Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776046

Identifier: 119776046

GI number: 119776046

Start: 3463857

End: 3464399

Strand: Direct

Name: 119776046

Synonym: Sama_2914

Alternate gene names: NA

Gene position: 3463857-3464399 (Clockwise)

Preceding gene: 119776045

Following gene: 119776047

Centisome position: 80.44

GC content: 52.85

Gene sequence:

>543_bases
ATGACGCATTGGCAGCAAATCATCGATTTTTGGTTCAGCGAAATCAGCCCCAAACAATGGTGGCAAAAGGATGCTGACTT
TGACCATCTGATTGCACAACGCTTTATCGAGGTGTTGGTCGCGGCCAAACGGGGGGAGCTCTTTGGCTGGCGGCAACACC
CGATGGGACGCCTTGCGGAGATTATCGTGCTCGATCAGTTTTCACGTAATGTGTACCGCGATACCCCGGCTGCCTTTGAA
GCCGACCCCATGGCATTGGTGCTGGCTCAGGAGGCCGTCGCTCTGGGAGTGGATAAGGCGCTGCCGGATAATATGGTGCC
CTTTTTATACATGCCCTACATGCACAGCGAGTCGGCCCTTATCCACGAAGAAGCCATGAAACTCTTTTCCCGCGAGGCCG
CCCGGGGCAACCTGGAGTTTGAGATTCGCCACAAGGCCATTATTGACCGATTTGGCCGTTATCCTCATAGAAACAATATA
TTAGGCCGAGAGTCCAGCGCAGATGAACTCGCTTTTTTACAAGAACCCGGTTCCTCATTCTAA

Upstream 100 bases:

>100_bases
TCCTGCCCTGGATCCCCTACAGCGAGGCCAGGACCATTGCTCTGGCCGCACTGACACAGCTGGACAAGCACAGAGGTAAC
TGGATTTAACCGGAGCACAA

Downstream 100 bases:

>100_bases
ATATTTGTTCCACCCGCTATTGCACAGGGAGTGAACTAAACTCAATACTGACTCGACAACCCAAGACGGCCCGCCGACAG
AGCGACTAAACAATAAAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MTHWQQIIDFWFSEISPKQWWQKDADFDHLIAQRFIEVLVAAKRGELFGWRQHPMGRLAEIIVLDQFSRNVYRDTPAAFE
ADPMALVLAQEAVALGVDKALPDNMVPFLYMPYMHSESALIHEEAMKLFSREAARGNLEFEIRHKAIIDRFGRYPHRNNI
LGRESSADELAFLQEPGSSF

Sequences:

>Translated_180_residues
MTHWQQIIDFWFSEISPKQWWQKDADFDHLIAQRFIEVLVAAKRGELFGWRQHPMGRLAEIIVLDQFSRNVYRDTPAAFE
ADPMALVLAQEAVALGVDKALPDNMVPFLYMPYMHSESALIHEEAMKLFSREAARGNLEFEIRHKAIIDRFGRYPHRNNI
LGRESSADELAFLQEPGSSF
>Mature_179_residues
THWQQIIDFWFSEISPKQWWQKDADFDHLIAQRFIEVLVAAKRGELFGWRQHPMGRLAEIIVLDQFSRNVYRDTPAAFEA
DPMALVLAQEAVALGVDKALPDNMVPFLYMPYMHSESALIHEEAMKLFSREAARGNLEFEIRHKAIIDRFGRYPHRNNIL
GRESSADELAFLQEPGSSF

Specific function: Unknown

COG id: COG3803

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20906; Mature: 20775

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: PS00414 PROFILIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHWQQIIDFWFSEISPKQWWQKDADFDHLIAQRFIEVLVAAKRGELFGWRQHPMGRLAE
CCHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHH
IIVLDQFSRNVYRDTPAAFEADPMALVLAQEAVALGVDKALPDNMVPFLYMPYMHSESAL
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHH
IHEEAMKLFSREAARGNLEFEIRHKAIIDRFGRYPHRNNILGRESSADELAFLQEPGSSF
HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
THWQQIIDFWFSEISPKQWWQKDADFDHLIAQRFIEVLVAAKRGELFGWRQHPMGRLAE
CHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHH
IIVLDQFSRNVYRDTPAAFEADPMALVLAQEAVALGVDKALPDNMVPFLYMPYMHSESAL
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHH
IHEEAMKLFSREAARGNLEFEIRHKAIIDRFGRYPHRNNILGRESSADELAFLQEPGSSF
HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA