| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119776280
Identifier: 119776280
GI number: 119776280
Start: 3736366
End: 3737229
Strand: Reverse
Name: 119776280
Synonym: Sama_3148
Alternate gene names: NA
Gene position: 3737229-3736366 (Counterclockwise)
Preceding gene: 119776282
Following gene: 119776278
Centisome position: 86.79
GC content: 54.75
Gene sequence:
>864_bases ATGGAACATCAAGTGGCACTGGATGGGATGCCGTCGCTGTTGTCTTTGTATCGCAAGATTTTATTCGGCCGTAAGCCCGG TTGGGATCAGCAGCCGCTGCCCGTGATCCGCGTGTCTGTGCCCCAGGTGTCTCTGTCGCCAGCGGTCGTGTCCGACTATG CCAAAGTGTGTGGGTTCAACTTCGATGGCAAGACGCTGCCCCCCACCTTTTTGTACATTCTGGCGTTTCGCCTGCATGCG GTGATCTTCACCCACGACGCTATTACCTTTCCGCTGCTGGGCATGATCCACCTGAAAAACCGTATCACTCAGTACCGCCC CGTCACTGTGTCTGAGCAGGTACGCTTGGAATGCGTACTGGCATCCAGCGAGCAAACCGATGCCGGATTGGAGTTTGAGT TGGTTTCCAAGGTTTGGGTGGGCGATGAACTGGTGTGGGAAGCCCACTCTATCTATCTGTATCGTATTGAAAGCGCAGGT CGTCGCGCCCGTCCCCCGAAGGGCAGCGACATGGCGTGGGACAACCCCAAAACCTGGTCTCTGGACGATAAACTGGGCTG GCGCTACGCCAGAGCCTCTGGTGACTTCAATCTCATCCATTTACACCCTTTCCTCTCTAAACGCTTTGGGTTTGAGAGGG TACTGGCACATGGTATGTGGTCCAAGGCGCGCTGTGTTGCCGAGCTAATGGACAAGATAGGTAACAGACCCTGCACCCTG GATGTGGCTTTTAAATTGCCGCTGTTTATGCCCGGTGAGGTGACCTTTGCCAGTGAAGCCAAAGAGGATGGACTCAGGTT TGAACTTCGAGATCAAAAAGGTCGCAGACCCCATCTCAGCGGTGAAGTGACCTTTCACGACTGA
Upstream 100 bases:
>100_bases TGTTGAAAATTAAATGTATAGGGTCGTGATTTTATTGAGGGTACACATTGCAGTGAATGAGAGTATAATTCCCGCTCTTT GCTAGGGGGGAGCCTACACC
Downstream 100 bases:
>100_bases GGGTAAATGATGCATCCGCTGACAAAGATTGATCAGCCTACAGCATCTTCCCCAATAAAAACGGCCGCAATATGCGGCCG TTTTTTATTGTCTTTTCAAG
Product: MaoC domain-containing protein
Products: NA
Alternate protein names: MaoC Domain Protein Dehydratase; Acyl Dehydratase; MaoC-Like Dehydratase; MaoC Domain-Containing Protein Dehydratase; MaoC Domain-Containing Protein; MaoC Like Domain-Containing Protein; MaoC-Like Domain-Containing Protein; MaoC-Like Protein; MaoC-Like Domain Protein; Enoyl-CoA Hydratase; Maoc Domain Protein Dehydratase; Dehydrogenase; Maoc Domain Protein; Conserved Hypothethical Protein MaoC Domain Protein
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MEHQVALDGMPSLLSLYRKILFGRKPGWDQQPLPVIRVSVPQVSLSPAVVSDYAKVCGFNFDGKTLPPTFLYILAFRLHA VIFTHDAITFPLLGMIHLKNRITQYRPVTVSEQVRLECVLASSEQTDAGLEFELVSKVWVGDELVWEAHSIYLYRIESAG RRARPPKGSDMAWDNPKTWSLDDKLGWRYARASGDFNLIHLHPFLSKRFGFERVLAHGMWSKARCVAELMDKIGNRPCTL DVAFKLPLFMPGEVTFASEAKEDGLRFELRDQKGRRPHLSGEVTFHD
Sequences:
>Translated_287_residues MEHQVALDGMPSLLSLYRKILFGRKPGWDQQPLPVIRVSVPQVSLSPAVVSDYAKVCGFNFDGKTLPPTFLYILAFRLHA VIFTHDAITFPLLGMIHLKNRITQYRPVTVSEQVRLECVLASSEQTDAGLEFELVSKVWVGDELVWEAHSIYLYRIESAG RRARPPKGSDMAWDNPKTWSLDDKLGWRYARASGDFNLIHLHPFLSKRFGFERVLAHGMWSKARCVAELMDKIGNRPCTL DVAFKLPLFMPGEVTFASEAKEDGLRFELRDQKGRRPHLSGEVTFHD >Mature_287_residues MEHQVALDGMPSLLSLYRKILFGRKPGWDQQPLPVIRVSVPQVSLSPAVVSDYAKVCGFNFDGKTLPPTFLYILAFRLHA VIFTHDAITFPLLGMIHLKNRITQYRPVTVSEQVRLECVLASSEQTDAGLEFELVSKVWVGDELVWEAHSIYLYRIESAG RRARPPKGSDMAWDNPKTWSLDDKLGWRYARASGDFNLIHLHPFLSKRFGFERVLAHGMWSKARCVAELMDKIGNRPCTL DVAFKLPLFMPGEVTFASEAKEDGLRFELRDQKGRRPHLSGEVTFHD
Specific function: Unknown
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32669; Mature: 32669
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHQVALDGMPSLLSLYRKILFGRKPGWDQQPLPVIRVSVPQVSLSPAVVSDYAKVCGFN CCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEECCHHHHHHHHHHHCCC FDGKTLPPTFLYILAFRLHAVIFTHDAITFPLLGMIHLKNRITQYRPVTVSEQVRLECVL CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE ASSEQTDAGLEFELVSKVWVGDELVWEAHSIYLYRIESAGRRARPPKGSDMAWDNPKTWS ECCCCCCCCCCCEEHHHHHCCCHHEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC LDDKLGWRYARASGDFNLIHLHPFLSKRFGFERVLAHGMWSKARCVAELMDKIGNRPCTL CCCCCCEEEEECCCCEEEEEECHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEE DVAFKLPLFMPGEVTFASEAKEDGLRFELRDQKGRRPHLSGEVTFHD EEEEECCEECCCCEEECCCCCCCCCEEEECCCCCCCCCCCCEEEECC >Mature Secondary Structure MEHQVALDGMPSLLSLYRKILFGRKPGWDQQPLPVIRVSVPQVSLSPAVVSDYAKVCGFN CCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEECCHHHHHHHHHHHCCC FDGKTLPPTFLYILAFRLHAVIFTHDAITFPLLGMIHLKNRITQYRPVTVSEQVRLECVL CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE ASSEQTDAGLEFELVSKVWVGDELVWEAHSIYLYRIESAGRRARPPKGSDMAWDNPKTWS ECCCCCCCCCCCEEHHHHHCCCHHEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCC LDDKLGWRYARASGDFNLIHLHPFLSKRFGFERVLAHGMWSKARCVAELMDKIGNRPCTL CCCCCCEEEEECCCCEEEEEECHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEE DVAFKLPLFMPGEVTFASEAKEDGLRFELRDQKGRRPHLSGEVTFHD EEEEECCEECCCCEEECCCCCCCCCEEEECCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA