Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775577

Identifier: 119775577

GI number: 119775577

Start: 2940576

End: 2941145

Strand: Direct

Name: 119775577

Synonym: Sama_2443

Alternate gene names: NA

Gene position: 2940576-2941145 (Clockwise)

Preceding gene: 119775576

Following gene: 119775589

Centisome position: 68.29

GC content: 57.37

Gene sequence:

>570_bases
ATGTCCAAACAAGCGATTCTCGAGGCCCTGAAATCCTCCGCCATGGAAAAAGTGGCCATGCCAACCATAGACATAGCGCC
GGTAACGACAGACCTTAAGGCATACCTGGCCCAGAGCCTGGCCACGGTTGCCGGACGTTTGGAAGACGGTGGTTTGGCCG
CGCTGAATGCCCGTGTTCTTGAGCTGATGGCCGGTGGCAACAAGGTGCTGTCGACCCTGGCAGACGTACCGGGTAACCAC
AATGGCGCTGACGACCCACACGGCCTAGCCGATGTGGACTTTGCTGTCATAAAAGGCGAGTTCGCCGTGGCCGAAAACGG
CGCCGTCTGGGTAGCAGAAACGGCGCTGAGTCAGCGTATCGCTCCCTTTATCTGCGAAAACCTGCTACTGGTGGTGGAAA
AGGATGCCATAGTCGCCAATATGCATGAGGCCATGACCCGCCTTGGCAAATTGGATCCGTCCCTGGGGTTTGGGGTATTT
ATTGCTGGCCCCTCCAAAACCGCCGACATTGAGCAGGCTCTGGTAGTGGGTGCTCACGGCGCCTGCAGCCTGAGTTTATA
TCTGGTGTAG

Upstream 100 bases:

>100_bases
AAATACCGCGAACTGCCTGCTGCGCCCGGCTCCAGTTTCGAAGGCTGGGTGAAAAAGAACAGACCCGAGCTGTTGGTGAA
GTCTAAGGGGGAGAAATAAG

Downstream 100 bases:

>100_bases
TGGACACTTCCTTTAGCAACAAAAAACGCCGCATTTATGCGGCGTTTTTTTATTGATGTTATCGCTCTACCCGAAAGTCC
AGCCTGACTGAGCTTTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: LOW QUALITY PROTEIN YkgG Family Protein

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSKQAILEALKSSAMEKVAMPTIDIAPVTTDLKAYLAQSLATVAGRLEDGGLAALNARVLELMAGGNKVLSTLADVPGNH
NGADDPHGLADVDFAVIKGEFAVAENGAVWVAETALSQRIAPFICENLLLVVEKDAIVANMHEAMTRLGKLDPSLGFGVF
IAGPSKTADIEQALVVGAHGACSLSLYLV

Sequences:

>Translated_189_residues
MSKQAILEALKSSAMEKVAMPTIDIAPVTTDLKAYLAQSLATVAGRLEDGGLAALNARVLELMAGGNKVLSTLADVPGNH
NGADDPHGLADVDFAVIKGEFAVAENGAVWVAETALSQRIAPFICENLLLVVEKDAIVANMHEAMTRLGKLDPSLGFGVF
IAGPSKTADIEQALVVGAHGACSLSLYLV
>Mature_188_residues
SKQAILEALKSSAMEKVAMPTIDIAPVTTDLKAYLAQSLATVAGRLEDGGLAALNARVLELMAGGNKVLSTLADVPGNHN
GADDPHGLADVDFAVIKGEFAVAENGAVWVAETALSQRIAPFICENLLLVVEKDAIVANMHEAMTRLGKLDPSLGFGVFI
AGPSKTADIEQALVVGAHGACSLSLYLV

Specific function: Unknown

COG id: COG1556

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19579; Mature: 19448

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQAILEALKSSAMEKVAMPTIDIAPVTTDLKAYLAQSLATVAGRLEDGGLAALNARVL
CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ELMAGGNKVLSTLADVPGNHNGADDPHGLADVDFAVIKGEFAVAENGAVWVAETALSQRI
HHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCEEEEHHHHHHHH
APFICENLLLVVEKDAIVANMHEAMTRLGKLDPSLGFGVFIAGPSKTADIEQALVVGAHG
HHHHHHHHHEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHCCCCC
ACSLSLYLV
CEEEEEEEC
>Mature Secondary Structure 
SKQAILEALKSSAMEKVAMPTIDIAPVTTDLKAYLAQSLATVAGRLEDGGLAALNARVL
CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ELMAGGNKVLSTLADVPGNHNGADDPHGLADVDFAVIKGEFAVAENGAVWVAETALSQRI
HHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCCEEEEHHHHHHHH
APFICENLLLVVEKDAIVANMHEAMTRLGKLDPSLGFGVFIAGPSKTADIEQALVVGAHG
HHHHHHHHHEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHCCCCC
ACSLSLYLV
CEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA