Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776188

Identifier: 119776188

GI number: 119776188

Start: 3632112

End: 3632576

Strand: Direct

Name: 119776188

Synonym: Sama_3056

Alternate gene names: NA

Gene position: 3632112-3632576 (Clockwise)

Preceding gene: 119776184

Following gene: 119776191

Centisome position: 84.35

GC content: 47.96

Gene sequence:

>465_bases
ATGAATGTCGAATTTATCAATCCGTTTCTACAATCTCTGCTCAATGTTGTCTCAACTATGGCGTCGATGCAGCTCACTCC
GGGTAAGCCCCGGCTGAAAACCGATAATCTTGCCAAGGGGGATGTATCAGGGCTGATTGGCATGGTAGGCCCTCAGACCA
AGGGCTCTATGTCCATCACGTTTGAGCAAAGTCTGGCGCTGCAGATAATGCAAAATATGCTGGGCGAAAATCCGGGGACC
ATCAATGATGAGGTCACAGATATGGTGGGTGAAATCACCAATATGGTCACAGGCGGCGCCAAAAATCTCTTGAGTGACAA
AGGATACGATTTTGAAATGGCAACCCCTGTGGTGGTCGCTGGTACGGGTCATAGAATTTCCCACAAGGCCGATGGCACCA
AAATTATCATGCCATTCACCAGCCCCTATGGCACTGCGTACATTGAGATTTGTTTTGAAAATTAG

Upstream 100 bases:

>100_bases
GGGTAAAAGTTCACTCCGGTGCATAAATTCATCTACGCTTATGGGTATGTGGTCACCATCAGGGGGTCGCTCCCAGGCTA
TCAGCGAGGAATCGCCAAGC

Downstream 100 bases:

>100_bases
TGCTGTACTGAAGTAAAACAGGCGCTCACATGAGCGCCTGTTTTATTTTAATCGAGGCAAACTGCCACTCGCGGGGTTAA
CTTGGTCACCAGCTCATAGG

Product: putative chemotaxis protein CheX

Products: NA

Alternate protein names: CheC Domain Protein; CheC Domain-Containing Protein; CheC-Like Protein; Inhibitor Of MCP Methylation; Inhibitor Of MCP Methylation CheC-Like Protein; CheC-Like Family Protein; Chec Domain Protein; Inhibitor Of MCP Methylation CheC N; Chemotaxis Protein Phosphatase CheX; Chemotaxis Protein; Inhibitor Of MCP Methylation CheC-Like

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MNVEFINPFLQSLLNVVSTMASMQLTPGKPRLKTDNLAKGDVSGLIGMVGPQTKGSMSITFEQSLALQIMQNMLGENPGT
INDEVTDMVGEITNMVTGGAKNLLSDKGYDFEMATPVVVAGTGHRISHKADGTKIIMPFTSPYGTAYIEICFEN

Sequences:

>Translated_154_residues
MNVEFINPFLQSLLNVVSTMASMQLTPGKPRLKTDNLAKGDVSGLIGMVGPQTKGSMSITFEQSLALQIMQNMLGENPGT
INDEVTDMVGEITNMVTGGAKNLLSDKGYDFEMATPVVVAGTGHRISHKADGTKIIMPFTSPYGTAYIEICFEN
>Mature_154_residues
MNVEFINPFLQSLLNVVSTMASMQLTPGKPRLKTDNLAKGDVSGLIGMVGPQTKGSMSITFEQSLALQIMQNMLGENPGT
INDEVTDMVGEITNMVTGGAKNLLSDKGYDFEMATPVVVAGTGHRISHKADGTKIIMPFTSPYGTAYIEICFEN

Specific function: Unknown

COG id: COG1406

COG function: function code N; Predicted inhibitor of MCP methylation, homolog of CheC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16535; Mature: 16535

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVEFINPFLQSLLNVVSTMASMQLTPGKPRLKTDNLAKGDVSGLIGMVGPQTKGSMSIT
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEE
FEQSLALQIMQNMLGENPGTINDEVTDMVGEITNMVTGGAKNLLSDKGYDFEMATPVVVA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEECCCCEEEE
GTGHRISHKADGTKIIMPFTSPYGTAYIEICFEN
CCCCEECCCCCCCEEEEECCCCCCCEEEEEEECC
>Mature Secondary Structure
MNVEFINPFLQSLLNVVSTMASMQLTPGKPRLKTDNLAKGDVSGLIGMVGPQTKGSMSIT
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEE
FEQSLALQIMQNMLGENPGTINDEVTDMVGEITNMVTGGAKNLLSDKGYDFEMATPVVVA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEECCCCEEEE
GTGHRISHKADGTKIIMPFTSPYGTAYIEICFEN
CCCCEECCCCCCCEEEEECCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA