Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776274

Identifier: 119776274

GI number: 119776274

Start: 3729464

End: 3730657

Strand: Reverse

Name: 119776274

Synonym: Sama_3142

Alternate gene names: NA

Gene position: 3730657-3729464 (Counterclockwise)

Preceding gene: 119776275

Following gene: 119776273

Centisome position: 86.64

GC content: 54.52

Gene sequence:

>1194_bases
ATGAACACCTTTCGTTTGTCTGTATTGGCATCTGCCTTGATTTCTGCTGCGGCAGCCGCTGAAACCCCTACTCTGGGTAA
CCCCGCCATCAGTGCCGTATTGGATGGCTACTACCAGAGTGGCGATCGTGCCCTTGGTGGCCGTGAAGAAGGCTTTGGCC
TGGGTGAGAGTGAGCTGGCCATCAGTGCCAATATCGATGACCTCTTCTATGGCAAGTTAACCGCAGTGATTGAGGCGCAC
GATGGTGAAACCGAGCTGGAGCTTGAAGAAGCCTTTGTCCAGACTCTGGCATTGCCTGGGGGCCTGTCTGTGCGCGCGGG
CCGTTTCCTGTCTGATGTGGGTTACCTGAACAACCAGCACCTCCACAGCGATGCCTTTGCCGGTCGCCCTGCGGTGTACC
GCGCTTTTCTTGGCAGTCATTACTTTGATGATGGTCTGCGTCTGAGCTGGGTTGCACCGACGGATCTCTATTGGACCTTC
GGCGTTGAAGGCTTCAAAGGCGACAAGATGCGTGCCGAAGACGAGCATGGCGAGCGTGAATTCGATACCGTTGGGGTTTA
CAACGCCTTCACCAAGTTGGGCGGTGATATAGGTGACAACAGTTCATGGCAGCTGGGACTGGCCTACATGAAAAACCAGA
ATGGCCGCCTCACCCCCCATGAAGAAGGGGAAGAGGTTCATGAGGAAGATGAACACGCCCATGACCACAGCCATAGTGCC
GCCTACACGGGCGAGAACACCTATGTGGCTGACTTTGTTTATAAATGGGCGCCAAACGGCAATTACAAGTATCAACACCT
CACCCTGAGCGGCGAGTTTTTCCGCGTGAACGATTTCAAGGCGCCAGAGCTGCATGAAGAGGAACACGAGGAAGAAGAAG
GCCACGAGCATGCCCATGACAAGGACTACCATCAGGGCTGGTACCTGAGTGGTGTGTATCAGTTCAGCCCCAGCTGGTCT
GCCGGTTTGCGTTATGGCGAGCTGGATACCCAACTGGCCCACGATGACCACTATGATGCCCAGAAGCTGAAAGAGACCGA
AGTCAGCCTCAACTGGCATCATAGCCATTTCTCCACCGTGCGTTTGCAGTACACCCGTCAACAGGGAACCAACTTTGACG
GCATCAGCGACGATAATCTGTTCACCCTGCAATATGTTATGACTCTGGGGGCCCATGGTGCGCATCAATTCTAA

Upstream 100 bases:

>100_bases
TGGTCCACCACTCGCTCCTTAAATACATATTGCATTGAAAAGTTAACTATTTCCCGATGGTCAACCGCCGTCGGGGTCTT
GCTGTATTTTTGGAGAATTT

Downstream 100 bases:

>100_bases
GTTGCTCGGGGGCCTGCTGGCCCTCACTCTGGGCCACAGCGCCAGTGCCGTGGCCGGTTTGAATATCTTTGCCTGTGAGC
CCGAATACGCGGCACTGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MNTFRLSVLASALISAAAAAETPTLGNPAISAVLDGYYQSGDRALGGREEGFGLGESELAISANIDDLFYGKLTAVIEAH
DGETELELEEAFVQTLALPGGLSVRAGRFLSDVGYLNNQHLHSDAFAGRPAVYRAFLGSHYFDDGLRLSWVAPTDLYWTF
GVEGFKGDKMRAEDEHGEREFDTVGVYNAFTKLGGDIGDNSSWQLGLAYMKNQNGRLTPHEEGEEVHEEDEHAHDHSHSA
AYTGENTYVADFVYKWAPNGNYKYQHLTLSGEFFRVNDFKAPELHEEEHEEEEGHEHAHDKDYHQGWYLSGVYQFSPSWS
AGLRYGELDTQLAHDDHYDAQKLKETEVSLNWHHSHFSTVRLQYTRQQGTNFDGISDDNLFTLQYVMTLGAHGAHQF

Sequences:

>Translated_397_residues
MNTFRLSVLASALISAAAAAETPTLGNPAISAVLDGYYQSGDRALGGREEGFGLGESELAISANIDDLFYGKLTAVIEAH
DGETELELEEAFVQTLALPGGLSVRAGRFLSDVGYLNNQHLHSDAFAGRPAVYRAFLGSHYFDDGLRLSWVAPTDLYWTF
GVEGFKGDKMRAEDEHGEREFDTVGVYNAFTKLGGDIGDNSSWQLGLAYMKNQNGRLTPHEEGEEVHEEDEHAHDHSHSA
AYTGENTYVADFVYKWAPNGNYKYQHLTLSGEFFRVNDFKAPELHEEEHEEEEGHEHAHDKDYHQGWYLSGVYQFSPSWS
AGLRYGELDTQLAHDDHYDAQKLKETEVSLNWHHSHFSTVRLQYTRQQGTNFDGISDDNLFTLQYVMTLGAHGAHQF
>Mature_397_residues
MNTFRLSVLASALISAAAAAETPTLGNPAISAVLDGYYQSGDRALGGREEGFGLGESELAISANIDDLFYGKLTAVIEAH
DGETELELEEAFVQTLALPGGLSVRAGRFLSDVGYLNNQHLHSDAFAGRPAVYRAFLGSHYFDDGLRLSWVAPTDLYWTF
GVEGFKGDKMRAEDEHGEREFDTVGVYNAFTKLGGDIGDNSSWQLGLAYMKNQNGRLTPHEEGEEVHEEDEHAHDHSHSA
AYTGENTYVADFVYKWAPNGNYKYQHLTLSGEFFRVNDFKAPELHEEEHEEEEGHEHAHDKDYHQGWYLSGVYQFSPSWS
AGLRYGELDTQLAHDDHYDAQKLKETEVSLNWHHSHFSTVRLQYTRQQGTNFDGISDDNLFTLQYVMTLGAHGAHQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44468; Mature: 44468

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTFRLSVLASALISAAAAAETPTLGNPAISAVLDGYYQSGDRALGGREEGFGLGESELA
CCEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
ISANIDDLFYGKLTAVIEAHDGETELELEEAFVQTLALPGGLSVRAGRFLSDVGYLNNQH
EECCCCHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCC
LHSDAFAGRPAVYRAFLGSHYFDDGLRLSWVAPTDLYWTFGVEGFKGDKMRAEDEHGERE
CCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCC
FDTVGVYNAFTKLGGDIGDNSSWQLGLAYMKNQNGRLTPHEEGEEVHEEDEHAHDHSHSA
HHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCC
AYTGENTYVADFVYKWAPNGNYKYQHLTLSGEFFRVNDFKAPELHEEEHEEEEGHEHAHD
EECCCCCEEEEEEEEECCCCCEEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHCCCC
KDYHQGWYLSGVYQFSPSWSAGLRYGELDTQLAHDDHYDAQKLKETEVSLNWHHSHFSTV
CCCCCCEEEEEEEEECCCHHHCCEECCCCCHHCCCCCCCHHHHHHHHEEEEEECCCEEEE
RLQYTRQQGTNFDGISDDNLFTLQYVMTLGAHGAHQF
EEEEECCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNTFRLSVLASALISAAAAAETPTLGNPAISAVLDGYYQSGDRALGGREEGFGLGESELA
CCEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
ISANIDDLFYGKLTAVIEAHDGETELELEEAFVQTLALPGGLSVRAGRFLSDVGYLNNQH
EECCCCHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCC
LHSDAFAGRPAVYRAFLGSHYFDDGLRLSWVAPTDLYWTFGVEGFKGDKMRAEDEHGERE
CCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCC
FDTVGVYNAFTKLGGDIGDNSSWQLGLAYMKNQNGRLTPHEEGEEVHEEDEHAHDHSHSA
HHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCC
AYTGENTYVADFVYKWAPNGNYKYQHLTLSGEFFRVNDFKAPELHEEEHEEEEGHEHAHD
EECCCCCEEEEEEEEECCCCCEEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHCCCC
KDYHQGWYLSGVYQFSPSWSAGLRYGELDTQLAHDDHYDAQKLKETEVSLNWHHSHFSTV
CCCCCCEEEEEEEEECCCHHHCCEECCCCCHHCCCCCCCHHHHHHHHEEEEEECCCEEEE
RLQYTRQQGTNFDGISDDNLFTLQYVMTLGAHGAHQF
EEEEECCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]