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The map label for this gene is ychQ [C]

Identifier: 119775696

GI number: 119775696

Start: 3070567

End: 3070965

Strand: Reverse

Name: ychQ [C]

Synonym: Sama_2564

Alternate gene names: 119775696

Gene position: 3070965-3070567 (Counterclockwise)

Preceding gene: 119775697

Following gene: 119775695

Centisome position: 71.32

GC content: 48.62

Gene sequence:

>399_bases
ATGGAATCCATCAACAACCTCTATCCCGTCTTTAAGCACCTGCACCTGACGCTGGTGGCAACCAGTGTGCTCTTCTTTGT
GGTGCGCTTCGTGCTCAAATTAAAAGAATCTGCCCTGCTGCAGAAAAAGGTGATGCGCATTGCACCCCACATCATAGATA
CCTGTCTGTTGCTGTCGGGTCTGCTGATGTGTTTCCTTATCAAACAATATCCCTTCGTTGACCCCTGGTTGACCGAGAAA
ATCCTTGCTGTGGTTGCCTACATTTTGCTGGCCATCATGGCGATGAAGTCCAATCGCAATAAATTTTTCCGCTTTTTTGC
GTTCCTCGGCGCCATCGCCTGGGTTGTGTATGCGGCCAAAATCGCTGTCTTTAAACAGGCCATAATGCTGGCATCATGA

Upstream 100 bases:

>100_bases
TCCGGGCAGCATTGGTAAGGGCTGAAGGATTCGGGTACACTAGCGCCTTTGTTTTTCGGGCATTTAGTTTCAGGACTCTT
TTACAAAAGGCAGCCAGGCT

Downstream 100 bases:

>100_bases
GTGAATTTTCGTTAGTAGACGGTGTTTCCCTGCCGGAGACGCCGCTGGATATACTTGCGCATTTGGGGCTCGCAGACAGG
CAAAAAGCCGAGTGGGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; SirB Family Protein; Protein SirB Invasion Gene Expression Up-Regulator

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MESINNLYPVFKHLHLTLVATSVLFFVVRFVLKLKESALLQKKVMRIAPHIIDTCLLLSGLLMCFLIKQYPFVDPWLTEK
ILAVVAYILLAIMAMKSNRNKFFRFFAFLGAIAWVVYAAKIAVFKQAIMLAS

Sequences:

>Translated_132_residues
MESINNLYPVFKHLHLTLVATSVLFFVVRFVLKLKESALLQKKVMRIAPHIIDTCLLLSGLLMCFLIKQYPFVDPWLTEK
ILAVVAYILLAIMAMKSNRNKFFRFFAFLGAIAWVVYAAKIAVFKQAIMLAS
>Mature_132_residues
MESINNLYPVFKHLHLTLVATSVLFFVVRFVLKLKESALLQKKVMRIAPHIIDTCLLLSGLLMCFLIKQYPFVDPWLTEK
ILAVVAYILLAIMAMKSNRNKFFRFFAFLGAIAWVVYAAKIAVFKQAIMLAS

Specific function: Unknown

COG id: COG3094

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15113; Mature: 15113

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESINNLYPVFKHLHLTLVATSVLFFVVRFVLKLKESALLQKKVMRIAPHIIDTCLLLSG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLMCFLIKQYPFVDPWLTEKILAVVAYILLAIMAMKSNRNKFFRFFAFLGAIAWVVYAAK
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
IAVFKQAIMLAS
HHHHHHHHHHCC
>Mature Secondary Structure
MESINNLYPVFKHLHLTLVATSVLFFVVRFVLKLKESALLQKKVMRIAPHIIDTCLLLSG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLMCFLIKQYPFVDPWLTEKILAVVAYILLAIMAMKSNRNKFFRFFAFLGAIAWVVYAAK
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
IAVFKQAIMLAS
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA