Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775761

Identifier: 119775761

GI number: 119775761

Start: 3148738

End: 3149466

Strand: Reverse

Name: 119775761

Synonym: Sama_2629

Alternate gene names: NA

Gene position: 3149466-3148738 (Counterclockwise)

Preceding gene: 119775762

Following gene: 119775759

Centisome position: 73.14

GC content: 52.95

Gene sequence:

>729_bases
ATGACTGAGCTTGAGCATCAGGTTTTTTCTCAAATCAGGGCGATCATCGCCAATGAAGAGCAGGTATTAGGCCGCAGGGG
AATTCTCATTCCACTGAAGAAGGCCATCCTTGCCGATGGTGATGTGCGTAATGTGGTGGATATTGTCTCCAGCGATCCGG
CACTGGCGGCACACTTATTGTGGCGAAGCACCACCGCGCACGTGGGTGGCGCCCATAACAGTAAAAACCGCAGCCTGAAG
GATGCGCTTATCCGTTTGGGGCAAGTGAACATCTACCGCTACGCCTTCAGCTTTTATTTGAAAGAACGCCTCGATGAGCT
GCCGCAGCCCTATAAAAAGCTGGTATTGGGTTATTGGCGCCTGACAGAAAGCATTGCCGCATCGGCGGTGGATAGCCTTA
AAGATCTGGTGAGCAACAACATTGACCCGGACGAGGTTCAGACTCTGGCGCTCTTCAGTGTGTTTGGGCAGATGATCGCA
CTGACGGCCTTTGCGTATCTCAATGCCGAATCGGATGAGTCATTCCCCCTGGGCATCATCAAGCAAATCATAGATACCCA
ACAGCAAACTCTGACGCTGGAAGCCTTTGATTCACTCGGCCTCGACGAAGAGCTCAAAGAAGAGTTTATGATTGCTCACA
ACCTGCGCCAGACCCGCAACCCCAACTCGGCAGGTCTCGTGCTGCGCCGGGTGTTATCGATGCGCGGCTTGCTGCTCAAT
CCACTGTAA

Upstream 100 bases:

>100_bases
TTATGGGTAAATTCCCCGGTAATAGCAGCCAGGGCGGGTTTATTGCTAAGGCCAAACTTGAGTCCCTTTTTGATTGCCCG
GACAAAAATAGGTTAGTTTC

Downstream 100 bases:

>100_bases
TTTACTGAGTTGGATATAAAAAACGCCTGCAGTTGCAGGCGTTTTTTATATGGGCGATTGTTGAGTCATGCCGTGTATAA
GACGAGCTTACTGTGATTGG

Product: putative signal transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTELEHQVFSQIRAIIANEEQVLGRRGILIPLKKAILADGDVRNVVDIVSSDPALAAHLLWRSTTAHVGGAHNSKNRSLK
DALIRLGQVNIYRYAFSFYLKERLDELPQPYKKLVLGYWRLTESIAASAVDSLKDLVSNNIDPDEVQTLALFSVFGQMIA
LTAFAYLNAESDESFPLGIIKQIIDTQQQTLTLEAFDSLGLDEELKEEFMIAHNLRQTRNPNSAGLVLRRVLSMRGLLLN
PL

Sequences:

>Translated_242_residues
MTELEHQVFSQIRAIIANEEQVLGRRGILIPLKKAILADGDVRNVVDIVSSDPALAAHLLWRSTTAHVGGAHNSKNRSLK
DALIRLGQVNIYRYAFSFYLKERLDELPQPYKKLVLGYWRLTESIAASAVDSLKDLVSNNIDPDEVQTLALFSVFGQMIA
LTAFAYLNAESDESFPLGIIKQIIDTQQQTLTLEAFDSLGLDEELKEEFMIAHNLRQTRNPNSAGLVLRRVLSMRGLLLN
PL
>Mature_241_residues
TELEHQVFSQIRAIIANEEQVLGRRGILIPLKKAILADGDVRNVVDIVSSDPALAAHLLWRSTTAHVGGAHNSKNRSLKD
ALIRLGQVNIYRYAFSFYLKERLDELPQPYKKLVLGYWRLTESIAASAVDSLKDLVSNNIDPDEVQTLALFSVFGQMIAL
TAFAYLNAESDESFPLGIIKQIIDTQQQTLTLEAFDSLGLDEELKEEFMIAHNLRQTRNPNSAGLVLRRVLSMRGLLLNP
L

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27099; Mature: 26967

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CC
>Mature Secondary Structure 
TELEHQVFSQIRAIIANEEQVLGRRGILIPLKKAILADGDVRNVVDIVSSDPALAAHLL
CCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHH
WRSTTAHVGGAHNSKNRSLKDALIRLGQVNIYRYAFSFYLKERLDELPQPYKKLVLGYWR
HHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LTESIAASAVDSLKDLVSNNIDPDEVQTLALFSVFGQMIALTAFAYLNAESDESFPLGII
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
KQIIDTQQQTLTLEAFDSLGLDEELKEEFMIAHNLRQTRNPNSAGLVLRRVLSMRGLLLN
HHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
PL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA