| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119776188
Identifier: 119776188
GI number: 119776188
Start: 3632112
End: 3632576
Strand: Direct
Name: 119776188
Synonym: Sama_3056
Alternate gene names: NA
Gene position: 3632112-3632576 (Clockwise)
Preceding gene: 119776184
Following gene: 119776191
Centisome position: 84.35
GC content: 47.96
Gene sequence:
>465_bases ATGAATGTCGAATTTATCAATCCGTTTCTACAATCTCTGCTCAATGTTGTCTCAACTATGGCGTCGATGCAGCTCACTCC GGGTAAGCCCCGGCTGAAAACCGATAATCTTGCCAAGGGGGATGTATCAGGGCTGATTGGCATGGTAGGCCCTCAGACCA AGGGCTCTATGTCCATCACGTTTGAGCAAAGTCTGGCGCTGCAGATAATGCAAAATATGCTGGGCGAAAATCCGGGGACC ATCAATGATGAGGTCACAGATATGGTGGGTGAAATCACCAATATGGTCACAGGCGGCGCCAAAAATCTCTTGAGTGACAA AGGATACGATTTTGAAATGGCAACCCCTGTGGTGGTCGCTGGTACGGGTCATAGAATTTCCCACAAGGCCGATGGCACCA AAATTATCATGCCATTCACCAGCCCCTATGGCACTGCGTACATTGAGATTTGTTTTGAAAATTAG
Upstream 100 bases:
>100_bases GGGTAAAAGTTCACTCCGGTGCATAAATTCATCTACGCTTATGGGTATGTGGTCACCATCAGGGGGTCGCTCCCAGGCTA TCAGCGAGGAATCGCCAAGC
Downstream 100 bases:
>100_bases TGCTGTACTGAAGTAAAACAGGCGCTCACATGAGCGCCTGTTTTATTTTAATCGAGGCAAACTGCCACTCGCGGGGTTAA CTTGGTCACCAGCTCATAGG
Product: putative chemotaxis protein CheX
Products: NA
Alternate protein names: CheC Domain Protein; CheC Domain-Containing Protein; CheC-Like Protein; Inhibitor Of MCP Methylation; Inhibitor Of MCP Methylation CheC-Like Protein; CheC-Like Family Protein; Chec Domain Protein; Inhibitor Of MCP Methylation CheC N; Chemotaxis Protein Phosphatase CheX; Chemotaxis Protein; Inhibitor Of MCP Methylation CheC-Like
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MNVEFINPFLQSLLNVVSTMASMQLTPGKPRLKTDNLAKGDVSGLIGMVGPQTKGSMSITFEQSLALQIMQNMLGENPGT INDEVTDMVGEITNMVTGGAKNLLSDKGYDFEMATPVVVAGTGHRISHKADGTKIIMPFTSPYGTAYIEICFEN
Sequences:
>Translated_154_residues MNVEFINPFLQSLLNVVSTMASMQLTPGKPRLKTDNLAKGDVSGLIGMVGPQTKGSMSITFEQSLALQIMQNMLGENPGT INDEVTDMVGEITNMVTGGAKNLLSDKGYDFEMATPVVVAGTGHRISHKADGTKIIMPFTSPYGTAYIEICFEN >Mature_154_residues MNVEFINPFLQSLLNVVSTMASMQLTPGKPRLKTDNLAKGDVSGLIGMVGPQTKGSMSITFEQSLALQIMQNMLGENPGT INDEVTDMVGEITNMVTGGAKNLLSDKGYDFEMATPVVVAGTGHRISHKADGTKIIMPFTSPYGTAYIEICFEN
Specific function: Unknown
COG id: COG1406
COG function: function code N; Predicted inhibitor of MCP methylation, homolog of CheC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16535; Mature: 16535
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVEFINPFLQSLLNVVSTMASMQLTPGKPRLKTDNLAKGDVSGLIGMVGPQTKGSMSIT CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEE FEQSLALQIMQNMLGENPGTINDEVTDMVGEITNMVTGGAKNLLSDKGYDFEMATPVVVA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEECCCCEEEE GTGHRISHKADGTKIIMPFTSPYGTAYIEICFEN CCCCEECCCCCCCEEEEECCCCCCCEEEEEEECC >Mature Secondary Structure MNVEFINPFLQSLLNVVSTMASMQLTPGKPRLKTDNLAKGDVSGLIGMVGPQTKGSMSIT CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEE FEQSLALQIMQNMLGENPGTINDEVTDMVGEITNMVTGGAKNLLSDKGYDFEMATPVVVA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEECCCCEEEE GTGHRISHKADGTKIIMPFTSPYGTAYIEICFEN CCCCEECCCCCCCEEEEECCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA