| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is guaB [H]
Identifier: 119775493
GI number: 119775493
Start: 2834206
End: 2835672
Strand: Reverse
Name: guaB [H]
Synonym: Sama_2359
Alternate gene names: 119775493
Gene position: 2835672-2834206 (Counterclockwise)
Preceding gene: 119775495
Following gene: 119775492
Centisome position: 65.85
GC content: 56.51
Gene sequence:
>1467_bases ATGCTACGTTTAATCAAAGAAGCGCTGACTTTTGACGATGTGTTACTGGTCCCTGCGCACTCAACCGTCCTCCCTAATAC CGCAATCCTCAAGACTCGACTGACTCAAAAAATCGAGCTCAACATTCCTCTGGTGTCTGCCGCCATGGATACCGTCACTG AAGCCCGTTTGGCAATTGCCATGGCTCAGGAAGGTGGTTTGGGCTTTATTCATAAAAACATGAGCATCGAGGCCCAGGCT GAAGAAGTCCGCAAGGTTAAAATCTACGAAGCCGGTGTGGTACAGGACCCTGTGACTGTAACTCCGGGCACCACCTTGGC TGAGCTGCGTAAGCTCACCGAGCGTAACGGCTTTGCCGGTTACCCCGTGGTGAACGAAGCCAACGAGCTGGTAGGCATCA TCACTGGCCGTGACGTACGCTTTGTGACCGACTGGTCCAAAACCGTGCAGGAAGTGATGACCCCGAAAGAACGTCTGGTG ACGGTTCCTGAAGGCACTAAGCTGGAAGACGTGCAAAAGCTGATGCACACCAACCGTATCGAAAAGGTACTGGTAGTAGA CGACAGCTTCTGCCTTAAAGGTCTTATCACTGTTAAAGACTTCGAAAAAGCTGAACGTAAGCCAAACGCCTGTAAAGACG AGCTGGGTCGCCTGCGTGTGGGCGCCGCTGTAGGTGCCGGTGCTGGCAACGAAGAGCGTGTTGATGCCCTGGTGAAAGCC GGTGTGGACGTACTGCTTATCGACTCATCCCATGGTCACTCCGAAGGCGTGTTGCAGCGTATCCGCGACACCCGCGCCAA GTATCCAGACTTGCAAATTATCGGTGGTAACGTGGCCACAGCTGAAGGCGCACTGGCGCTGGTTGAAGCCGGTGTAAACG CAGTGAAAGTGGGTATCGGCCCCGGCTCTATCTGTACCACCCGTATCGTTACCGGTGTGGGCGTACCACAAATCACAGCC GTGTCCGATGCCGCAGCTGCCGTTAAGCACCTGAATGTACCCGTGATTGCCGACGGCGGTATCCGCTTCTCCGGTGACCT TGCCAAGGCGCTGGCTGCCGGTGCATCGTGCATTATGGCCGGCTCCATGTTTGCCGGTACCGACGAAGCCCCGGGTGAAA CCGAGCTGTATCAGGGCCGCGCTTACAAGTCTTACCGCGGCATGGGTTCCCTTGGCGCCATGAGCCAGGGTTCATCCGAC CGTTACTTCCAGAGCGATAACGCCGCCGACAAGCTGGTGCCCGAGGGTATCGAAGGTCGTGTGCCATACAAGGGCAAGCT CAAGGAAATCATTCACCAGCACATGGGCGGCCTGCGCTCCTGTATGGGCCTCACCGGCTGCGCCACCATCAAAGAATTGG GTGAGAAGGCCCAGTTCGTGAAGGTGACCTCTGCCGGTATGGGCGAGTCCCACGTGCACGATGTGACCATCACCAAAGAA GCCCCGAACTACCGTACCGGCGGCTGA
Upstream 100 bases:
>100_bases TAATTTTTCACAATTTTGCATTTACCGACCCTCACTTGCAAGGTATAATGCCGCCGCAATATTTCACCTCTACTTATCCT ACCCAAGGGGAGATGTTGCA
Downstream 100 bases:
>100_bases TTGAAAAGGGCGGCTGCGTGTCGCCCTTGCTGTACCTGATGTCCGGTGCTCTTCTGCACCGGAATAAGATAAATGCCAAA TGAGATAAAGGTTTTCCATG
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MLRLIKEALTFDDVLLVPAHSTVLPNTAILKTRLTQKIELNIPLVSAAMDTVTEARLAIAMAQEGGLGFIHKNMSIEAQA EEVRKVKIYEAGVVQDPVTVTPGTTLAELRKLTERNGFAGYPVVNEANELVGIITGRDVRFVTDWSKTVQEVMTPKERLV TVPEGTKLEDVQKLMHTNRIEKVLVVDDSFCLKGLITVKDFEKAERKPNACKDELGRLRVGAAVGAGAGNEERVDALVKA GVDVLLIDSSHGHSEGVLQRIRDTRAKYPDLQIIGGNVATAEGALALVEAGVNAVKVGIGPGSICTTRIVTGVGVPQITA VSDAAAAVKHLNVPVIADGGIRFSGDLAKALAAGASCIMAGSMFAGTDEAPGETELYQGRAYKSYRGMGSLGAMSQGSSD RYFQSDNAADKLVPEGIEGRVPYKGKLKEIIHQHMGGLRSCMGLTGCATIKELGEKAQFVKVTSAGMGESHVHDVTITKE APNYRTGG
Sequences:
>Translated_488_residues MLRLIKEALTFDDVLLVPAHSTVLPNTAILKTRLTQKIELNIPLVSAAMDTVTEARLAIAMAQEGGLGFIHKNMSIEAQA EEVRKVKIYEAGVVQDPVTVTPGTTLAELRKLTERNGFAGYPVVNEANELVGIITGRDVRFVTDWSKTVQEVMTPKERLV TVPEGTKLEDVQKLMHTNRIEKVLVVDDSFCLKGLITVKDFEKAERKPNACKDELGRLRVGAAVGAGAGNEERVDALVKA GVDVLLIDSSHGHSEGVLQRIRDTRAKYPDLQIIGGNVATAEGALALVEAGVNAVKVGIGPGSICTTRIVTGVGVPQITA VSDAAAAVKHLNVPVIADGGIRFSGDLAKALAAGASCIMAGSMFAGTDEAPGETELYQGRAYKSYRGMGSLGAMSQGSSD RYFQSDNAADKLVPEGIEGRVPYKGKLKEIIHQHMGGLRSCMGLTGCATIKELGEKAQFVKVTSAGMGESHVHDVTITKE APNYRTGG >Mature_488_residues MLRLIKEALTFDDVLLVPAHSTVLPNTAILKTRLTQKIELNIPLVSAAMDTVTEARLAIAMAQEGGLGFIHKNMSIEAQA EEVRKVKIYEAGVVQDPVTVTPGTTLAELRKLTERNGFAGYPVVNEANELVGIITGRDVRFVTDWSKTVQEVMTPKERLV TVPEGTKLEDVQKLMHTNRIEKVLVVDDSFCLKGLITVKDFEKAERKPNACKDELGRLRVGAAVGAGAGNEERVDALVKA GVDVLLIDSSHGHSEGVLQRIRDTRAKYPDLQIIGGNVATAEGALALVEAGVNAVKVGIGPGSICTTRIVTGVGVPQITA VSDAAAAVKHLNVPVIADGGIRFSGDLAKALAAGASCIMAGSMFAGTDEAPGETELYQGRAYKSYRGMGSLGAMSQGSSD RYFQSDNAADKLVPEGIEGRVPYKGKLKEIIHQHMGGLRSCMGLTGCATIKELGEKAQFVKVTSAGMGESHVHDVTITKE APNYRTGG
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=483, Percent_Identity=41.407867494824, Blast_Score=335, Evalue=5e-92, Organism=Homo sapiens, GI217035146, Length=452, Percent_Identity=41.5929203539823, Blast_Score=332, Evalue=4e-91, Organism=Homo sapiens, GI34328928, Length=452, Percent_Identity=41.5929203539823, Blast_Score=332, Evalue=6e-91, Organism=Homo sapiens, GI34328930, Length=452, Percent_Identity=41.5929203539823, Blast_Score=332, Evalue=7e-91, Organism=Homo sapiens, GI156616279, Length=452, Percent_Identity=41.5929203539823, Blast_Score=331, Evalue=8e-91, Organism=Homo sapiens, GI217035152, Length=446, Percent_Identity=41.7040358744395, Blast_Score=325, Evalue=5e-89, Organism=Homo sapiens, GI217035148, Length=452, Percent_Identity=40.4867256637168, Blast_Score=318, Evalue=1e-86, Organism=Homo sapiens, GI217035150, Length=452, Percent_Identity=38.0530973451327, Blast_Score=290, Evalue=2e-78, Organism=Homo sapiens, GI156104880, Length=246, Percent_Identity=38.2113821138211, Blast_Score=165, Evalue=9e-41, Organism=Homo sapiens, GI50541956, Length=247, Percent_Identity=37.246963562753, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI50541954, Length=247, Percent_Identity=37.246963562753, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI50541952, Length=247, Percent_Identity=37.246963562753, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI50541948, Length=247, Percent_Identity=37.246963562753, Blast_Score=162, Evalue=6e-40, Organism=Escherichia coli, GI1788855, Length=487, Percent_Identity=80.4928131416838, Blast_Score=738, Evalue=0.0, Organism=Escherichia coli, GI1786293, Length=221, Percent_Identity=35.7466063348416, Blast_Score=139, Evalue=5e-34, Organism=Caenorhabditis elegans, GI71994385, Length=475, Percent_Identity=35.1578947368421, Blast_Score=254, Evalue=7e-68, Organism=Caenorhabditis elegans, GI71994389, Length=422, Percent_Identity=37.2037914691943, Blast_Score=246, Evalue=3e-65, Organism=Caenorhabditis elegans, GI17560440, Length=238, Percent_Identity=37.3949579831933, Blast_Score=158, Evalue=6e-39, Organism=Saccharomyces cerevisiae, GI6323585, Length=483, Percent_Identity=39.3374741200828, Blast_Score=329, Evalue=6e-91, Organism=Saccharomyces cerevisiae, GI6322012, Length=486, Percent_Identity=38.8888888888889, Blast_Score=327, Evalue=3e-90, Organism=Saccharomyces cerevisiae, GI6323464, Length=482, Percent_Identity=39.4190871369295, Blast_Score=320, Evalue=4e-88, Organism=Saccharomyces cerevisiae, GI6319352, Length=342, Percent_Identity=40.3508771929825, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6319353, Length=122, Percent_Identity=39.344262295082, Blast_Score=77, Evalue=6e-15, Organism=Drosophila melanogaster, GI24641071, Length=483, Percent_Identity=39.1304347826087, Blast_Score=317, Evalue=1e-86, Organism=Drosophila melanogaster, GI24641073, Length=483, Percent_Identity=39.1304347826087, Blast_Score=317, Evalue=1e-86, Organism=Drosophila melanogaster, GI28571163, Length=441, Percent_Identity=39.6825396825397, Blast_Score=290, Evalue=2e-78,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51823; Mature: 51823
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLIKEALTFDDVLLVPAHSTVLPNTAILKTRLTQKIELNIPLVSAAMDTVTEARLAIA CHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHEE MAQEGGLGFIHKNMSIEAQAEEVRKVKIYEAGVVQDPVTVTPGTTLAELRKLTERNGFAG EECCCCEEEEECCCCCEECHHHHHEEEEEECCCCCCCEEECCCCHHHHHHHHHHCCCCCC YPVVNEANELVGIITGRDVRFVTDWSKTVQEVMTPKERLVTVPEGTKLEDVQKLMHTNRI CCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHCCHHHEEECCCCCCHHHHHHHHHHCCC EKVLVVDDSFCLKGLITVKDFEKAERKPNACKDELGRLRVGAAVGAGAGNEERVDALVKA CEEEEECCCHHHHCEEEHHHHHHHHCCCCHHHHHHCCEEECCEECCCCCCHHHHHHHHHC GVDVLLIDSSHGHSEGVLQRIRDTRAKYPDLQIIGGNVATAEGALALVEAGVNAVKVGIG CCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCEECCCCHHHHHHCCCCEEEEECC PGSICTTRIVTGVGVPQITAVSDAAAAVKHLNVPVIADGGIRFSGDLAKALAAGASCIMA CCCHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCEEECCCEEECHHHHHHHHCCCHHEEE GSMFAGTDEAPGETELYQGRAYKSYRGMGSLGAMSQGSSDRYFQSDNAADKLVPEGIEGR CCEECCCCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC VPYKGKLKEIIHQHMGGLRSCMGLTGCATIKELGEKAQFVKVTSAGMGESHVHDVTITKE CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECC APNYRTGG CCCCCCCC >Mature Secondary Structure MLRLIKEALTFDDVLLVPAHSTVLPNTAILKTRLTQKIELNIPLVSAAMDTVTEARLAIA CHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHEE MAQEGGLGFIHKNMSIEAQAEEVRKVKIYEAGVVQDPVTVTPGTTLAELRKLTERNGFAG EECCCCEEEEECCCCCEECHHHHHEEEEEECCCCCCCEEECCCCHHHHHHHHHHCCCCCC YPVVNEANELVGIITGRDVRFVTDWSKTVQEVMTPKERLVTVPEGTKLEDVQKLMHTNRI CCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHCCHHHEEECCCCCCHHHHHHHHHHCCC EKVLVVDDSFCLKGLITVKDFEKAERKPNACKDELGRLRVGAAVGAGAGNEERVDALVKA CEEEEECCCHHHHCEEEHHHHHHHHCCCCHHHHHHCCEEECCEECCCCCCHHHHHHHHHC GVDVLLIDSSHGHSEGVLQRIRDTRAKYPDLQIIGGNVATAEGALALVEAGVNAVKVGIG CCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCEECCCCHHHHHHCCCCEEEEECC PGSICTTRIVTGVGVPQITAVSDAAAAVKHLNVPVIADGGIRFSGDLAKALAAGASCIMA CCCHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCEEECCCEEECHHHHHHHHCCCHHEEE GSMFAGTDEAPGETELYQGRAYKSYRGMGSLGAMSQGSSDRYFQSDNAADKLVPEGIEGR CCEECCCCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC VPYKGKLKEIIHQHMGGLRSCMGLTGCATIKELGEKAQFVKVTSAGMGESHVHDVTITKE CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECC APNYRTGG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]