| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is grxB [H]
Identifier: 119775681
GI number: 119775681
Start: 3057983
End: 3058663
Strand: Reverse
Name: grxB [H]
Synonym: Sama_2549
Alternate gene names: 119775681
Gene position: 3058663-3057983 (Counterclockwise)
Preceding gene: 119775682
Following gene: 119775679
Centisome position: 71.03
GC content: 52.72
Gene sequence:
>681_bases TTGGGGCGTCCAAGTCTGAAAGAGAACCCTATGAAACTCTTTGTATTCGAACATTGTCCCTATTGTGTTCGCGCCATGAT GATAGTGGGCTATAAGGGCATTGCGCTGGAAAAAGTAATACTGCAAAACGATGATGTGGATAGCCGTATCCGCATGGTCG GTGCCAATATGGTGCCTATTCTGCAAAAAGACGATGGCAGCTATATGGCCGAGAGCCTGGATATCGTCGCTTTTCTCGAT GCGCTGTGCGGTGAGGCTCTGCTTGAGCCCGCCAAGCATGAGCAGCACATCGCTGCCTGGCTGGATAAGGCCGGTTATTA CAGCAGCCGATTATTGCATCCCCGCAACGTGAGAATGGGGCTGCCTGAGTATGGCTCAGAAGCCGCTATCCGCTGGTATA CCGAGAAGAAAACGGCGGTCATAGGCATGAGCTTCGAGGAGGCCTTCGCCGCATCGGGGGAGTACATAGCTGCGCTGGAG CCACTGTTTACCGAACTGGATTTGATACCGCTGCCGAGTGAGCGCAATAATCAGTTGGGGTATGACGATGTATTGCTGTT CCCTGTGCTGAGAAACCTCACTGCGGTGAAAGGGCTTAACGTTGGAAAGCGAGTCCGCAGCTATATAGATGAAGTGGCCG CGCTCACCAAGGTCGCGCTGTTTGATACGACAGCCATATAG
Upstream 100 bases:
>100_bases GGGCTGAGTCTCGCCGAGCGCTGGCGTCAGCTTTTTGCACCACCCTCCAGCGCCAACGATAAGGATTGAGGCTTCGCAAG CTCCATGGCTTGGAGTAAGC
Downstream 100 bases:
>100_bases CGCCAATATCCTCCCGGCCTTTTTGCCAAGGCTATCCGATAACGAAAACGCCCCATAACAGGGGCGTTTTTTCGATGTCA CTACACATTGTTATCAGCGC
Product: glutaredoxin 2
Products: NA
Alternate protein names: Grx2 [H]
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MGRPSLKENPMKLFVFEHCPYCVRAMMIVGYKGIALEKVILQNDDVDSRIRMVGANMVPILQKDDGSYMAESLDIVAFLD ALCGEALLEPAKHEQHIAAWLDKAGYYSSRLLHPRNVRMGLPEYGSEAAIRWYTEKKTAVIGMSFEEAFAASGEYIAALE PLFTELDLIPLPSERNNQLGYDDVLLFPVLRNLTAVKGLNVGKRVRSYIDEVAALTKVALFDTTAI
Sequences:
>Translated_226_residues MGRPSLKENPMKLFVFEHCPYCVRAMMIVGYKGIALEKVILQNDDVDSRIRMVGANMVPILQKDDGSYMAESLDIVAFLD ALCGEALLEPAKHEQHIAAWLDKAGYYSSRLLHPRNVRMGLPEYGSEAAIRWYTEKKTAVIGMSFEEAFAASGEYIAALE PLFTELDLIPLPSERNNQLGYDDVLLFPVLRNLTAVKGLNVGKRVRSYIDEVAALTKVALFDTTAI >Mature_225_residues GRPSLKENPMKLFVFEHCPYCVRAMMIVGYKGIALEKVILQNDDVDSRIRMVGANMVPILQKDDGSYMAESLDIVAFLDA LCGEALLEPAKHEQHIAAWLDKAGYYSSRLLHPRNVRMGLPEYGSEAAIRWYTEKKTAVIGMSFEEAFAASGEYIAALEP LFTELDLIPLPSERNNQLGYDDVLLFPVLRNLTAVKGLNVGKRVRSYIDEVAALTKVALFDTTAI
Specific function: Involved in reducing some disulfides in a coupled system with glutathione reductase. Does not act as hydrogen donor for ribonucleotide reductase [H]
COG id: COG2999
COG function: function code O; Glutaredoxin 2
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787303, Length=217, Percent_Identity=42.8571428571429, Blast_Score=170, Evalue=9e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011767 - InterPro: IPR007494 - InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR011901 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF04399 Glutaredoxin2_C [H]
EC number: NA
Molecular weight: Translated: 25218; Mature: 25086
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRPSLKENPMKLFVFEHCPYCVRAMMIVGYKGIALEKVILQNDDVDSRIRMVGANMVPI CCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCEE LQKDDGSYMAESLDIVAFLDALCGEALLEPAKHEQHIAAWLDKAGYYSSRLLHPRNVRMG EEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC LPEYGSEAAIRWYTEKKTAVIGMSFEEAFAASGEYIAALEPLFTELDLIPLPSERNNQLG CCCCCCCCEEEEEECCCEEEEECCHHHHHHCCCCCHHHHHHHHHHCCCEECCCCCCCCCC YDDVLLFPVLRNLTAVKGLNVGKRVRSYIDEVAALTKVALFDTTAI CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GRPSLKENPMKLFVFEHCPYCVRAMMIVGYKGIALEKVILQNDDVDSRIRMVGANMVPI CCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCEE LQKDDGSYMAESLDIVAFLDALCGEALLEPAKHEQHIAAWLDKAGYYSSRLLHPRNVRMG EEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC LPEYGSEAAIRWYTEKKTAVIGMSFEEAFAASGEYIAALEPLFTELDLIPLPSERNNQLG CCCCCCCCEEEEEECCCEEEEECCHHHHHHCCCCCHHHHHHHHHHCCCEECCCCCCCCCC YDDVLLFPVLRNLTAVKGLNVGKRVRSYIDEVAALTKVALFDTTAI CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]