Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775458

Identifier: 119775458

GI number: 119775458

Start: 2787344

End: 2787778

Strand: Direct

Name: 119775458

Synonym: Sama_2323

Alternate gene names: NA

Gene position: 2787344-2787778 (Clockwise)

Preceding gene: 119775457

Following gene: 119775461

Centisome position: 64.73

GC content: 52.64

Gene sequence:

>435_bases
ATGGACCACGTCAATGAACTCAATCAGTTGCTCGATGCGCAACAAAGCCTGCTGGAGCAACTTCTGGCCGCTATGGCAGC
TGAACGTGCAGCCTTGATTGCCCAAAACGCTTCTGAGCTGATGGCCATCGCAGAGCACAAGTCATCTGCCCTGTTACGAC
TGAAGCAAAATGATGATGCAATGGCGGCTCATCCAGGTCACAGCCTGCTGACAAGCGATAACGCCCTGGCAGCCAAGGTA
GAGTCGATACAACACACACTTGCACGCTGTAAGCACGAAAACGAAGCCAACGCGCAGCTCATCGAGCACAGTCAGGCCAG
TGTTAACCGACTGGCACAGGCGCTACAGGTAAGTCGTAACGCAAGTTCTCTTACCTACACGGATAAGGGTAAAACATCGA
CCATCTCTACCTTGGGCAGCAGCATCGAAGTTTGA

Upstream 100 bases:

>100_bases
ACGGATTGGGAAACATCCAAAGCCGGCCATTTGATTATGGCCGGCTTTTTGCATTCATTTATTACTACCCCTGATGTCAA
TAAAACCGGGATGCAACACC

Downstream 100 bases:

>100_bases
TGCGCCCGGGCCATACACACTTCGTTTCTACCTGCGCCCCCAGGCGAAATACCCTACAAAACGCCCAATATAAAAGCCCC
ATTCTCAGGGGCTTTTTTTA

Product: flagellar biosynthetic protein FlgN

Products: NA

Alternate protein names: Flagellar Biosynthetic Protein FlgN; Chaperone FlgN; Polar Flagellar FlgN

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MDHVNELNQLLDAQQSLLEQLLAAMAAERAALIAQNASELMAIAEHKSSALLRLKQNDDAMAAHPGHSLLTSDNALAAKV
ESIQHTLARCKHENEANAQLIEHSQASVNRLAQALQVSRNASSLTYTDKGKTSTISTLGSSIEV

Sequences:

>Translated_144_residues
MDHVNELNQLLDAQQSLLEQLLAAMAAERAALIAQNASELMAIAEHKSSALLRLKQNDDAMAAHPGHSLLTSDNALAAKV
ESIQHTLARCKHENEANAQLIEHSQASVNRLAQALQVSRNASSLTYTDKGKTSTISTLGSSIEV
>Mature_144_residues
MDHVNELNQLLDAQQSLLEQLLAAMAAERAALIAQNASELMAIAEHKSSALLRLKQNDDAMAAHPGHSLLTSDNALAAKV
ESIQHTLARCKHENEANAQLIEHSQASVNRLAQALQVSRNASSLTYTDKGKTSTISTLGSSIEV

Specific function: Unknown

COG id: COG3418

COG function: function code NUO; Flagellar biosynthesis/type III secretory pathway chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15434; Mature: 15434

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHVNELNQLLDAQQSLLEQLLAAMAAERAALIAQNASELMAIAEHKSSALLRLKQNDDA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
MAAHPGHSLLTSDNALAAKVESIQHTLARCKHENEANAQLIEHSQASVNRLAQALQVSRN
CCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ASSLTYTDKGKTSTISTLGSSIEV
CCCCEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MDHVNELNQLLDAQQSLLEQLLAAMAAERAALIAQNASELMAIAEHKSSALLRLKQNDDA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
MAAHPGHSLLTSDNALAAKVESIQHTLARCKHENEANAQLIEHSQASVNRLAQALQVSRN
CCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ASSLTYTDKGKTSTISTLGSSIEV
CCCCEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA