| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is tesA [H]
Identifier: 119775762
GI number: 119775762
Start: 3149625
End: 3150221
Strand: Reverse
Name: tesA [H]
Synonym: Sama_2630
Alternate gene names: 119775762
Gene position: 3150221-3149625 (Counterclockwise)
Preceding gene: 119775763
Following gene: 119775761
Centisome position: 73.16
GC content: 49.75
Gene sequence:
>597_bases GTGCGTATTCTGTCAGTGTTTTTTATCCTGCTGTTTTTATCGGCCTGCGGCGGGCCGAGATTGCCTTTTCTGGGTGAAAA TGCCCGCATTTTGGCCTTCGGTGACAGTTTAACTTTTGGTATTGGTGCCAGTGACGGCATGGACTATCCAGCCCACCTTT CCCGTCTGTGCGACTGTGACGTGATTAACGCCGGGGTATCGGGGGAAACAACCACCGAAGGTCTGGCTCGACTGGCTGAA TTGCTTGATGAAACCCAACCGGATCTGCTTATCTTGCTGGAAGGTGGCAATGATATCCTCAGAAATCAGGATAAAGCACA GCTTAAGCGCAATTTGGAAGCTATGATTAGGGAAGCTCAGGGAAGGCAGGTGCCTGTGCTTTTGATTGCTGTACCAGACC GAAAGGTGTTTTTATCCCCTTTACCCTTGTATCAGGAACTGGCTGAGCAATTTTCCCTGCCACTGCTTGAGGATACGCTA CCGCAGCTCCTGTCACAAAGCGCCATGAAATCGGACACAGTTCATTTAAATGACGCCGGATATCAGCTTTTGGCGGAAGA AATTTACCAGCTTGCGAGCGAGAGTGGAGCCTTTTAA
Upstream 100 bases:
>100_bases CTGGGACTGAAATACTGATAAGCCACTGAAATTGAAAAGCCGGACTTGTGTCCGGCTTTTTTTTGGGCGATAACAGACGC ATTAGTCCGGGGAGTAAAAA
Downstream 100 bases:
>100_bases GGCCGCTTTCTGAAAATTGCTGAAACGGACGGAAATCAGCTTGACCATGGGCAGGATTTTATGGGTAAATTCCCCGGTAA TAGCAGCCAGGGCGGGTTTA
Product: lipolytic enzyme, G-D-S-L
Products: NA
Alternate protein names: Lecithinase B; Lysophospholipase L1; Protease I [H]
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MRILSVFFILLFLSACGGPRLPFLGENARILAFGDSLTFGIGASDGMDYPAHLSRLCDCDVINAGVSGETTTEGLARLAE LLDETQPDLLILLEGGNDILRNQDKAQLKRNLEAMIREAQGRQVPVLLIAVPDRKVFLSPLPLYQELAEQFSLPLLEDTL PQLLSQSAMKSDTVHLNDAGYQLLAEEIYQLASESGAF
Sequences:
>Translated_198_residues MRILSVFFILLFLSACGGPRLPFLGENARILAFGDSLTFGIGASDGMDYPAHLSRLCDCDVINAGVSGETTTEGLARLAE LLDETQPDLLILLEGGNDILRNQDKAQLKRNLEAMIREAQGRQVPVLLIAVPDRKVFLSPLPLYQELAEQFSLPLLEDTL PQLLSQSAMKSDTVHLNDAGYQLLAEEIYQLASESGAF >Mature_198_residues MRILSVFFILLFLSACGGPRLPFLGENARILAFGDSLTFGIGASDGMDYPAHLSRLCDCDVINAGVSGETTTEGLARLAE LLDETQPDLLILLEGGNDILRNQDKAQLKRNLEAMIREAQGRQVPVLLIAVPDRKVFLSPLPLYQELAEQFSLPLLEDTL PQLLSQSAMKSDTVHLNDAGYQLLAEEIYQLASESGAF
Specific function: Hydrolyzes only long chain acyl thioesters (C12-C18). Specificity similar to chymotrypsin [H]
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDSL' lipolytic enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1786702, Length=167, Percent_Identity=29.3413173652695, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR001087 - InterPro: IPR008265 [H]
Pfam domain/function: PF00657 Lipase_GDSL [H]
EC number: =3.1.1.5 [H]
Molecular weight: Translated: 21634; Mature: 21634
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILSVFFILLFLSACGGPRLPFLGENARILAFGDSLTFGIGASDGMDYPAHLSRLCDCD CHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHCCCH VINAGVSGETTTEGLARLAELLDETQPDLLILLEGGNDILRNQDKAQLKRNLEAMIREAQ HCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHCCHHHHHHHHHHHHHHHHC GRQVPVLLIAVPDRKVFLSPLPLYQELAEQFSLPLLEDTLPQLLSQSAMKSDTVHLNDAG CCCCCEEEEECCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCHH YQLLAEEIYQLASESGAF HHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRILSVFFILLFLSACGGPRLPFLGENARILAFGDSLTFGIGASDGMDYPAHLSRLCDCD CHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHCCCH VINAGVSGETTTEGLARLAELLDETQPDLLILLEGGNDILRNQDKAQLKRNLEAMIREAQ HCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHCCHHHHHHHHHHHHHHHHC GRQVPVLLIAVPDRKVFLSPLPLYQELAEQFSLPLLEDTLPQLLSQSAMKSDTVHLNDAG CCCCCEEEEECCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCHH YQLLAEEIYQLASESGAF HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]