCGCT

Downstream 100 bases:

>100_bases
TTCTGGCTTTCCAATTGTTAACTATTCGTTGTAATCTGGTCGCTGCGCTCGCCCCGGCTCGGGGTGTGAGAAGAACAAGA
TAAATAAGAAGAAAAGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: Polyketide Cyclase; GCN5-Related N-Acetyltransferase; DoxX Family Domain-Containing Protein; Signal Peptide; DoxX Family Protein; Polyketide Cyclase / Dehydrase And Lipid Transport

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MLKKFLIVILLLLAAPFMVALFIKSDYEVSVSRTIDRPLDEVFGYLRLLKHQDEFSVWAKMDPNMQQHFTGIDGEPGFVS
AWESSNPDVGKGEQEIIAIVPGKRIDYALRFIEPFTSNDSAYLITEPIEDGSTLVTWGFVGHMSYPMNLLIPLMDVESLI
LKDLDTGLANLKQILERQATPQPE

Sequences:

>Translated_184_residues
MLKKFLIVILLLLAAPFMVALFIKSDYEVSVSRTIDRPLDEVFGYLRLLKHQDEFSVWAKMDPNMQQHFTGIDGEPGFVS
AWESSNPDVGKGEQEIIAIVPGKRIDYALRFIEPFTSNDSAYLITEPIEDGSTLVTWGFVGHMSYPMNLLIPLMDVESLI
LKDLDTGLANLKQILERQATPQPE
>Mature_184_residues
MLKKFLIVILLLLAAPFMVALFIKSDYEVSVSRTIDRPLDEVFGYLRLLKHQDEFSVWAKMDPNMQQHFTGIDGEPGFVS
AWESSNPDVGKGEQEIIAIVPGKRIDYALRFIEPFTSNDSAYLITEPIEDGSTLVTWGFVGHMSYPMNLLIPLMDVESLI
LKDLDTGLANLKQILERQATPQPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20774; Mature: 20774

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKFLIVILLLLAAPFMVALFIKSDYEVSVSRTIDRPLDEVFGYLRLLKHQDEFSVWAK
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCHHHHHHHHHHHHCCCCCEEEEE
MDPNMQQHFTGIDGEPGFVSAWESSNPDVGKGEQEIIAIVPGKRIDYALRFIEPFTSNDS
CCCCHHHHCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCC
AYLITEPIEDGSTLVTWGFVGHMSYPMNLLIPLMDVESLILKDLDTGLANLKQILERQAT
EEEEECCCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQPE
CCCC
>Mature Secondary Structure
MLKKFLIVILLLLAAPFMVALFIKSDYEVSVSRTIDRPLDEVFGYLRLLKHQDEFSVWAK
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCHHHHHHHHHHHHCCCCCEEEEE
MDPNMQQHFTGIDGEPGFVSAWESSNPDVGKGEQEIIAIVPGKRIDYALRFIEPFTSNDS
CCCCHHHHCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCC
AYLITEPIEDGSTLVTWGFVGHMSYPMNLLIPLMDVESLILKDLDTGLANLKQILERQAT
EEEEECCCCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQPE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA