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The map label for this gene is rsgA [H]

Identifier: 119776165

GI number: 119776165

Start: 3608786

End: 3609841

Strand: Direct

Name: rsgA [H]

Synonym: Sama_3033

Alternate gene names: 119776165

Gene position: 3608786-3609841 (Clockwise)

Preceding gene: 119776148

Following gene: 119776166

Centisome position: 83.81

GC content: 52.84

Gene sequence:

>1056_bases
GTGAGTAAAAAGAAACCTCTCAGTCATGGCCAATTGCGCCGTATGCGCGCCAATCATGAAAAGCGGCTCAGCCGCGGCAA
GCTCGACAACCAAGCACCTGAATTACAGGATAGTTCACTCGGTCAGGAAGAACCCGCGGTGGTCATTTCCCGCTTCGGTC
AGCATGCCGATGTGGAGATCAGCAGTGGTGAAATCATTCGCTGCAACATTCGCAGAACCATACAAAGCTTGGTTACCGGA
GATAAGGTGATTATCCGTCAGGCGCTGGAAGATGGCAGCGCCATTGGTGGCGTGGTGGAAGCCGTGCATCCCCGCACCTC
GTCACTGACCCGACCGGATTTGTATGACGGCGTAAAAATCATTGCCGCCAATATCGACCAGATCCTGATTGTTTCCTCCG
TTGTGCCAGCCTTTACTACGCAGATAATTGACCGATATTTGGTTGCCTCGGAAGACACGGGGATTTCGCCCGTTATCATC
CTCAATAAAATCGACCTGATGAATGATGAGGACAGAGCCGATATCGAAGCCGCGCTCGGCAGATACCGCTCGCTGGGATA
CCCGGTATACGAAGTCAGCAGTAAATCAAAAGCCGGTATCGACACGGTAAAAGCATTACTTAACGACAAAATCAGTGTGT
TTGTCGGCCAGTCCGGCGTGGGTAAGTCTTCCATGATCAATGCCTTGCTGCCCGATGCAGAACTGCTGACCGGCGAAGTA
TCCGAAGGCTCGGGCCTTGGCCAACACACCACCACCACCGCCAGATTGTTGCACTTGCCAAGCGGTGGCGATCTGATAGA
TTCCCCCGGCGTACGCGAATTCGCCCTCTGGCATCTTCCCCCAGACCGAGTCAGCTGGTGCTTCACTGAATTTCGCGACT
ACCTCGGCACCTGTAAATTCCGTGATTGTAAACACCTGGATGATCCGGGCTGCAGTCTTCGCGAAGCACTGGAAGCCGGC
AAAATCCATCAGGACAGATTCAATAATTATCACAGGATCATCGCCAGTCTGGATGAACAGCGTCACGCACGTCATTTCAG
ACACAACGAAGAATGA

Upstream 100 bases:

>100_bases
TTTGGTTCCCGTGCCGTATTTTCAGGCTTTTTTGTCAAAGACCGTGTATCATAATGCTTTTTATCCCCAACCACATCAGA
TTATTGACGAAGATAGCTTT

Downstream 100 bases:

>100_bases
TCCGGCAACAAATTGAAAGCAAAAGGACAACGACAAGTGGATAAAGTGAAAATCGCCCTTCAATACCTGATGCCCAAACA
TTTGGTATCACGCATCGTGG

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSKKKPLSHGQLRRMRANHEKRLSRGKLDNQAPELQDSSLGQEEPAVVISRFGQHADVEISSGEIIRCNIRRTIQSLVTG
DKVIIRQALEDGSAIGGVVEAVHPRTSSLTRPDLYDGVKIIAANIDQILIVSSVVPAFTTQIIDRYLVASEDTGISPVII
LNKIDLMNDEDRADIEAALGRYRSLGYPVYEVSSKSKAGIDTVKALLNDKISVFVGQSGVGKSSMINALLPDAELLTGEV
SEGSGLGQHTTTTARLLHLPSGGDLIDSPGVREFALWHLPPDRVSWCFTEFRDYLGTCKFRDCKHLDDPGCSLREALEAG
KIHQDRFNNYHRIIASLDEQRHARHFRHNEE

Sequences:

>Translated_351_residues
MSKKKPLSHGQLRRMRANHEKRLSRGKLDNQAPELQDSSLGQEEPAVVISRFGQHADVEISSGEIIRCNIRRTIQSLVTG
DKVIIRQALEDGSAIGGVVEAVHPRTSSLTRPDLYDGVKIIAANIDQILIVSSVVPAFTTQIIDRYLVASEDTGISPVII
LNKIDLMNDEDRADIEAALGRYRSLGYPVYEVSSKSKAGIDTVKALLNDKISVFVGQSGVGKSSMINALLPDAELLTGEV
SEGSGLGQHTTTTARLLHLPSGGDLIDSPGVREFALWHLPPDRVSWCFTEFRDYLGTCKFRDCKHLDDPGCSLREALEAG
KIHQDRFNNYHRIIASLDEQRHARHFRHNEE
>Mature_350_residues
SKKKPLSHGQLRRMRANHEKRLSRGKLDNQAPELQDSSLGQEEPAVVISRFGQHADVEISSGEIIRCNIRRTIQSLVTGD
KVIIRQALEDGSAIGGVVEAVHPRTSSLTRPDLYDGVKIIAANIDQILIVSSVVPAFTTQIIDRYLVASEDTGISPVIIL
NKIDLMNDEDRADIEAALGRYRSLGYPVYEVSSKSKAGIDTVKALLNDKISVFVGQSGVGKSSMINALLPDAELLTGEVS
EGSGLGQHTTTTARLLHLPSGGDLIDSPGVREFALWHLPPDRVSWCFTEFRDYLGTCKFRDCKHLDDPGCSLREALEAGK
IHQDRFNNYHRIIASLDEQRHARHFRHNEE

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=349, Percent_Identity=55.8739255014327, Blast_Score=396, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 38820; Mature: 38689

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKKPLSHGQLRRMRANHEKRLSRGKLDNQAPELQDSSLGQEEPAVVISRFGQHADVEI
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEE
SSGEIIRCNIRRTIQSLVTGDKVIIRQALEDGSAIGGVVEAVHPRTSSLTRPDLYDGVKI
CCCCEEEEHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHCHHE
IAANIDQILIVSSVVPAFTTQIIDRYLVASEDTGISPVIILNKIDLMNDEDRADIEAALG
EECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
RYRSLGYPVYEVSSKSKAGIDTVKALLNDKISVFVGQSGVGKSSMINALLPDAELLTGEV
HHHHCCCCEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCHHHHCCCC
SEGSGLGQHTTTTARLLHLPSGGDLIDSPGVREFALWHLPPDRVSWCFTEFRDYLGTCKF
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCC
RDCKHLDDPGCSLREALEAGKIHQDRFNNYHRIIASLDEQRHARHFRHNEE
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SKKKPLSHGQLRRMRANHEKRLSRGKLDNQAPELQDSSLGQEEPAVVISRFGQHADVEI
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEE
SSGEIIRCNIRRTIQSLVTGDKVIIRQALEDGSAIGGVVEAVHPRTSSLTRPDLYDGVKI
CCCCEEEEHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHCHHE
IAANIDQILIVSSVVPAFTTQIIDRYLVASEDTGISPVIILNKIDLMNDEDRADIEAALG
EECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
RYRSLGYPVYEVSSKSKAGIDTVKALLNDKISVFVGQSGVGKSSMINALLPDAELLTGEV
HHHHCCCCEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCHHHHCCCC
SEGSGLGQHTTTTARLLHLPSGGDLIDSPGVREFALWHLPPDRVSWCFTEFRDYLGTCKF
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCC
RDCKHLDDPGCSLREALEAGKIHQDRFNNYHRIIASLDEQRHARHFRHNEE
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]