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The map label for this gene is 119776174

Identifier: 119776174

GI number: 119776174

Start: 3619860

End: 3621035

Strand: Reverse

Name: 119776174

Synonym: Sama_3042

Alternate gene names: NA

Gene position: 3621035-3619860 (Counterclockwise)

Preceding gene: 119776175

Following gene: 119776173

Centisome position: 84.09

GC content: 53.91

Gene sequence:

>1176_bases
ATGTTGCCTGCCCATGATAACGATAACAGGCTAAAGAGAATGTTGAGTAATACACACCTCGGCCGCATGCTGATTGCCTG
CCTCGCCTGTATAGCGACGCAGACCCAGGCCGAGCAAACGATGACAATTACCGTCACCAAGGGCTTTGGTATCACCCAAT
ATGCCTCGGAGCTTGAGGATGCCAAGCAGCTTGCCGTCGGTGATAATGGCACCCTGTTTGTGGGCTCCGGCAAAGGCGGC
ACCATCACGGCCCTGGTCGACAGCAACAACGACGGGCGAGTGGATCGCCGCTATGTTGTGGGTAAAGGCCTGGATAATCC
TGAGGCCATCGCTTTTCACAAGGGTCATCTTTATGTGGCGTTGGATGAAAAAATCCTGCGTTATGAAGAAATTGAGCAGC
GCCTTCGCCGCCCTGGCCGCCCCAAAGAGATTTACTCCAAACTCCCCGGCGATACCAAAAAGAGTGCCCGCTATATGGCG
TTTGGTCCCGATGGCAGACTTTATATCGCCATAGGCTCACCCTGTAACGTGTGTGAGTCTGAATCACCGTTTGGCTCTGT
TATTGCCATCGATGTGGATACCGGTGCCAGTGAGCAGATAGCGACCGGGGTACGAACCGTGCGCGGTATGGACTGGGATC
CGCAAGATGGCAAGCTGTGGTTTGCCGATATAGGCCGCGACTGGATGGGTGACAACCTGCCTCCGGATGAAATAAACCGA
ATCGATATCAAGGGTATGCACTATGGGTTTCCCTATGTGCATGCCAGCGATGTGATTGAGCCTGCCTACGAAAAGCCTGA
AAACCTCAAGGTTGTGAGCCCGGTTTATGAGCTGCCAGCTCACGTGTCTCCCATGGGGATGCTGTTTTATCGCGGCGAGC
AATTCCCGGCGGAATATCATAACCAGTTGCTGGTGGCAGAAAACGGCTCCTGGAACCGCTCGAGCAAAATTGGCTACCAG
ATAGTCGTCCTGACCCTGGATAAGGGCGAAGTAAAGCGCCGCGAGACACTGATAAGCTTTCTGGATGGTGAGTTTCCGGT
TGCCCGCCCCTATGGCATGGCATTGGGCGCCGACGGTTCACTGTTTATCTCAGACGATTTGAAAGGCAACGTTTACCGGT
TCTTCTACAGGCATGAAGCCGAAGAAGAGGCGCCAACGCAGGAAGAGCAACCATGA

Upstream 100 bases:

>100_bases
GTGACGATACCGTCGCGCTGATGGACATGTTGCTGGCGAAAAAGCGCTCCGGCGACAGAAAAACTTGGCTTGAAACCAAA
GGCGATCTGGCAATCATCTG

Downstream 100 bases:

>100_bases
GTGACGCCATTGACTTAAGCCTGGATGGTGTGGAGCAAATGCCCTTGAGGCGCTTCACCGAAGAGGCCTATCTCAACTAT
TCCATGTACGTAATCATGGA

Product: L-sorbosone dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MLPAHDNDNRLKRMLSNTHLGRMLIACLACIATQTQAEQTMTITVTKGFGITQYASELEDAKQLAVGDNGTLFVGSGKGG
TITALVDSNNDGRVDRRYVVGKGLDNPEAIAFHKGHLYVALDEKILRYEEIEQRLRRPGRPKEIYSKLPGDTKKSARYMA
FGPDGRLYIAIGSPCNVCESESPFGSVIAIDVDTGASEQIATGVRTVRGMDWDPQDGKLWFADIGRDWMGDNLPPDEINR
IDIKGMHYGFPYVHASDVIEPAYEKPENLKVVSPVYELPAHVSPMGMLFYRGEQFPAEYHNQLLVAENGSWNRSSKIGYQ
IVVLTLDKGEVKRRETLISFLDGEFPVARPYGMALGADGSLFISDDLKGNVYRFFYRHEAEEEAPTQEEQP

Sequences:

>Translated_391_residues
MLPAHDNDNRLKRMLSNTHLGRMLIACLACIATQTQAEQTMTITVTKGFGITQYASELEDAKQLAVGDNGTLFVGSGKGG
TITALVDSNNDGRVDRRYVVGKGLDNPEAIAFHKGHLYVALDEKILRYEEIEQRLRRPGRPKEIYSKLPGDTKKSARYMA
FGPDGRLYIAIGSPCNVCESESPFGSVIAIDVDTGASEQIATGVRTVRGMDWDPQDGKLWFADIGRDWMGDNLPPDEINR
IDIKGMHYGFPYVHASDVIEPAYEKPENLKVVSPVYELPAHVSPMGMLFYRGEQFPAEYHNQLLVAENGSWNRSSKIGYQ
IVVLTLDKGEVKRRETLISFLDGEFPVARPYGMALGADGSLFISDDLKGNVYRFFYRHEAEEEAPTQEEQP
>Mature_391_residues
MLPAHDNDNRLKRMLSNTHLGRMLIACLACIATQTQAEQTMTITVTKGFGITQYASELEDAKQLAVGDNGTLFVGSGKGG
TITALVDSNNDGRVDRRYVVGKGLDNPEAIAFHKGHLYVALDEKILRYEEIEQRLRRPGRPKEIYSKLPGDTKKSARYMA
FGPDGRLYIAIGSPCNVCESESPFGSVIAIDVDTGASEQIATGVRTVRGMDWDPQDGKLWFADIGRDWMGDNLPPDEINR
IDIKGMHYGFPYVHASDVIEPAYEKPENLKVVSPVYELPAHVSPMGMLFYRGEQFPAEYHNQLLVAENGSWNRSSKIGYQ
IVVLTLDKGEVKRRETLISFLDGEFPVARPYGMALGADGSLFISDDLKGNVYRFFYRHEAEEEAPTQEEQP

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.liquefaciens L-sorbosone dehydrogenase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 43560; Mature: 43560

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPAHDNDNRLKRMLSNTHLGRMLIACLACIATQTQAEQTMTITVTKGFGITQYASELED
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHH
AKQLAVGDNGTLFVGSGKGGTITALVDSNNDGRVDRRYVVGKGLDNPEAIAFHKGHLYVA
HHHEEECCCCEEEEECCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCEEEEECCEEEEE
LDEKILRYEEIEQRLRRPGRPKEIYSKLPGDTKKSARYMAFGPDGRLYIAIGSPCNVCES
ECHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHCCEEEEECCCCEEEEEECCCCCCCCC
ESPFGSVIAIDVDTGASEQIATGVRTVRGMDWDPQDGKLWFADIGRDWMGDNLPPDEINR
CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCCCCCCCCCCE
IDIKGMHYGFPYVHASDVIEPAYEKPENLKVVSPVYELPAHVSPMGMLFYRGEQFPAEYH
EEEEEEECCCCCEEHHHHHHHHHCCCCCCEEECHHHHCCCCCCCCEEEEECCCCCCHHHC
NQLLVAENGSWNRSSKIGYQIVVLTLDKGEVKRRETLISFLDGEFPVARPYGMALGADGS
CEEEEEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCC
LFISDDLKGNVYRFFYRHEAEEEAPTQEEQP
EEEECCCCCCEEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MLPAHDNDNRLKRMLSNTHLGRMLIACLACIATQTQAEQTMTITVTKGFGITQYASELED
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHH
AKQLAVGDNGTLFVGSGKGGTITALVDSNNDGRVDRRYVVGKGLDNPEAIAFHKGHLYVA
HHHEEECCCCEEEEECCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCEEEEECCEEEEE
LDEKILRYEEIEQRLRRPGRPKEIYSKLPGDTKKSARYMAFGPDGRLYIAIGSPCNVCES
ECHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHCCEEEEECCCCEEEEEECCCCCCCCC
ESPFGSVIAIDVDTGASEQIATGVRTVRGMDWDPQDGKLWFADIGRDWMGDNLPPDEINR
CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCCCCCCCCCCE
IDIKGMHYGFPYVHASDVIEPAYEKPENLKVVSPVYELPAHVSPMGMLFYRGEQFPAEYH
EEEEEEECCCCCEEHHHHHHHHHCCCCCCEEECHHHHCCCCCCCCEEEEECCCCCCHHHC
NQLLVAENGSWNRSSKIGYQIVVLTLDKGEVKRRETLISFLDGEFPVARPYGMALGADGS
CEEEEEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCC
LFISDDLKGNVYRFFYRHEAEEEAPTQEEQP
EEEECCCCCCEEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]