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The map label for this gene is petA [H]

Identifier: 119776153

GI number: 119776153

Start: 3595339

End: 3595929

Strand: Reverse

Name: petA [H]

Synonym: Sama_3021

Alternate gene names: 119776153

Gene position: 3595929-3595339 (Counterclockwise)

Preceding gene: 119776154

Following gene: 119776152

Centisome position: 83.51

GC content: 54.82

Gene sequence:

>591_bases
ATGAGCAATGCGCCAGTCGATTCCGGACGTCGCAGATTCCTGACAGCCGCAACCGCTGTAGTTGGCGGTGCTGGTGCCGT
CGCTGTAGCGGTTCCTTTTATCAAGTCATGGAATCCGAGCGCCAAGGCGAAAGCTGCAGGTGCGCCGGTAGAAGTTAATA
TCAGCAAGCTGGAACCAGGTCAGTTGATCCGTGTAGAGTGGCGCGGTAAACCCGTTTGGGTTGTACGCCGCACCGAGGAA
GTGCTTAAGCAACTTCCCGAGCTCGATGGGCAGCTGCGTGATCCTGCGTCTGATGAACTACAGCAACCCGTGTATGCCCA
AAACGGCGTACGTTCTATCAAGCCAGAGTACTTTATCGCTGTTGGTATCTGTACTCACCTGGGCTGTTCTCCTACCTATC
TGCCAGATTCATTTGGCGAGCAGGTTGAAGGTGTAAGCTCTGGCTTCTTCTGTCCTTGCCACGGCTCCAAGTTTGACATG
GCCGGCCGCGTATTCCAGGGTGTTCCTGCACCACTGAACCTGGTGATCCCTCCACACCAGTATCTTGACGATGCGAATGT
GATCATCGGTGTCGACGGGGAGACTGCATAA

Upstream 100 bases:

>100_bases
ATGAGCCCCGCCTCAAACTTTGATTTTGCTTCGGGATGGCCTATCTCAAAGCAACTTCTTGAAAAACAAAAAATTCCAAC
CCCCGCTGGGAGATATGTGG

Downstream 100 bases:

>100_bases
TGGTTAAGAACATTATCGATTGGATCGATGCCCGTATCCCAATGACGGCGACCTATAATCGTCATGTTGGTCAGTACGCG
ACCCCAAAGAACTTTAACTT

Product: ubiquinol--cytochrome-c reductase

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSNAPVDSGRRRFLTAATAVVGGAGAVAVAVPFIKSWNPSAKAKAAGAPVEVNISKLEPGQLIRVEWRGKPVWVVRRTEE
VLKQLPELDGQLRDPASDELQQPVYAQNGVRSIKPEYFIAVGICTHLGCSPTYLPDSFGEQVEGVSSGFFCPCHGSKFDM
AGRVFQGVPAPLNLVIPPHQYLDDANVIIGVDGETA

Sequences:

>Translated_196_residues
MSNAPVDSGRRRFLTAATAVVGGAGAVAVAVPFIKSWNPSAKAKAAGAPVEVNISKLEPGQLIRVEWRGKPVWVVRRTEE
VLKQLPELDGQLRDPASDELQQPVYAQNGVRSIKPEYFIAVGICTHLGCSPTYLPDSFGEQVEGVSSGFFCPCHGSKFDM
AGRVFQGVPAPLNLVIPPHQYLDDANVIIGVDGETA
>Mature_195_residues
SNAPVDSGRRRFLTAATAVVGGAGAVAVAVPFIKSWNPSAKAKAAGAPVEVNISKLEPGQLIRVEWRGKPVWVVRRTEEV
LKQLPELDGQLRDPASDELQQPVYAQNGVRSIKPEYFIAVGICTHLGCSPTYLPDSFGEQVEGVSSGFFCPCHGSKFDMA
GRVFQGVPAPLNLVIPPHQYLDDANVIIGVDGETA

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=180, Percent_Identity=37.7777777777778, Blast_Score=114, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17540418, Length=180, Percent_Identity=35.5555555555556, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6320811, Length=191, Percent_Identity=37.17277486911, Blast_Score=116, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24580896, Length=161, Percent_Identity=36.0248447204969, Blast_Score=109, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 20952; Mature: 20821

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAPVDSGRRRFLTAATAVVGGAGAVAVAVPFIKSWNPSAKAKAAGAPVEVNISKLEPG
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCC
QLIRVEWRGKPVWVVRRTEEVLKQLPELDGQLRDPASDELQQPVYAQNGVRSIKPEYFIA
CEEEEEECCCEEEEEECHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHCCCCCCCCCEEEE
VGICTHLGCSPTYLPDSFGEQVEGVSSGFFCPCHGSKFDMAGRVFQGVPAPLNLVIPPHQ
EEHHHHCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCHHHHCCCCCEEEEECCHH
YLDDANVIIGVDGETA
HCCCCCEEEECCCCCC
>Mature Secondary Structure 
SNAPVDSGRRRFLTAATAVVGGAGAVAVAVPFIKSWNPSAKAKAAGAPVEVNISKLEPG
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCC
QLIRVEWRGKPVWVVRRTEEVLKQLPELDGQLRDPASDELQQPVYAQNGVRSIKPEYFIA
CEEEEEECCCEEEEEECHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHCCCCCCCCCEEEE
VGICTHLGCSPTYLPDSFGEQVEGVSSGFFCPCHGSKFDMAGRVFQGVPAPLNLVIPPHQ
EEHHHHCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCHHHHCCCCCEEEEECCHH
YLDDANVIIGVDGETA
HCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA