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The map label for this gene is cheD [H]

Identifier: 119776282

GI number: 119776282

Start: 3738233

End: 3738865

Strand: Reverse

Name: cheD [H]

Synonym: Sama_3150

Alternate gene names: 119776282

Gene position: 3738865-3738233 (Counterclockwise)

Preceding gene: 119776283

Following gene: 119776280

Centisome position: 86.83

GC content: 54.19

Gene sequence:

>633_bases
ATGGCCTTGCCCACCCAACTGGTATATCCAGGATTTGAAAAGATCCCACGCTTCTGGGACAACGAACAACAGTCGCAAGT
CGCCCGGGTTGACCCCGGTGAGTATTACTATTCCTGTCAGGATGAGTTTATCTATACCCGTTTGGGATCCTGTGTCGCTG
CCTGTATCTGGGACCCACTGATGGGCATTGGTGGCTTAAACCACTTCCTGTTACCCGAAAAAGTGCTTCACGAAGATTGG
CACCAGCTCACCAGCTACTCCTGTCGTTACGGCAACTGGGCCATGGAGCAATTGATTAACGGCATCCTCAGCGCGGGCGG
GCTTAAATCCCGCCTCAAGGCAAAAATATTCGGCGGTGCCACACTGGGCCGTATTTCTGTACTCAATGTGGGTCAGTCCA
ATATCGCCTTTGTGAGGGAGTATCTGGCATTGGAAGGGATACCCGTGATGTCAGAAGATCTCGGTGGCCCCTGGCCGCGC
AAGGTGCTTTTTCATCCCCAAAGCGGCAGGGTCAGACTGAAGCGGCTCGAAATGACCGGCATGGCACAAATCGAGCGCGA
AGAGGAGGCCTATCTCAACGATGTGGCTGAGCATGCCAAGGTGCCCGAGCCCGGCTCGATAGAACTTTTCTGA

Upstream 100 bases:

>100_bases
AGTAGCTGACTTATTGTCATTGCCGGGTCGTCCGAGTGACTGAATTACCGGGGTAATCGCCATCGTTGGCTATACTCAGG
AAGACAGCCGCGGAGGACCC

Downstream 100 bases:

>100_bases
TTACTCAGGCGTCTGACTACAGGGGCTTTTGGGCCACAAAGTGCACGTAGCGCCCCAGTCGTAAAAAGGCAGGTTCGCGG
GAGTATTTCAGCTCCATCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MALPTQLVYPGFEKIPRFWDNEQQSQVARVDPGEYYYSCQDEFIYTRLGSCVAACIWDPLMGIGGLNHFLLPEKVLHEDW
HQLTSYSCRYGNWAMEQLINGILSAGGLKSRLKAKIFGGATLGRISVLNVGQSNIAFVREYLALEGIPVMSEDLGGPWPR
KVLFHPQSGRVRLKRLEMTGMAQIEREEEAYLNDVAEHAKVPEPGSIELF

Sequences:

>Translated_210_residues
MALPTQLVYPGFEKIPRFWDNEQQSQVARVDPGEYYYSCQDEFIYTRLGSCVAACIWDPLMGIGGLNHFLLPEKVLHEDW
HQLTSYSCRYGNWAMEQLINGILSAGGLKSRLKAKIFGGATLGRISVLNVGQSNIAFVREYLALEGIPVMSEDLGGPWPR
KVLFHPQSGRVRLKRLEMTGMAQIEREEEAYLNDVAEHAKVPEPGSIELF
>Mature_209_residues
ALPTQLVYPGFEKIPRFWDNEQQSQVARVDPGEYYYSCQDEFIYTRLGSCVAACIWDPLMGIGGLNHFLLPEKVLHEDWH
QLTSYSCRYGNWAMEQLINGILSAGGLKSRLKAKIFGGATLGRISVLNVGQSNIAFVREYLALEGIPVMSEDLGGPWPRK
VLFHPQSGRVRLKRLEMTGMAQIEREEEAYLNDVAEHAKVPEPGSIELF

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 23691; Mature: 23560

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPTQLVYPGFEKIPRFWDNEQQSQVARVDPGEYYYSCQDEFIYTRLGSCVAACIWDPL
CCCCCCCCCCCHHHHHHHCCCHHHHHEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH
MGIGGLNHFLLPEKVLHEDWHQLTSYSCRYGNWAMEQLINGILSAGGLKSRLKAKIFGGA
HHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCC
TLGRISVLNVGQSNIAFVREYLALEGIPVMSEDLGGPWPRKVLFHPQSGRVRLKRLEMTG
CCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEEECCCCCCEEEEEECHHH
MAQIEREEEAYLNDVAEHAKVPEPGSIELF
HHHHHHHHHHHHHHHHHHCCCCCCCCEECC
>Mature Secondary Structure 
ALPTQLVYPGFEKIPRFWDNEQQSQVARVDPGEYYYSCQDEFIYTRLGSCVAACIWDPL
CCCCCCCCCCHHHHHHHCCCHHHHHEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH
MGIGGLNHFLLPEKVLHEDWHQLTSYSCRYGNWAMEQLINGILSAGGLKSRLKAKIFGGA
HHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCC
TLGRISVLNVGQSNIAFVREYLALEGIPVMSEDLGGPWPRKVLFHPQSGRVRLKRLEMTG
CCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEEECCCCCCEEEEEECHHH
MAQIEREEEAYLNDVAEHAKVPEPGSIELF
HHHHHHHHHHHHHHHHHHCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA