Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775457

Identifier: 119775457

GI number: 119775457

Start: 2786900

End: 2787235

Strand: Direct

Name: 119775457

Synonym: Sama_2322

Alternate gene names: NA

Gene position: 2786900-2787235 (Clockwise)

Preceding gene: 119775456

Following gene: 119775458

Centisome position: 64.72

GC content: 54.76

Gene sequence:

>336_bases
ATGGCCATCGAATTACCCAAAAACAATGCCGCGTCCAACCGCGTCGGCAACACCAGCAGTCCACTGACCAGTGCCCGCAC
TGCCCAGGCATCGGCAGCTCAAACCGCGCAGCCACAGGTACCTCAAAAGGCCGACTCGGTGATGATCACCAGTCAGGCTC
AGCAATTGCAAAGCGTGCAGTCAAAGCTGTCTTCTCTGCCTGAAGTTGACCAAAAGAAAGTGGCCGAAATCAAGCAAGCC
ATAGCGGAAGGGCGTTATAAAATTGACCCTGAGAAGCTCGCGGCCAATATCGCCAGCTTTGAAGCAGAATTACAGGAATT
GGGCCGCGACGCCTGA

Upstream 100 bases:

>100_bases
TTGGCGAAGTGGAAGTCAAAATGTAAAATACCCTAAAGCTTTGCTGGCTGCGGCCGATAATAATCACAAGAAACCCAAAT
CCGTGACACTGGAGCCCGAA

Downstream 100 bases:

>100_bases
TTTTCAGCACGGATTGGGAAACATCCAAAGCCGGCCATTTGATTATGGCCGGCTTTTTGCATTCATTTATTACTACCCCT
GATGTCAATAAAACCGGGAT

Product: putative anti-sigma-28 factor, FlgM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MAIELPKNNAASNRVGNTSSPLTSARTAQASAAQTAQPQVPQKADSVMITSQAQQLQSVQSKLSSLPEVDQKKVAEIKQA
IAEGRYKIDPEKLAANIASFEAELQELGRDA

Sequences:

>Translated_111_residues
MAIELPKNNAASNRVGNTSSPLTSARTAQASAAQTAQPQVPQKADSVMITSQAQQLQSVQSKLSSLPEVDQKKVAEIKQA
IAEGRYKIDPEKLAANIASFEAELQELGRDA
>Mature_110_residues
AIELPKNNAASNRVGNTSSPLTSARTAQASAAQTAQPQVPQKADSVMITSQAQQLQSVQSKLSSLPEVDQKKVAEIKQAI
AEGRYKIDPEKLAANIASFEAELQELGRDA

Specific function: Unknown

COG id: COG2747

COG function: function code KNU; Negative regulator of flagellin synthesis (anti-sigma28 factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11804; Mature: 11673

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIELPKNNAASNRVGNTSSPLTSARTAQASAAQTAQPQVPQKADSVMITSQAQQLQSVQ
CEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
SKLSSLPEVDQKKVAEIKQAIAEGRYKIDPEKLAANIASFEAELQELGRDA
HHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AIELPKNNAASNRVGNTSSPLTSARTAQASAAQTAQPQVPQKADSVMITSQAQQLQSVQ
EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
SKLSSLPEVDQKKVAEIKQAIAEGRYKIDPEKLAANIASFEAELQELGRDA
HHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA