Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is grxB [H]

Identifier: 119775681

GI number: 119775681

Start: 3057983

End: 3058663

Strand: Reverse

Name: grxB [H]

Synonym: Sama_2549

Alternate gene names: 119775681

Gene position: 3058663-3057983 (Counterclockwise)

Preceding gene: 119775682

Following gene: 119775679

Centisome position: 71.03

GC content: 52.72

Gene sequence:

>681_bases
TTGGGGCGTCCAAGTCTGAAAGAGAACCCTATGAAACTCTTTGTATTCGAACATTGTCCCTATTGTGTTCGCGCCATGAT
GATAGTGGGCTATAAGGGCATTGCGCTGGAAAAAGTAATACTGCAAAACGATGATGTGGATAGCCGTATCCGCATGGTCG
GTGCCAATATGGTGCCTATTCTGCAAAAAGACGATGGCAGCTATATGGCCGAGAGCCTGGATATCGTCGCTTTTCTCGAT
GCGCTGTGCGGTGAGGCTCTGCTTGAGCCCGCCAAGCATGAGCAGCACATCGCTGCCTGGCTGGATAAGGCCGGTTATTA
CAGCAGCCGATTATTGCATCCCCGCAACGTGAGAATGGGGCTGCCTGAGTATGGCTCAGAAGCCGCTATCCGCTGGTATA
CCGAGAAGAAAACGGCGGTCATAGGCATGAGCTTCGAGGAGGCCTTCGCCGCATCGGGGGAGTACATAGCTGCGCTGGAG
CCACTGTTTACCGAACTGGATTTGATACCGCTGCCGAGTGAGCGCAATAATCAGTTGGGGTATGACGATGTATTGCTGTT
CCCTGTGCTGAGAAACCTCACTGCGGTGAAAGGGCTTAACGTTGGAAAGCGAGTCCGCAGCTATATAGATGAAGTGGCCG
CGCTCACCAAGGTCGCGCTGTTTGATACGACAGCCATATAG

Upstream 100 bases:

>100_bases
GGGCTGAGTCTCGCCGAGCGCTGGCGTCAGCTTTTTGCACCACCCTCCAGCGCCAACGATAAGGATTGAGGCTTCGCAAG
CTCCATGGCTTGGAGTAAGC

Downstream 100 bases:

>100_bases
CGCCAATATCCTCCCGGCCTTTTTGCCAAGGCTATCCGATAACGAAAACGCCCCATAACAGGGGCGTTTTTTCGATGTCA
CTACACATTGTTATCAGCGC

Product: glutaredoxin 2

Products: NA

Alternate protein names: Grx2 [H]

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MGRPSLKENPMKLFVFEHCPYCVRAMMIVGYKGIALEKVILQNDDVDSRIRMVGANMVPILQKDDGSYMAESLDIVAFLD
ALCGEALLEPAKHEQHIAAWLDKAGYYSSRLLHPRNVRMGLPEYGSEAAIRWYTEKKTAVIGMSFEEAFAASGEYIAALE
PLFTELDLIPLPSERNNQLGYDDVLLFPVLRNLTAVKGLNVGKRVRSYIDEVAALTKVALFDTTAI

Sequences:

>Translated_226_residues
MGRPSLKENPMKLFVFEHCPYCVRAMMIVGYKGIALEKVILQNDDVDSRIRMVGANMVPILQKDDGSYMAESLDIVAFLD
ALCGEALLEPAKHEQHIAAWLDKAGYYSSRLLHPRNVRMGLPEYGSEAAIRWYTEKKTAVIGMSFEEAFAASGEYIAALE
PLFTELDLIPLPSERNNQLGYDDVLLFPVLRNLTAVKGLNVGKRVRSYIDEVAALTKVALFDTTAI
>Mature_225_residues
GRPSLKENPMKLFVFEHCPYCVRAMMIVGYKGIALEKVILQNDDVDSRIRMVGANMVPILQKDDGSYMAESLDIVAFLDA
LCGEALLEPAKHEQHIAAWLDKAGYYSSRLLHPRNVRMGLPEYGSEAAIRWYTEKKTAVIGMSFEEAFAASGEYIAALEP
LFTELDLIPLPSERNNQLGYDDVLLFPVLRNLTAVKGLNVGKRVRSYIDEVAALTKVALFDTTAI

Specific function: Involved in reducing some disulfides in a coupled system with glutathione reductase. Does not act as hydrogen donor for ribonucleotide reductase [H]

COG id: COG2999

COG function: function code O; Glutaredoxin 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1787303, Length=217, Percent_Identity=42.8571428571429, Blast_Score=170, Evalue=9e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011767
- InterPro:   IPR007494
- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR011901
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF04399 Glutaredoxin2_C [H]

EC number: NA

Molecular weight: Translated: 25218; Mature: 25086

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS00195 GLUTAREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRPSLKENPMKLFVFEHCPYCVRAMMIVGYKGIALEKVILQNDDVDSRIRMVGANMVPI
CCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCEE
LQKDDGSYMAESLDIVAFLDALCGEALLEPAKHEQHIAAWLDKAGYYSSRLLHPRNVRMG
EEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC
LPEYGSEAAIRWYTEKKTAVIGMSFEEAFAASGEYIAALEPLFTELDLIPLPSERNNQLG
CCCCCCCCEEEEEECCCEEEEECCHHHHHHCCCCCHHHHHHHHHHCCCEECCCCCCCCCC
YDDVLLFPVLRNLTAVKGLNVGKRVRSYIDEVAALTKVALFDTTAI
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GRPSLKENPMKLFVFEHCPYCVRAMMIVGYKGIALEKVILQNDDVDSRIRMVGANMVPI
CCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCEE
LQKDDGSYMAESLDIVAFLDALCGEALLEPAKHEQHIAAWLDKAGYYSSRLLHPRNVRMG
EEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC
LPEYGSEAAIRWYTEKKTAVIGMSFEEAFAASGEYIAALEPLFTELDLIPLPSERNNQLG
CCCCCCCCEEEEEECCCEEEEECCHHHHHHCCCCCHHHHHHHHHHCCCEECCCCCCCCCC
YDDVLLFPVLRNLTAVKGLNVGKRVRSYIDEVAALTKVALFDTTAI
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]