Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is nadD

Identifier: 119775717

GI number: 119775717

Start: 3093820

End: 3094470

Strand: Direct

Name: nadD

Synonym: Sama_2585

Alternate gene names: 119775717

Gene position: 3093820-3094470 (Clockwise)

Preceding gene: 119775716

Following gene: 119775718

Centisome position: 71.85

GC content: 56.22

Gene sequence:

>651_bases
ATGACTAAGCAGCCTAATGCAAAGCGGCATACAGCTCTGCTCGGCGGCACCTTTGACCCGCCTCACTTTGGCCATATCAG
GCCACTGCTGGATGTGCTTAAGCACTGGCCATTGCAGGATTGTTGGCTGTTGCCAAATCATATTCCGCCCCACAAACCCG
GCACCCATGCCAGCCCGAAGGCAAGATTGGAAATGATTGACGCGCTGTGCCGGGAGTTCCCGGCATTCAGCCTGTGCGAC
GTCGAGCTTCGCCGCGACGAACCCAGTTACACGGTCAACACTCTCAGGCAGTTGAGGGAACTTTATCCCGACAGGGTGTT
CTACTTTGTCATGGGGATGGATTCTTTTCTGTCGCTGGATAAGTGGTTTGAGTGGCAGCAACTTTTTGAACTCTGCCATC
TGGTGGTGTGTGCCCGGCCCGGTTATCAATTGGCAGCCGACCACGGCATGGCAGAGGTCCTTGCGAACAGACAACACACA
GAAGCCGACTTACCGGCAGAGGACAGCGGTAAAGTGTTGATCGCTGACATCCGTGAGCAAGACATTTCCTCCACCGATAT
CCGCACGGCGTTGGCCGAGCGGCGGGATATTCGCCAGTTAGTGCCAGAGTCAGTGGCCCGGGTGATTGAGACCCAGGGCC
TGTACCGCTAA

Upstream 100 bases:

>100_bases
CTTAAACAGGGCGGAGAAGAGGACTGGACACTGCTGACTCACCTTTGCCTGCTCTTTGATGCCAGTGCCCACAGCGCTCT
GGTGGATACCCGGGGTTGAT

Downstream 100 bases:

>100_bases
GCGGTGTATTCCACCGCGGGCTGCTGCTATACTGTCGCGCTCTTTTTTAGGAAACACATGGGGTAATTTCGCGTGCAAAG
CGAAGAACTGAAGCAATTTG

Product: nicotinate-nucleotide adenylyltransferase

Products: NA

Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MTKQPNAKRHTALLGGTFDPPHFGHIRPLLDVLKHWPLQDCWLLPNHIPPHKPGTHASPKARLEMIDALCREFPAFSLCD
VELRRDEPSYTVNTLRQLRELYPDRVFYFVMGMDSFLSLDKWFEWQQLFELCHLVVCARPGYQLAADHGMAEVLANRQHT
EADLPAEDSGKVLIADIREQDISSTDIRTALAERRDIRQLVPESVARVIETQGLYR

Sequences:

>Translated_216_residues
MTKQPNAKRHTALLGGTFDPPHFGHIRPLLDVLKHWPLQDCWLLPNHIPPHKPGTHASPKARLEMIDALCREFPAFSLCD
VELRRDEPSYTVNTLRQLRELYPDRVFYFVMGMDSFLSLDKWFEWQQLFELCHLVVCARPGYQLAADHGMAEVLANRQHT
EADLPAEDSGKVLIADIREQDISSTDIRTALAERRDIRQLVPESVARVIETQGLYR
>Mature_215_residues
TKQPNAKRHTALLGGTFDPPHFGHIRPLLDVLKHWPLQDCWLLPNHIPPHKPGTHASPKARLEMIDALCREFPAFSLCDV
ELRRDEPSYTVNTLRQLRELYPDRVFYFVMGMDSFLSLDKWFEWQQLFELCHLVVCARPGYQLAADHGMAEVLANRQHTE
ADLPAEDSGKVLIADIREQDISSTDIRTALAERRDIRQLVPESVARVIETQGLYR

Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)

COG id: COG1057

COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nadD family

Homologues:

Organism=Escherichia coli, GI1786858, Length=212, Percent_Identity=36.3207547169811, Blast_Score=142, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NADD_SHEAM (A1S8T1)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_928457.1
- ProteinModelPortal:   A1S8T1
- SMR:   A1S8T1
- STRING:   A1S8T1
- GeneID:   4604832
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_2585
- NMPDR:   fig|326297.7.peg.2423
- eggNOG:   COG1057
- HOGENOM:   HBG739448
- OMA:   LLGWDAF
- PhylomeDB:   A1S8T1
- HAMAP:   MF_00244
- InterPro:   IPR004821
- InterPro:   IPR004820
- InterPro:   IPR005248
- InterPro:   IPR014729
- Gene3D:   G3DSA:3.40.50.620
- PANTHER:   PTHR12039
- TIGRFAMs:   TIGR00125
- TIGRFAMs:   TIGR00482

Pfam domain/function: PF01467 CTP_transf_2

EC number: =2.7.7.18

Molecular weight: Translated: 24876; Mature: 24745

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKQPNAKRHTALLGGTFDPPHFGHIRPLLDVLKHWPLQDCWLLPNHIPPHKPGTHASPK
CCCCCCCHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCCHHEECCCCCCCCCCCCCCCHH
ARLEMIDALCREFPAFSLCDVELRRDEPSYTVNTLRQLRELYPDRVFYFVMGMDSFLSLD
HHHHHHHHHHHHCCCCCEECHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KWFEWQQLFELCHLVVCARPGYQLAADHGMAEVLANRQHTEADLPAEDSGKVLIADIREQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCC
DISSTDIRTALAERRDIRQLVPESVARVIETQGLYR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TKQPNAKRHTALLGGTFDPPHFGHIRPLLDVLKHWPLQDCWLLPNHIPPHKPGTHASPK
CCCCCCHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCCHHEECCCCCCCCCCCCCCCHH
ARLEMIDALCREFPAFSLCDVELRRDEPSYTVNTLRQLRELYPDRVFYFVMGMDSFLSLD
HHHHHHHHHHHHCCCCCEECHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KWFEWQQLFELCHLVVCARPGYQLAADHGMAEVLANRQHTEADLPAEDSGKVLIADIREQ
HHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCC
DISSTDIRTALAERRDIRQLVPESVARVIETQGLYR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA