Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776275

Identifier: 119776275

GI number: 119776275

Start: 3730736

End: 3731029

Strand: Reverse

Name: 119776275

Synonym: Sama_3143

Alternate gene names: NA

Gene position: 3731029-3730736 (Counterclockwise)

Preceding gene: 119776276

Following gene: 119776274

Centisome position: 86.64

GC content: 56.8

Gene sequence:

>294_bases
GTGCAATTTCCAAGGCGCAAAATTCATCGACTTATCGCTGTATGGCTTTCTGCCGTACTGGTGCTTTTGTCGTTTATTGC
TGCCGCCCACGCCACGACCCACCTCGATGAAGGAGGGTACAATCACTGTACCCTCTGCTTCCATCAGCATCAGCTGAACA
AGCTCCTGCCCGGGGTGAACCTGCCCAAGGTGCCCCTGCTACAGGTGTTCGAGCAACCCCAGACTCCGCTGTTTACTTCA
GTGGAGTCGGTCCGTCCACAGCCCCAGGCCCGTGGTCCACCACTCGCTCCTTAA

Upstream 100 bases:

>100_bases
ATGAATAACATTCTGTAACTTTTCTACTGCGATCACGGTTGCCAGCCTATTTGGGCTGCCGTAAACTTGAGCCGCTTCAC
AAATCACCGGAGTAGGGTGC

Downstream 100 bases:

>100_bases
ATACATATTGCATTGAAAAGTTAACTATTTCCCGATGGTCAACCGCCGTCGGGGTCTTGCTGTATTTTTGGAGAATTTAT
GAACACCTTTCGTTTGTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MQFPRRKIHRLIAVWLSAVLVLLSFIAAAHATTHLDEGGYNHCTLCFHQHQLNKLLPGVNLPKVPLLQVFEQPQTPLFTS
VESVRPQPQARGPPLAP

Sequences:

>Translated_97_residues
MQFPRRKIHRLIAVWLSAVLVLLSFIAAAHATTHLDEGGYNHCTLCFHQHQLNKLLPGVNLPKVPLLQVFEQPQTPLFTS
VESVRPQPQARGPPLAP
>Mature_97_residues
MQFPRRKIHRLIAVWLSAVLVLLSFIAAAHATTHLDEGGYNHCTLCFHQHQLNKLLPGVNLPKVPLLQVFEQPQTPLFTS
VESVRPQPQARGPPLAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10848; Mature: 10848

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFPRRKIHRLIAVWLSAVLVLLSFIAAAHATTHLDEGGYNHCTLCFHQHQLNKLLPGVN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
LPKVPLLQVFEQPQTPLFTSVESVRPQPQARGPPLAP
CCCCHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MQFPRRKIHRLIAVWLSAVLVLLSFIAAAHATTHLDEGGYNHCTLCFHQHQLNKLLPGVN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
LPKVPLLQVFEQPQTPLFTSVESVRPQPQARGPPLAP
CCCCHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA