Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775602

Identifier: 119775602

GI number: 119775602

Start: 2974744

End: 2975304

Strand: Reverse

Name: 119775602

Synonym: Sama_2469

Alternate gene names: NA

Gene position: 2975304-2974744 (Counterclockwise)

Preceding gene: 119775607

Following gene: 119775601

Centisome position: 69.09

GC content: 50.27

Gene sequence:

>561_bases
ATGAAAAAGATTATAGTTGTGGCCGCCTTGCTGGCTCTCAGTGCCTGTTCCAGTATGAAAACCAGCTGGGACTTCGATCC
CGGAGTGACTTTTAACCAATACAAAACCTATGCCTGGGTAGAAAAGAAGGACGATGACGCGGGTTATCACCTCGATGGCC
TGATGGATCAAAGGGTGCGTGACGCCATCGAGACTGAACTTGCCCAGAAGGGATTCAGTAAGTCAGAGGCGGCCGGTGCC
GATCTCTTGGTGAACTACCTCACCAAGGTTGATAAGAAAATCAATGTTGATACCTTCAACACCAGCTATGGCTATAACCC
GTATTGGGGACCGGGTTGGGGCTGGGGTGGTAACGTGCAGACCCAAACCACGGTGCGCGAGTATGAGGTTGGTACACTTA
TCATTGATCTAATTGATAATAAATCAGGTAAGCTGGTATGGCGTGGCTCAGTGGCCGACACCATACGCGACAGCAATACG
CCACAGGAACGTGAAACCAAGGTGCGTGAAGCCGTGGCCGGTGTGATGCTGAATTATCCACCAAAGTCTGATACCAAGTA
A

Upstream 100 bases:

>100_bases
GTAATTTCAGTTGTTAGTCACAAAAAGCACAGTTAAGCTGAACCAAATTGCCTCTTATCTGTCTGAAAGGGCAGAAGACT
TTGCTTCGGAGAGACCCTTT

Downstream 100 bases:

>100_bases
GGCTAAGAGTAATAAAAAAGCGACCTCGGGTCGCTTTTTTATTGCCTCTTTCTTCTGCATTTTTTATCGCAATCCCCGAA
CCCCAGGCCCCTTATCAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKKIIVVAALLALSACSSMKTSWDFDPGVTFNQYKTYAWVEKKDDDAGYHLDGLMDQRVRDAIETELAQKGFSKSEAAGA
DLLVNYLTKVDKKINVDTFNTSYGYNPYWGPGWGWGGNVQTQTTVREYEVGTLIIDLIDNKSGKLVWRGSVADTIRDSNT
PQERETKVREAVAGVMLNYPPKSDTK

Sequences:

>Translated_186_residues
MKKIIVVAALLALSACSSMKTSWDFDPGVTFNQYKTYAWVEKKDDDAGYHLDGLMDQRVRDAIETELAQKGFSKSEAAGA
DLLVNYLTKVDKKINVDTFNTSYGYNPYWGPGWGWGGNVQTQTTVREYEVGTLIIDLIDNKSGKLVWRGSVADTIRDSNT
PQERETKVREAVAGVMLNYPPKSDTK
>Mature_186_residues
MKKIIVVAALLALSACSSMKTSWDFDPGVTFNQYKTYAWVEKKDDDAGYHLDGLMDQRVRDAIETELAQKGFSKSEAAGA
DLLVNYLTKVDKKINVDTFNTSYGYNPYWGPGWGWGGNVQTQTTVREYEVGTLIIDLIDNKSGKLVWRGSVADTIRDSNT
PQERETKVREAVAGVMLNYPPKSDTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20772; Mature: 20772

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIVVAALLALSACSSMKTSWDFDPGVTFNQYKTYAWVEKKDDDAGYHLDGLMDQRVR
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEHHHHHHHHHH
DAIETELAQKGFSKSEAAGADLLVNYLTKVDKKINVDTFNTSYGYNPYWGPGWGWGGNVQ
HHHHHHHHHCCCCCCHHCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
TQTTVREYEVGTLIIDLIDNKSGKLVWRGSVADTIRDSNTPQERETKVREAVAGVMLNYP
CCHHHHHEECCEEEEEEECCCCCCEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHEECC
PKSDTK
CCCCCC
>Mature Secondary Structure
MKKIIVVAALLALSACSSMKTSWDFDPGVTFNQYKTYAWVEKKDDDAGYHLDGLMDQRVR
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEHHHHHHHHHH
DAIETELAQKGFSKSEAAGADLLVNYLTKVDKKINVDTFNTSYGYNPYWGPGWGWGGNVQ
HHHHHHHHHCCCCCCHHCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
TQTTVREYEVGTLIIDLIDNKSGKLVWRGSVADTIRDSNTPQERETKVREAVAGVMLNYP
CCHHHHHEECCEEEEEEECCCCCCEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHEECC
PKSDTK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA