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The map label for this gene is yaaJ [C]

Identifier: 119776298

GI number: 119776298

Start: 3753582

End: 3754961

Strand: Reverse

Name: yaaJ [C]

Synonym: Sama_3166

Alternate gene names: 119776298

Gene position: 3754961-3753582 (Counterclockwise)

Preceding gene: 119776299

Following gene: 119776295

Centisome position: 87.2

GC content: 56.3

Gene sequence:

>1380_bases
ATGGAAGCTGTAACTGAATTAGTAAAGTCGCTGAATAGTCTGGTGTGGGGTATTCCCATGCTGGTCATGATCCTCGGCGT
CGGCCTGTACCTGTCCCTTGGACTCAAGCTGTTACCCATCCTTAAGCTTGGCAAGGGCTTCAGATTGCTGTGGTCGGGCA
GAACGCCCGGTCAGGGCAAAGAGGTGAAAGGCGATGTCAGTCCTTTCAACGCCTTGATGACCTCGCTCTCGGCCACCATA
GGTACGGGTAACATCGCCGGTGTGGCCACCGCCATTTTTGTGGGTGGCCCAGGCGCACTGTTCTGGATGTGGTGTACCGC
TCTGGTGGGTATGGCCACCAAATATTCTGAGGCCGTGCTGGCGGTGCGATATCGCGAAGTAGATGAAAAGGGTAACTATA
TCGGTGGCCCCATGTACTACATCAAGAATGGTCTTGGCAGTAAATGGACCTGGCTTGGCACTGCGTTTGCGCTGTTTGGC
TCCTTTGCCGGTTTCGGAATTGGCAACACAGTGCAGGCCAACTCTGTGGCTTCGGCGCTGACCAGTAACTTCGGTGTGCC
TGCCTGGGTGTCGGGTGTGGTGATGATGGTGCTGGTGGGGCTGGTGCTGATGGGCGGTATCAAGCGTATTGCCATCGTGG
CCGGTAAGCTGGTTCCCCTGATGACCATATTTTATATTACCGCCGGTATTGCCGTGTTGGTGGTGTATGCCAGTGAAATC
CCTGCCGCTTTGAGCCTGATTATCTCCAGCGCTTTCAGTCCTGTAGCAGCTCAGGGTGGCTTTGCCGGCGCTGCCGTGAT
GGTGGCTATCCAGATGGGGGTTGCCCGCGGCGTATTCTCCAACGAGGCGGGTCTTGGCAGTGCGCCCATTGCCCACGCGG
CTGCGCAAACCAAGAGTCCTGTGACTCAGGGACTGGTGGGCATGCTGGGGACCTTTATCGATACCATCATAGTGTGCAGC
ATTACGGGTCTTGCCATCGTGGTGTCCGGCGCCTGGACCTCAGGCGAAAATGGCGCGGCGCTCACCTCTTACGCCTTCTC
CCACGCCTTGCCTATTGGTGACTATATTGTTGCCGTTGCGCTGGCGATTTTCGCCTTTACCACCATCCTTGGCTGGAGTG
TGTACAGCGAAAAATGCGTCCAGTATCTTTTGGGGGTGAAGGCGGTGATGCCGTTTCGTCTGATTTGGACTCTGGTGGTG
CCATTGGGGGCCATGGGGTCGTTGGACTTTGTCTGGCTTCTGGCCGATACCCTCAATGCCATGATGGCCATCCCCAACCT
GATTGCCCTGGCTCTGCTTAGCCCTGTGGTATTCAAGTTGACCCGCGAGTTTTTCTCCAGCCGCGATGAGGCCAGTACCA
AGTCTGTAGAAGCGGAGTAA

Upstream 100 bases:

>100_bases
AATTGTTAACTATTCGTTGTAATCTGGTCGCTGCGCTCGCCCCGGCTCGGGGTGTGAGAAGAACAAGATAAATAAGAAGA
AAAGCATCGACGAGGTTTGA

Downstream 100 bases:

>100_bases
CTGAGTGAGCTTACGGTGAGCCTGTTGCTGTTGTGTCTGGAGGGCCGCTCGTCTACCTTGGCCAACACCAGCCGATGGAT
GCACCAGAGTCTGGGCGAGG

Product: amino acid carrier protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MEAVTELVKSLNSLVWGIPMLVMILGVGLYLSLGLKLLPILKLGKGFRLLWSGRTPGQGKEVKGDVSPFNALMTSLSATI
GTGNIAGVATAIFVGGPGALFWMWCTALVGMATKYSEAVLAVRYREVDEKGNYIGGPMYYIKNGLGSKWTWLGTAFALFG
SFAGFGIGNTVQANSVASALTSNFGVPAWVSGVVMMVLVGLVLMGGIKRIAIVAGKLVPLMTIFYITAGIAVLVVYASEI
PAALSLIISSAFSPVAAQGGFAGAAVMVAIQMGVARGVFSNEAGLGSAPIAHAAAQTKSPVTQGLVGMLGTFIDTIIVCS
ITGLAIVVSGAWTSGENGAALTSYAFSHALPIGDYIVAVALAIFAFTTILGWSVYSEKCVQYLLGVKAVMPFRLIWTLVV
PLGAMGSLDFVWLLADTLNAMMAIPNLIALALLSPVVFKLTREFFSSRDEASTKSVEAE

Sequences:

>Translated_459_residues
MEAVTELVKSLNSLVWGIPMLVMILGVGLYLSLGLKLLPILKLGKGFRLLWSGRTPGQGKEVKGDVSPFNALMTSLSATI
GTGNIAGVATAIFVGGPGALFWMWCTALVGMATKYSEAVLAVRYREVDEKGNYIGGPMYYIKNGLGSKWTWLGTAFALFG
SFAGFGIGNTVQANSVASALTSNFGVPAWVSGVVMMVLVGLVLMGGIKRIAIVAGKLVPLMTIFYITAGIAVLVVYASEI
PAALSLIISSAFSPVAAQGGFAGAAVMVAIQMGVARGVFSNEAGLGSAPIAHAAAQTKSPVTQGLVGMLGTFIDTIIVCS
ITGLAIVVSGAWTSGENGAALTSYAFSHALPIGDYIVAVALAIFAFTTILGWSVYSEKCVQYLLGVKAVMPFRLIWTLVV
PLGAMGSLDFVWLLADTLNAMMAIPNLIALALLSPVVFKLTREFFSSRDEASTKSVEAE
>Mature_459_residues
MEAVTELVKSLNSLVWGIPMLVMILGVGLYLSLGLKLLPILKLGKGFRLLWSGRTPGQGKEVKGDVSPFNALMTSLSATI
GTGNIAGVATAIFVGGPGALFWMWCTALVGMATKYSEAVLAVRYREVDEKGNYIGGPMYYIKNGLGSKWTWLGTAFALFG
SFAGFGIGNTVQANSVASALTSNFGVPAWVSGVVMMVLVGLVLMGGIKRIAIVAGKLVPLMTIFYITAGIAVLVVYASEI
PAALSLIISSAFSPVAAQGGFAGAAVMVAIQMGVARGVFSNEAGLGSAPIAHAAAQTKSPVTQGLVGMLGTFIDTIIVCS
ITGLAIVVSGAWTSGENGAALTSYAFSHALPIGDYIVAVALAIFAFTTILGWSVYSEKCVQYLLGVKAVMPFRLIWTLVV
PLGAMGSLDFVWLLADTLNAMMAIPNLIALALLSPVVFKLTREFFSSRDEASTKSVEAE

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=454, Percent_Identity=35.0220264317181, Blast_Score=230, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 47836; Mature: 47836

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]