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The map label for this gene is ychA [C]

Identifier: 119775695

GI number: 119775695

Start: 3069782

End: 3070570

Strand: Reverse

Name: ychA [C]

Synonym: Sama_2563

Alternate gene names: 119775695

Gene position: 3070570-3069782 (Counterclockwise)

Preceding gene: 119775696

Following gene: 119775694

Centisome position: 71.31

GC content: 55.64

Gene sequence:

>789_bases
ATGAGTGAATTTTCGTTAGTAGACGGTGTTTCCCTGCCGGAGACGCCGCTGGATATACTTGCGCATTTGGGGCTCGCAGA
CAGGCAAAAAGCCGAGTGGGCCTGGCTTGAAATCGCCGGTGGTGTGCTCAGTCATTATCTGGTGGACAGAGACGCCAGAC
TCAAGGCATTGCTGGGCTGGTTTTACCGGGATCTGGGCTTTCGGGCCAAAGATGACTATTTCAGTCTTGAGGCCGCGAGC
CTGGCACACACACTGATGTTTCGTCAGGGGAACAGCACCACACTGGCAACCGTATTGATGCTGCTCGCCAAGCAACTGGA
TTTGCCACTCGAACCCATTCTGTTGCCCGGCCATACTCTGCTTTGTTTGAGGGACGGGAAGAAAAAACTGTTAATCGACC
CGCTCAGTGGCGAGATCATTGACCGCAAACGGGTGCATGCCCTGGTGCGTGGCGAGTTGGGCAACTGGGCGCCGATGAAG
CCGGTTTATGTGAAACCCTCAGGGGTGAAGGCACTCATCAGCCGAATGTTGGGAGAGCTCAAAGCGGGCGCCATAGTAAA
GCAGCGTTTTGATGTGGCGCTTGCCTGCAGCAATATGCTGCTCGATTGGCACCCCGATGACACCACGCTCATTCGTGAAA
GGGCCTTCATCGCCCAGCAGCTTGGCGCCATTCGGGTGGCCGAAGCCGACCTCAGGCAGTTTATCGATCTGAGTCCCCAC
GACCCTGTGGTGGAGTTGGTGAAAATGCAGCTGCGTGAGCTGGGCGAACATCACGAAATTCTGCATTAA

Upstream 100 bases:

>100_bases
GCAATAAATTTTTCCGCTTTTTTGCGTTCCTCGGCGCCATCGCCTGGGTTGTGTATGCGGCCAAAATCGCTGTCTTTAAA
CAGGCCATAATGCTGGCATC

Downstream 100 bases:

>100_bases
CAAAGATATACCTTACAAAATTAATAACACTTTCAGGGGGAAGAAAGGATGACAACGGCGCCATTGGTTACCAACGACGC
AACCGTACTGGGTTTTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSEFSLVDGVSLPETPLDILAHLGLADRQKAEWAWLEIAGGVLSHYLVDRDARLKALLGWFYRDLGFRAKDDYFSLEAAS
LAHTLMFRQGNSTTLATVLMLLAKQLDLPLEPILLPGHTLLCLRDGKKKLLIDPLSGEIIDRKRVHALVRGELGNWAPMK
PVYVKPSGVKALISRMLGELKAGAIVKQRFDVALACSNMLLDWHPDDTTLIRERAFIAQQLGAIRVAEADLRQFIDLSPH
DPVVELVKMQLRELGEHHEILH

Sequences:

>Translated_262_residues
MSEFSLVDGVSLPETPLDILAHLGLADRQKAEWAWLEIAGGVLSHYLVDRDARLKALLGWFYRDLGFRAKDDYFSLEAAS
LAHTLMFRQGNSTTLATVLMLLAKQLDLPLEPILLPGHTLLCLRDGKKKLLIDPLSGEIIDRKRVHALVRGELGNWAPMK
PVYVKPSGVKALISRMLGELKAGAIVKQRFDVALACSNMLLDWHPDDTTLIRERAFIAQQLGAIRVAEADLRQFIDLSPH
DPVVELVKMQLRELGEHHEILH
>Mature_261_residues
SEFSLVDGVSLPETPLDILAHLGLADRQKAEWAWLEIAGGVLSHYLVDRDARLKALLGWFYRDLGFRAKDDYFSLEAASL
AHTLMFRQGNSTTLATVLMLLAKQLDLPLEPILLPGHTLLCLRDGKKKLLIDPLSGEIIDRKRVHALVRGELGNWAPMKP
VYVKPSGVKALISRMLGELKAGAIVKQRFDVALACSNMLLDWHPDDTTLIRERAFIAQQLGAIRVAEADLRQFIDLSPHD
PVVELVKMQLRELGEHHEILH

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0162 family [H]

Homologues:

Organism=Escherichia coli, GI1787465, Length=214, Percent_Identity=30.3738317757009, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29358; Mature: 29227

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEFSLVDGVSLPETPLDILAHLGLADRQKAEWAWLEIAGGVLSHYLVDRDARLKALLGW
CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
FYRDLGFRAKDDYFSLEAASLAHTLMFRQGNSTTLATVLMLLAKQLDLPLEPILLPGHTL
HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCEE
LCLRDGKKKLLIDPLSGEIIDRKRVHALVRGELGNWAPMKPVYVKPSGVKALISRMLGEL
EEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHH
KAGAIVKQRFDVALACSNMLLDWHPDDTTLIRERAFIAQQLGAIRVAEADLRQFIDLSPH
HHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCC
DPVVELVKMQLRELGEHHEILH
CHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SEFSLVDGVSLPETPLDILAHLGLADRQKAEWAWLEIAGGVLSHYLVDRDARLKALLGW
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
FYRDLGFRAKDDYFSLEAASLAHTLMFRQGNSTTLATVLMLLAKQLDLPLEPILLPGHTL
HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCEE
LCLRDGKKKLLIDPLSGEIIDRKRVHALVRGELGNWAPMKPVYVKPSGVKALISRMLGEL
EEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHH
KAGAIVKQRFDVALACSNMLLDWHPDDTTLIRERAFIAQQLGAIRVAEADLRQFIDLSPH
HHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCC
DPVVELVKMQLRELGEHHEILH
CHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]