BacMap

Definition	Shewanella amazonensis SB2B chromosome, complete genome.
Accession	NC_008700
Length	4,306,142

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The map label for this gene is gabD [H]

Identifier: 119775769

GI number: 119775769

Start: 3159228

End: 3160670

Strand: Reverse

Name: gabD [H]

Synonym: Sama_2637

Alternate gene names: 119775769

Gene position: 3160670-3159228 (Counterclockwise)

Preceding gene: 119775770

Following gene: 119775768

Centisome position: 73.4

GC content: 58.42

Gene sequence:

>1443_bases
GTGCAGCTCAAACGTCCTTCACTATTGAAAACAAAATGTTATATCAACGGCGAGTGGCGCGACGCCCTGTCGGGTGAGAC
GGTGACCATTGCCAATCCGGCCACCAATGAGGCCATCGCCTCTGTGCCCGTGATGGGCCGTGATGAAACCCGCGAGGCCA
TTGCCGCCGCGGAAGCGGCGCTGCCAGCCTGGCGTGCGCTTACCGCCAAGGAACGTGGCGCCAAACTGCGCCGCTGGTAT
GAGTTGATGCTGGAAAACGCCGATGATTTGGCGTTGATGATGACCACAGAGCAAGGAAAGCCTTTGGCCGAGGCCAAGGG
AGAGGTGGTGTATGCCGCCTCCTTTATCGAATGGTTTGCCGAAGAAGCCAAGCGCCTATATGGCGATACCATCCCGGGTC
ATCAGGGCGACAAGCGCATCATGGTGATTAAGCAGGGCGTGGGCGTAACGGCGGCCATTACCCCCTGGAACTTCCCTGCT
GCCATGATTACCCGCAAGGCCGGACCGGCGCTTGCCGCAGGCTGCACCATGATAGTGAAACCTGCACCTCAGACGCCTTT
CACCGCATTGGCGCTGGCAGAGCTCGCCGCAGAAGCGGGTATTCCACCCGGCGTATTCAGTGTGGTTACCGGTGATGCCG
TGGCTATTGGCAACGAGCTTTGCGAAAACCCAGTGGTGCGCAAGCTGTCGTTCACCGGTTCCACCGGCGTTGGTATCAAG
CTGATGCAGCAATGCGCGCCGACCCTGAAAAAGGTGTCGCTGGAGCTTGGCGGTAACGCACCATTCATCGTGTTTAACGA
TGCCGATCTGGATGCAGCCGTTGAAGGCGCCATGATTTCCAAATACCGCAACGCCGGTCAAACCTGTGTCTGTGCCAACC
GCCTGTATGTGCAGGACGGTGTGTATGATGCCTTTGCCCAGAAGCTCGCTGCTGCCGTGGCCAAACTTAAGGTGGGCAAT
GGCGCCGAACCCGGCGTGACCACAGGCCCGCTTATCAACGCAGCGGCACTTGAGAAGGTACAAAGCCACCTGCAGGACGC
ACTGGATAAGGGCGCAACCCTGGTTGCCGGCGGTAAACCGCTGGGTGGCAACTTTATGGAGCCCGCCATTGTGACCAACG
TGGATGCCAGCATGAAGGTGGCCCGCGAGGAAACCTTCGGCCCTCTGGCGCCGCTGTTCCGTTTCAGCGATGTGGACGAT
GTGATTCGTCAGGCCAACGATACCGAGTTTGGACTGGCAGCCTACTTCTATGGCCGCGACATCTCCCTTATCTGGAAGGT
GGCCGAGGCGCTGGAATACGGCATGGTGGGCGTGAATACCGGGCTTATTTCCACCGAAGTGGCCCCCTTTGGCGGCATGA
AATCATCGGGTCTGGGCCGTGAAGGCTCCAAGTATGGCATCGATGAGTATGTAGAAATCAAATATATCTGTCTGTCGGTG
TGA

Upstream 100 bases:

>100_bases
ATCGGTGCCTGGTATTACACCATGCGTGACAAGCTTGGCATTTAACAGAATTTTCGGCGTAAGTGCCCAGTAACAGGTAT
CAAGTAACAAGGAGTCAGCT

Downstream 100 bases:

>100_bases
CCGGCCAAACAGGAGTACCCTATGAGCTTGACCAATGATTCATTGATGGTTCGTCGCCGCGCTGCTGTGGCCGGTGGCGT
TGGCCAAATCCACCCTGTGT

Product: succinate-semialdehyde dehydrogenase (NAD(P)(+))

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MQLKRPSLLKTKCYINGEWRDALSGETVTIANPATNEAIASVPVMGRDETREAIAAAEAALPAWRALTAKERGAKLRRWY
ELMLENADDLALMMTTEQGKPLAEAKGEVVYAASFIEWFAEEAKRLYGDTIPGHQGDKRIMVIKQGVGVTAAITPWNFPA
AMITRKAGPALAAGCTMIVKPAPQTPFTALALAELAAEAGIPPGVFSVVTGDAVAIGNELCENPVVRKLSFTGSTGVGIK
LMQQCAPTLKKVSLELGGNAPFIVFNDADLDAAVEGAMISKYRNAGQTCVCANRLYVQDGVYDAFAQKLAAAVAKLKVGN
GAEPGVTTGPLINAAALEKVQSHLQDALDKGATLVAGGKPLGGNFMEPAIVTNVDASMKVAREETFGPLAPLFRFSDVDD
VIRQANDTEFGLAAYFYGRDISLIWKVAEALEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKYGIDEYVEIKYICLSV

Sequences:

>Translated_480_residues
MQLKRPSLLKTKCYINGEWRDALSGETVTIANPATNEAIASVPVMGRDETREAIAAAEAALPAWRALTAKERGAKLRRWY
ELMLENADDLALMMTTEQGKPLAEAKGEVVYAASFIEWFAEEAKRLYGDTIPGHQGDKRIMVIKQGVGVTAAITPWNFPA
AMITRKAGPALAAGCTMIVKPAPQTPFTALALAELAAEAGIPPGVFSVVTGDAVAIGNELCENPVVRKLSFTGSTGVGIK
LMQQCAPTLKKVSLELGGNAPFIVFNDADLDAAVEGAMISKYRNAGQTCVCANRLYVQDGVYDAFAQKLAAAVAKLKVGN
GAEPGVTTGPLINAAALEKVQSHLQDALDKGATLVAGGKPLGGNFMEPAIVTNVDASMKVAREETFGPLAPLFRFSDVDD
VIRQANDTEFGLAAYFYGRDISLIWKVAEALEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKYGIDEYVEIKYICLSV
>Mature_480_residues
MQLKRPSLLKTKCYINGEWRDALSGETVTIANPATNEAIASVPVMGRDETREAIAAAEAALPAWRALTAKERGAKLRRWY
ELMLENADDLALMMTTEQGKPLAEAKGEVVYAASFIEWFAEEAKRLYGDTIPGHQGDKRIMVIKQGVGVTAAITPWNFPA
AMITRKAGPALAAGCTMIVKPAPQTPFTALALAELAAEAGIPPGVFSVVTGDAVAIGNELCENPVVRKLSFTGSTGVGIK
LMQQCAPTLKKVSLELGGNAPFIVFNDADLDAAVEGAMISKYRNAGQTCVCANRLYVQDGVYDAFAQKLAAAVAKLKVGN
GAEPGVTTGPLINAAALEKVQSHLQDALDKGATLVAGGKPLGGNFMEPAIVTNVDASMKVAREETFGPLAPLFRFSDVDD
VIRQANDTEFGLAAYFYGRDISLIWKVAEALEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKYGIDEYVEIKYICLSV

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=477, Percent_Identity=54.9266247379455, Blast_Score=511, Evalue=1e-145,
Organism=Homo sapiens, GI25777721, Length=490, Percent_Identity=53.265306122449, Blast_Score=501, Evalue=1e-142,
Organism=Homo sapiens, GI21361176, Length=478, Percent_Identity=38.2845188284519, Blast_Score=324, Evalue=1e-88,
Organism=Homo sapiens, GI238814322, Length=478, Percent_Identity=37.8661087866109, Blast_Score=320, Evalue=3e-87,
Organism=Homo sapiens, GI25777730, Length=483, Percent_Identity=37.888198757764, Blast_Score=317, Evalue=2e-86,
Organism=Homo sapiens, GI21614513, Length=486, Percent_Identity=38.0658436213992, Blast_Score=311, Evalue=8e-85,
Organism=Homo sapiens, GI25777724, Length=478, Percent_Identity=36.8200836820084, Blast_Score=311, Evalue=1e-84,
Organism=Homo sapiens, GI153266822, Length=480, Percent_Identity=37.2916666666667, Blast_Score=310, Evalue=2e-84,
Organism=Homo sapiens, GI12007648, Length=480, Percent_Identity=35, Blast_Score=298, Evalue=8e-81,
Organism=Homo sapiens, GI115387104, Length=459, Percent_Identity=35.9477124183007, Blast_Score=296, Evalue=2e-80,
Organism=Homo sapiens, GI25777732, Length=485, Percent_Identity=35.2577319587629, Blast_Score=296, Evalue=4e-80,
Organism=Homo sapiens, GI25777728, Length=419, Percent_Identity=37.2315035799523, Blast_Score=275, Evalue=5e-74,
Organism=Homo sapiens, GI25777726, Length=478, Percent_Identity=33.6820083682008, Blast_Score=270, Evalue=2e-72,
Organism=Homo sapiens, GI25952152, Length=471, Percent_Identity=30.9978768577495, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI11095441, Length=474, Percent_Identity=29.3248945147679, Blast_Score=214, Evalue=2e-55,
Organism=Homo sapiens, GI188035924, Length=465, Percent_Identity=30.3225806451613, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI310128093, Length=463, Percent_Identity=30.6695464362851, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI310128103, Length=465, Percent_Identity=30.3225806451613, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI301500698, Length=279, Percent_Identity=37.9928315412186, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI310128091, Length=463, Percent_Identity=29.5896328293737, Blast_Score=188, Evalue=9e-48,
Organism=Homo sapiens, GI310128089, Length=329, Percent_Identity=31.306990881459, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI310128097, Length=256, Percent_Identity=33.59375, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI310128087, Length=463, Percent_Identity=26.9978401727862, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI223972651, Length=473, Percent_Identity=26.6384778012685, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI310128095, Length=308, Percent_Identity=30.1948051948052, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI206597441, Length=427, Percent_Identity=26.9320843091335, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI206597439, Length=427, Percent_Identity=26.9320843091335, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI22907049, Length=427, Percent_Identity=26.9320843091335, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI73466520, Length=329, Percent_Identity=28.8753799392097, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI4557303, Length=329, Percent_Identity=28.8753799392097, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI73695881, Length=341, Percent_Identity=27.8592375366569, Blast_Score=125, Evalue=7e-29,
Organism=Homo sapiens, GI73695879, Length=341, Percent_Identity=27.8592375366569, Blast_Score=125, Evalue=7e-29,
Organism=Homo sapiens, GI238859541, Length=433, Percent_Identity=27.2517321016166, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI25777736, Length=433, Percent_Identity=27.2517321016166, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI25777734, Length=433, Percent_Identity=27.2517321016166, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI4502043, Length=426, Percent_Identity=25.8215962441315, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI238814371, Length=426, Percent_Identity=25.8215962441315, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI71773324, Length=358, Percent_Identity=26.8156424581006, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI223972653, Length=473, Percent_Identity=24.3128964059197, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI310128099, Length=234, Percent_Identity=29.0598290598291, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI310128101, Length=234, Percent_Identity=29.0598290598291, Blast_Score=83, Evalue=4e-16,
Organism=Escherichia coli, GI1789015, Length=482, Percent_Identity=70.1244813278008, Blast_Score=710, Evalue=0.0,
Organism=Escherichia coli, GI1787684, Length=474, Percent_Identity=37.3417721518987, Blast_Score=330, Evalue=1e-91,
Organism=Escherichia coli, GI87081896, Length=481, Percent_Identity=37.4220374220374, Blast_Score=297, Evalue=8e-82,
Organism=Escherichia coli, GI1786504, Length=477, Percent_Identity=35.8490566037736, Blast_Score=285, Evalue=3e-78,
Organism=Escherichia coli, GI1787558, Length=479, Percent_Identity=33.4029227557411, Blast_Score=268, Evalue=5e-73,
Organism=Escherichia coli, GI1787715, Length=476, Percent_Identity=34.6638655462185, Blast_Score=267, Evalue=1e-72,
Organism=Escherichia coli, GI87081926, Length=447, Percent_Identity=33.3333333333333, Blast_Score=257, Evalue=1e-69,
Organism=Escherichia coli, GI87082295, Length=487, Percent_Identity=30.8008213552361, Blast_Score=229, Evalue=3e-61,
Organism=Escherichia coli, GI1788042, Length=469, Percent_Identity=32.6226012793177, Blast_Score=190, Evalue=1e-49,
Organism=Escherichia coli, GI1787250, Length=455, Percent_Identity=28.3516483516484, Blast_Score=161, Evalue=1e-40,
Organism=Escherichia coli, GI1787653, Length=414, Percent_Identity=26.0869565217391, Blast_Score=85, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17534119, Length=478, Percent_Identity=46.8619246861925, Blast_Score=420, Evalue=1e-118,
Organism=Caenorhabditis elegans, GI133930964, Length=489, Percent_Identity=38.0368098159509, Blast_Score=322, Evalue=3e-88,
Organism=Caenorhabditis elegans, GI17562198, Length=476, Percent_Identity=37.1848739495798, Blast_Score=297, Evalue=8e-81,
Organism=Caenorhabditis elegans, GI25144435, Length=477, Percent_Identity=36.2683438155136, Blast_Score=288, Evalue=4e-78,
Organism=Caenorhabditis elegans, GI25143876, Length=470, Percent_Identity=34.0425531914894, Blast_Score=271, Evalue=7e-73,
Organism=Caenorhabditis elegans, GI25143874, Length=470, Percent_Identity=34.0425531914894, Blast_Score=270, Evalue=1e-72,
Organism=Caenorhabditis elegans, GI32564736, Length=418, Percent_Identity=36.8421052631579, Blast_Score=262, Evalue=2e-70,
Organism=Caenorhabditis elegans, GI71995606, Length=493, Percent_Identity=33.6713995943205, Blast_Score=255, Evalue=3e-68,
Organism=Caenorhabditis elegans, GI17551164, Length=478, Percent_Identity=31.7991631799163, Blast_Score=232, Evalue=3e-61,
Organism=Caenorhabditis elegans, GI71995613, Length=426, Percent_Identity=33.5680751173709, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI115534176, Length=468, Percent_Identity=30.7692307692308, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI71986308, Length=474, Percent_Identity=28.6919831223629, Blast_Score=194, Evalue=7e-50,
Organism=Caenorhabditis elegans, GI25146391, Length=338, Percent_Identity=28.9940828402367, Blast_Score=134, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI32566756, Length=338, Percent_Identity=28.9940828402367, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI25146394, Length=338, Percent_Identity=28.9940828402367, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17534447, Length=451, Percent_Identity=27.9379157427938, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17564084, Length=343, Percent_Identity=26.8221574344023, Blast_Score=128, Evalue=7e-30,
Organism=Caenorhabditis elegans, GI115532534, Length=350, Percent_Identity=28.2857142857143, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI32564151, Length=403, Percent_Identity=27.7915632754342, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI71990744, Length=290, Percent_Identity=27.5862068965517, Blast_Score=83, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6319478, Length=481, Percent_Identity=51.5592515592516, Blast_Score=490, Evalue=1e-139,
Organism=Saccharomyces cerevisiae, GI6320917, Length=473, Percent_Identity=36.1522198731501, Blast_Score=304, Evalue=2e-83,
Organism=Saccharomyces cerevisiae, GI6324950, Length=469, Percent_Identity=34.9680170575693, Blast_Score=300, Evalue=5e-82,
Organism=Saccharomyces cerevisiae, GI6323821, Length=496, Percent_Identity=33.8709677419355, Blast_Score=273, Evalue=3e-74,
Organism=Saccharomyces cerevisiae, GI6323822, Length=496, Percent_Identity=33.8709677419355, Blast_Score=271, Evalue=2e-73,
Organism=Saccharomyces cerevisiae, GI6325196, Length=472, Percent_Identity=32.4152542372881, Blast_Score=256, Evalue=4e-69,
Organism=Saccharomyces cerevisiae, GI6321828, Length=480, Percent_Identity=25.4166666666667, Blast_Score=151, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6323757, Length=329, Percent_Identity=25.2279635258359, Blast_Score=95, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6321826, Length=499, Percent_Identity=24.6492985971944, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI281362580, Length=479, Percent_Identity=50.9394572025052, Blast_Score=495, Evalue=1e-140,
Organism=Drosophila melanogaster, GI62472918, Length=479, Percent_Identity=50.9394572025052, Blast_Score=495, Evalue=1e-140,
Organism=Drosophila melanogaster, GI62472926, Length=479, Percent_Identity=50.9394572025052, Blast_Score=495, Evalue=1e-140,
Organism=Drosophila melanogaster, GI62472936, Length=479, Percent_Identity=50.9394572025052, Blast_Score=495, Evalue=1e-140,
Organism=Drosophila melanogaster, GI21356737, Length=479, Percent_Identity=50.9394572025052, Blast_Score=495, Evalue=1e-140,
Organism=Drosophila melanogaster, GI24650465, Length=476, Percent_Identity=40.7563025210084, Blast_Score=338, Evalue=6e-93,
Organism=Drosophila melanogaster, GI20129399, Length=484, Percent_Identity=39.4628099173554, Blast_Score=322, Evalue=5e-88,
Organism=Drosophila melanogaster, GI24585660, Length=488, Percent_Identity=35.655737704918, Blast_Score=307, Evalue=1e-83,
Organism=Drosophila melanogaster, GI24638876, Length=476, Percent_Identity=28.3613445378151, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24638878, Length=476, Percent_Identity=28.3613445378151, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24666674, Length=471, Percent_Identity=28.4501061571125, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI45552499, Length=337, Percent_Identity=26.1127596439169, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI281360303, Length=341, Percent_Identity=26.3929618768328, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI281360299, Length=337, Percent_Identity=26.1127596439169, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI281360297, Length=337, Percent_Identity=26.1127596439169, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI281360295, Length=337, Percent_Identity=26.1127596439169, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24586250, Length=337, Percent_Identity=26.1127596439169, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI281360301, Length=341, Percent_Identity=26.3929618768328, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24668425, Length=454, Percent_Identity=24.4493392070485, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24668417, Length=454, Percent_Identity=24.4493392070485, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24668413, Length=454, Percent_Identity=24.4493392070485, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI28571798, Length=380, Percent_Identity=23.6842105263158, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28571796, Length=380, Percent_Identity=23.6842105263158, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28571794, Length=380, Percent_Identity=23.6842105263158, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28571802, Length=380, Percent_Identity=23.6842105263158, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28571800, Length=380, Percent_Identity=23.6842105263158, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28571806, Length=380, Percent_Identity=23.6842105263158, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28574525, Length=452, Percent_Identity=20.5752212389381, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 50920; Mature: 50920

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLKRPSLLKTKCYINGEWRDALSGETVTIANPATNEAIASVPVMGRDETREAIAAAEAA
CCCCCCCCEEEEEEECCCHHHCCCCCEEEEECCCCCCHHHCCCCCCCCHHHHHHHHHHHH
LPAWRALTAKERGAKLRRWYELMLENADDLALMMTTEQGKPLAEAKGEVVYAASFIEWFA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHCCCCEEEHHHHHHHHH
EEAKRLYGDTIPGHQGDKRIMVIKQGVGVTAAITPWNFPAAMITRKAGPALAAGCTMIVK
HHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHCCCCCCCHHHCCEEEEE
PAPQTPFTALALAELAAEAGIPPGVFSVVTGDAVAIGNELCENPVVRKLSFTGSTGVGIK
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHCHHHHCCCHHEEEECCCCCCHHHH
LMQQCAPTLKKVSLELGGNAPFIVFNDADLDAAVEGAMISKYRNAGQTCVCANRLYVQDG
HHHHHHHHHHHEEHEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECEEEEECC
VYDAFAQKLAAAVAKLKVGNGAEPGVTTGPLINAAALEKVQSHLQDALDKGATLVAGGKP
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCC
LGGNFMEPAIVTNVDASMKVAREETFGPLAPLFRFSDVDDVIRQANDTEFGLAAYFYGRD
CCCCCCCCCEEECCCHHHHHHHHHCCCCHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCC
ISLIWKVAEALEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKYGIDEYVEIKYICLSV
HHHHHHHHHHHHHCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MQLKRPSLLKTKCYINGEWRDALSGETVTIANPATNEAIASVPVMGRDETREAIAAAEAA
CCCCCCCCEEEEEEECCCHHHCCCCCEEEEECCCCCCHHHCCCCCCCCHHHHHHHHHHHH
LPAWRALTAKERGAKLRRWYELMLENADDLALMMTTEQGKPLAEAKGEVVYAASFIEWFA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHCCCCEEEHHHHHHHHH
EEAKRLYGDTIPGHQGDKRIMVIKQGVGVTAAITPWNFPAAMITRKAGPALAAGCTMIVK
HHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHCCCCCCCHHHCCEEEEE
PAPQTPFTALALAELAAEAGIPPGVFSVVTGDAVAIGNELCENPVVRKLSFTGSTGVGIK
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHCHHHHCCCHHEEEECCCCCCHHHH
LMQQCAPTLKKVSLELGGNAPFIVFNDADLDAAVEGAMISKYRNAGQTCVCANRLYVQDG
HHHHHHHHHHHEEHEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECEEEEECC
VYDAFAQKLAAAVAKLKVGNGAEPGVTTGPLINAAALEKVQSHLQDALDKGATLVAGGKP
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCC
LGGNFMEPAIVTNVDASMKVAREETFGPLAPLFRFSDVDDVIRQANDTEFGLAAYFYGRD
CCCCCCCCCEEECCCHHHHHHHHHCCCCHHHHHHCCCHHHHHHCCCCCCCCEEEEEECCC
ISLIWKVAEALEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKYGIDEYVEIKYICLSV
HHHHHHHHHHHHHCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]