| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is guaA
Identifier: 119775492
GI number: 119775492
Start: 2832531
End: 2834108
Strand: Reverse
Name: guaA
Synonym: Sama_2358
Alternate gene names: 119775492
Gene position: 2834108-2832531 (Counterclockwise)
Preceding gene: 119775493
Following gene: 119775490
Centisome position: 65.82
GC content: 56.65
Gene sequence:
>1578_bases ATGAGCAACATTCATGAGCACAAGATACTTATTCTGGATTTCGGCTCTCAGTACACTCAGCTGATCGCCCGCCGTATTCG TGAAATCGGCGTGTACTGCGAACTCTGGGCCTGGGATGTGACCGAAGCGCAAATCCGTGAATTTGCCCCTAACGGTATTG TTCTGGCCGGTGGTCCCGAGTCGGTAACCGAAGATAACTCTCCCCGCGCTCCCGAGTACGTGTTCGACGCCGGTGTGCCT GTGCTGGGGATTTGCTACGGCATGCAGACCATGAGCGAGCAGCTGGGCGGTAAGGTTATTCAGGGTGTTGGCGAGCGTGA GTTCGGTTATGCCCAGGTGGAAGTACTCACCGACAGCGCACTGCTGCGTCATATCGAAGACGGTATCTCTGATGCCGGCA AGCCAGTGCTGGACGTATGGATGAGCCACGGCGACAAGGTGTCTGCCATTCCTGAAGGCTTTGTGGCCGTTGCCAAGACT GAAACCTGTCCGTTTGCCGTGATGGCCAACGAAGACAAGAAGTTTTACGGCGTACAGTTCCACCCTGAAGTGACCCACAC CCGTCAGGGCAAGCGCATGCTCGAACACTTTGTGATGGACATCTGTGGCTGTGACAACAAATGGCAGCCAGCCTCCATCA TCGAAGACGCCGTTGAGCGCATCAAAGCCCAGGTGGGTGACGATGAAGTGATCCTCGGCCTCTCAGGCGGTGTGGATTCA TCCGTGACTGCCATGCTGCTGCACCGTGCCATCGGCGAGCGCCTGACCTGTGTGTTCGTTGACAACGGCCTTTTGCGTCT CAATGAAGCCAAGCAGGTACTGGAAATGTTCGGTGACCACTTTGGTCTCAACATCGTCCACGTGGATGCCGAAAACCGCT TCCTCGAAGCGCTCAAGGGCGAAAACGACCCAGAAGCCAAGCGTAAGATCATTGGCCGCGTATTCGTGGAAATCTTCGAC GAAGAAGCCTCCAAGTGTGTTAACGCCAAGTGGCTGGCTCAGGGCACCATTTACCCTGACGTGATTGAATCTGCAGGCAG CGCCACCGGCAAGGCCCATGTGATCAAGTCACATCACAACGTGGGCGGTCTGCCGGATGACATGGAGCTGGGCTTGGTTG AGCCACTGCGGGAACTCTTCAAAGACGAAGTACGTAAGATTGGTCTGGAACTCGGCCTGCCTTACGACATGCTCTATCGC CACCCATTCCCAGGCCCGGGCCTTGGGGTGCGTGTACTGGGCGAAGTGAAGAAAGAGTACTGCGACCTTTTGCGCCGCGC TGATGCCATCTTCATCGAAGAGCTGCACCGCGCCGATCTGTACAACAAGGTCAGCCAGGCGTTCACCGTGTTCCTGCCGG TTCGCAGTGTGGGCGTGATGGGCGATGGCCGTAAGTACGACTGGGTTGTGTCGCTGCGCGCCGTCGAAACCATCGACTTT ATGACTGCACACTGGGCGCACCTGCCATATGATTTCCTTGGCCGCGTTTCCAACCGCATCATCAACGAAGTCGACGGCAT CTCCCGCGTGGTGTATGACATCTCCGGCAAGCCACCTGCCACCATCGAGTGGGAATAA
Upstream 100 bases:
>100_bases TGATTGAAAAGGGCGGCTGCGTGTCGCCCTTGCTGTACCTGATGTCCGGTGCTCTTCTGCACCGGAATAAGATAAATGCC AAATGAGATAAAGGTTTTCC
Downstream 100 bases:
>100_bases GCCTGAGGCTTATCTGGGCTAACCCTCTAAAAAGGCGCTTCGGCGCCTTTTTTATTTGAACTCTAATCAAGCTTCCTACT TTGGGTTTTGTTGATGATTT
Product: GMP synthase
Products: NA
Alternate protein names: GMP synthetase; Glutamine amidotransferase
Number of amino acids: Translated: 525; Mature: 524
Protein sequence:
>525_residues MSNIHEHKILILDFGSQYTQLIARRIREIGVYCELWAWDVTEAQIREFAPNGIVLAGGPESVTEDNSPRAPEYVFDAGVP VLGICYGMQTMSEQLGGKVIQGVGEREFGYAQVEVLTDSALLRHIEDGISDAGKPVLDVWMSHGDKVSAIPEGFVAVAKT ETCPFAVMANEDKKFYGVQFHPEVTHTRQGKRMLEHFVMDICGCDNKWQPASIIEDAVERIKAQVGDDEVILGLSGGVDS SVTAMLLHRAIGERLTCVFVDNGLLRLNEAKQVLEMFGDHFGLNIVHVDAENRFLEALKGENDPEAKRKIIGRVFVEIFD EEASKCVNAKWLAQGTIYPDVIESAGSATGKAHVIKSHHNVGGLPDDMELGLVEPLRELFKDEVRKIGLELGLPYDMLYR HPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELHRADLYNKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDF MTAHWAHLPYDFLGRVSNRIINEVDGISRVVYDISGKPPATIEWE
Sequences:
>Translated_525_residues MSNIHEHKILILDFGSQYTQLIARRIREIGVYCELWAWDVTEAQIREFAPNGIVLAGGPESVTEDNSPRAPEYVFDAGVP VLGICYGMQTMSEQLGGKVIQGVGEREFGYAQVEVLTDSALLRHIEDGISDAGKPVLDVWMSHGDKVSAIPEGFVAVAKT ETCPFAVMANEDKKFYGVQFHPEVTHTRQGKRMLEHFVMDICGCDNKWQPASIIEDAVERIKAQVGDDEVILGLSGGVDS SVTAMLLHRAIGERLTCVFVDNGLLRLNEAKQVLEMFGDHFGLNIVHVDAENRFLEALKGENDPEAKRKIIGRVFVEIFD EEASKCVNAKWLAQGTIYPDVIESAGSATGKAHVIKSHHNVGGLPDDMELGLVEPLRELFKDEVRKIGLELGLPYDMLYR HPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELHRADLYNKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDF MTAHWAHLPYDFLGRVSNRIINEVDGISRVVYDISGKPPATIEWE >Mature_524_residues SNIHEHKILILDFGSQYTQLIARRIREIGVYCELWAWDVTEAQIREFAPNGIVLAGGPESVTEDNSPRAPEYVFDAGVPV LGICYGMQTMSEQLGGKVIQGVGEREFGYAQVEVLTDSALLRHIEDGISDAGKPVLDVWMSHGDKVSAIPEGFVAVAKTE TCPFAVMANEDKKFYGVQFHPEVTHTRQGKRMLEHFVMDICGCDNKWQPASIIEDAVERIKAQVGDDEVILGLSGGVDSS VTAMLLHRAIGERLTCVFVDNGLLRLNEAKQVLEMFGDHFGLNIVHVDAENRFLEALKGENDPEAKRKIIGRVFVEIFDE EASKCVNAKWLAQGTIYPDVIESAGSATGKAHVIKSHHNVGGLPDDMELGLVEPLRELFKDEVRKIGLELGLPYDMLYRH PFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELHRADLYNKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDFM TAHWAHLPYDFLGRVSNRIINEVDGISRVVYDISGKPPATIEWE
Specific function: Catalyzes the synthesis of GMP from XMP
COG id: COG0519
COG function: function code F; GMP synthase, PP-ATPase domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GMP-binding domain
Homologues:
Organism=Homo sapiens, GI4504035, Length=568, Percent_Identity=35.7394366197183, Blast_Score=292, Evalue=6e-79, Organism=Escherichia coli, GI1788854, Length=523, Percent_Identity=84.321223709369, Blast_Score=929, Evalue=0.0, Organism=Caenorhabditis elegans, GI71992710, Length=580, Percent_Identity=34.8275862068965, Blast_Score=281, Evalue=6e-76, Organism=Caenorhabditis elegans, GI133901714, Length=580, Percent_Identity=34.8275862068965, Blast_Score=281, Evalue=6e-76, Organism=Caenorhabditis elegans, GI71992717, Length=580, Percent_Identity=34.8275862068965, Blast_Score=281, Evalue=6e-76, Organism=Saccharomyces cerevisiae, GI6323873, Length=523, Percent_Identity=49.5219885277247, Blast_Score=526, Evalue=1e-150, Organism=Drosophila melanogaster, GI281365319, Length=565, Percent_Identity=34.5132743362832, Blast_Score=278, Evalue=9e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GUAA_SHEAM (A1S856)
Other databases:
- EMBL: CP000507 - RefSeq: YP_928232.1 - ProteinModelPortal: A1S856 - SMR: A1S856 - STRING: A1S856 - GeneID: 4604607 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_2358 - NMPDR: fig|326297.7.peg.2208 - eggNOG: COG0519 - HOGENOM: HBG391775 - OMA: MKLVEPL - PhylomeDB: A1S856 - ProtClustDB: PRK00074 - HAMAP: MF_00344 - InterPro: IPR006220 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR001674 - InterPro: IPR004739 - InterPro: IPR022955 - InterPro: IPR022310 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PRINTS: PR00097 - PRINTS: PR00096 - TIGRFAMs: TIGR00884 - TIGRFAMs: TIGR00888
Pfam domain/function: PF00117 GATase; PF00958 GMP_synt_C; PF02540 NAD_synthase
EC number: =6.3.5.2
Molecular weight: Translated: 58462; Mature: 58330
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 85-85 ACT_SITE 181-181 ACT_SITE 183-183
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIHEHKILILDFGSQYTQLIARRIREIGVYCELWAWDVTEAQIREFAPNGIVLAGGPE CCCCCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHCCCCCEEEECCCC SVTEDNSPRAPEYVFDAGVPVLGICYGMQTMSEQLGGKVIQGVGEREFGYAQVEVLTDSA CCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEEHHHH LLRHIEDGISDAGKPVLDVWMSHGDKVSAIPEGFVAVAKTETCPFAVMANEDKKFYGVQF HHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCCEEEEECCCCCEEEEECCCCEEEEEEE HPEVTHTRQGKRMLEHFVMDICGCDNKWQPASIIEDAVERIKAQVGDDEVILGLSGGVDS CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCH SVTAMLLHRAIGERLTCVFVDNGLLRLNEAKQVLEMFGDHFGLNIVHVDAENRFLEALKG HHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCC ENDPEAKRKIIGRVFVEIFDEEASKCVNAKWLAQGTIYPDVIESAGSATGKAHVIKSHHN CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHCCCCCCCEEEEECCCC VGGLPDDMELGLVEPLRELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGVRVLGEVKKEY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHH CDLLRRADAIFIEELHRADLYNKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHCCCCCCCCCEEEEEEEHHHHHHHH MTAHWAHLPYDFLGRVSNRIINEVDGISRVVYDISGKPPATIEWE HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEECC >Mature Secondary Structure SNIHEHKILILDFGSQYTQLIARRIREIGVYCELWAWDVTEAQIREFAPNGIVLAGGPE CCCCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHCCCCCEEEECCCC SVTEDNSPRAPEYVFDAGVPVLGICYGMQTMSEQLGGKVIQGVGEREFGYAQVEVLTDSA CCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEEHHHH LLRHIEDGISDAGKPVLDVWMSHGDKVSAIPEGFVAVAKTETCPFAVMANEDKKFYGVQF HHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCCEEEEECCCCCEEEEECCCCEEEEEEE HPEVTHTRQGKRMLEHFVMDICGCDNKWQPASIIEDAVERIKAQVGDDEVILGLSGGVDS CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCH SVTAMLLHRAIGERLTCVFVDNGLLRLNEAKQVLEMFGDHFGLNIVHVDAENRFLEALKG HHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCC ENDPEAKRKIIGRVFVEIFDEEASKCVNAKWLAQGTIYPDVIESAGSATGKAHVIKSHHN CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHCCCCCCCEEEEECCCC VGGLPDDMELGLVEPLRELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGVRVLGEVKKEY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHH CDLLRRADAIFIEELHRADLYNKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHCCCCCCCCCEEEEEEEHHHHHHHH MTAHWAHLPYDFLGRVSNRIINEVDGISRVVYDISGKPPATIEWE HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA