Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775814

Identifier: 119775814

GI number: 119775814

Start: 3212088

End: 3213005

Strand: Direct

Name: 119775814

Synonym: Sama_2682

Alternate gene names: NA

Gene position: 3212088-3213005 (Clockwise)

Preceding gene: 119775813

Following gene: 119775815

Centisome position: 74.59

GC content: 56.1

Gene sequence:

>918_bases
ATGAGCAGTTCCCACCTCGCTGATGGATTCTGGGCATGCAAGTTTAAGGAGTCATGGCGACGTCAGCAGGCATGGCTTTG
CGCCCTCTTGTGGTCACTGAGCCTGCCGCTTTATGCCGCCGAGCCACTGAAAGACTACCGTCTGGAAGCCGCGGTTTATC
AGTGGTATGGCATGTTGGACTCAGGCAAAACATCGTCATTCAGCGGGCAGCAACTGGCCGTTACACTACCGGAATATCAG
GACGCTCAAGGCGGCGGTGCCCATCACATACTTGCCATCACACCACTGCTTGTCGACACGTCACTGTCCACCGGCTCACA
AGCGAACAGTAACTCAGCTATACAGGCTTCAGTGTCCCTGGAGTTTTTGCCTCCATCACCCGGCGACATGACCCGGGGAC
ACTACCTTGAAGTCACCATGCACTTTGACGCAGCCATGGCGCTTACGGCGCTCACGACCGAAGTGCACGAACAGGATGAC
TTCGACTCCCGCTTTCGCCCCTCGGCCGAGAGCAACCTTATCCGGGCGCTGATTTATCGCTGGACGGCTCAGCTGGATTC
ACCGGGCACGCTTCATCCACAGGGCCTGCCCCCGTTCACCAAAACAGCCAGTTTTATTGCCCCCGAAAAAGGCATCAACA
ATCCTGCGGCTTACCTTAACCACCTCAATAGCCTGCAACTTAAATCCAGCAGGCGGGAAATTAAAAATCTGATATTGCAA
TCAGGCGCCGAGCCCGGGGAATACCAGGTGAGCTTTGAATATCAGTGGCGGGCGCAAAACGCCCGAGGTGAAGAAGAGCT
ATCCCAGATCCAGGTCGACATGACTCTGGTTGTGACCGATGGGCAGGCAGTGATTTCTGCGTACAGGGAGCGCTTTCTCC
CGCCAGTAACCGACCTTGGCGCCGAAATCCGGTGCTGA

Upstream 100 bases:

>100_bases
ATACCTGGGTGCAAACGCCAAGATGTACGCGCGGACAGGTGAACGTCTGTCGTCTGCACCTTGCAGCGCCGGGCTGCAAG
GCCCGGCAAAGGAGTCTGAT

Downstream 100 bases:

>100_bases
ACCAGGAGACCCTTATGACAAACAAGCACACACAGTCAGCCATCTTCATTGGCAAATCCTTATCCATACTGGCGTTGCTG
CTGGCATTCGCCGGTTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSSSHLADGFWACKFKESWRRQQAWLCALLWSLSLPLYAAEPLKDYRLEAAVYQWYGMLDSGKTSSFSGQQLAVTLPEYQ
DAQGGGAHHILAITPLLVDTSLSTGSQANSNSAIQASVSLEFLPPSPGDMTRGHYLEVTMHFDAAMALTALTTEVHEQDD
FDSRFRPSAESNLIRALIYRWTAQLDSPGTLHPQGLPPFTKTASFIAPEKGINNPAAYLNHLNSLQLKSSRREIKNLILQ
SGAEPGEYQVSFEYQWRAQNARGEEELSQIQVDMTLVVTDGQAVISAYRERFLPPVTDLGAEIRC

Sequences:

>Translated_305_residues
MSSSHLADGFWACKFKESWRRQQAWLCALLWSLSLPLYAAEPLKDYRLEAAVYQWYGMLDSGKTSSFSGQQLAVTLPEYQ
DAQGGGAHHILAITPLLVDTSLSTGSQANSNSAIQASVSLEFLPPSPGDMTRGHYLEVTMHFDAAMALTALTTEVHEQDD
FDSRFRPSAESNLIRALIYRWTAQLDSPGTLHPQGLPPFTKTASFIAPEKGINNPAAYLNHLNSLQLKSSRREIKNLILQ
SGAEPGEYQVSFEYQWRAQNARGEEELSQIQVDMTLVVTDGQAVISAYRERFLPPVTDLGAEIRC
>Mature_304_residues
SSSHLADGFWACKFKESWRRQQAWLCALLWSLSLPLYAAEPLKDYRLEAAVYQWYGMLDSGKTSSFSGQQLAVTLPEYQD
AQGGGAHHILAITPLLVDTSLSTGSQANSNSAIQASVSLEFLPPSPGDMTRGHYLEVTMHFDAAMALTALTTEVHEQDDF
DSRFRPSAESNLIRALIYRWTAQLDSPGTLHPQGLPPFTKTASFIAPEKGINNPAAYLNHLNSLQLKSSRREIKNLILQS
GAEPGEYQVSFEYQWRAQNARGEEELSQIQVDMTLVVTDGQAVISAYRERFLPPVTDLGAEIRC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33856; Mature: 33725

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSHLADGFWACKFKESWRRQQAWLCALLWSLSLPLYAAEPLKDYRLEAAVYQWYGMLD
CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHCCC
SGKTSSFSGQQLAVTLPEYQDAQGGGAHHILAITPLLVDTSLSTGSQANSNSAIQASVSL
CCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEHEECCCCCCCCCCCCCEEEEEEEE
EFLPPSPGDMTRGHYLEVTMHFDAAMALTALTTEVHEQDDFDSRFRPSAESNLIRALIYR
EEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHH
WTAQLDSPGTLHPQGLPPFTKTASFIAPEKGINNPAAYLNHLNSLQLKSSRREIKNLILQ
HHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SGAEPGEYQVSFEYQWRAQNARGEEELSQIQVDMTLVVTDGQAVISAYRERFLPPVTDLG
CCCCCCCEEEEEEEEEECCCCCCHHHHHHEEEEEEEEEECCHHHHHHHHHHCCCCHHHCC
AEIRC
CCCCC
>Mature Secondary Structure 
SSSHLADGFWACKFKESWRRQQAWLCALLWSLSLPLYAAEPLKDYRLEAAVYQWYGMLD
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHCCC
SGKTSSFSGQQLAVTLPEYQDAQGGGAHHILAITPLLVDTSLSTGSQANSNSAIQASVSL
CCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEHEECCCCCCCCCCCCCEEEEEEEE
EFLPPSPGDMTRGHYLEVTMHFDAAMALTALTTEVHEQDDFDSRFRPSAESNLIRALIYR
EEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHH
WTAQLDSPGTLHPQGLPPFTKTASFIAPEKGINNPAAYLNHLNSLQLKSSRREIKNLILQ
HHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SGAEPGEYQVSFEYQWRAQNARGEEELSQIQVDMTLVVTDGQAVISAYRERFLPPVTDLG
CCCCCCCEEEEEEEEEECCCCCCHHHHHHEEEEEEEEEECCHHHHHHHHHHCCCCHHHCC
AEIRC
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA