Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is flgI

Identifier: 119775446

GI number: 119775446

Start: 2777392

End: 2778483

Strand: Reverse

Name: flgI

Synonym: Sama_2311

Alternate gene names: 119775446

Gene position: 2778483-2777392 (Counterclockwise)

Preceding gene: 119775447

Following gene: 119775445

Centisome position: 64.52

GC content: 53.94

Gene sequence:

>1092_bases
ATGAAAATCAAGGTTCTGCTTGCCGTGGCCTTGCTGGCCATGACAGTGCCGGTTAAAGCCGAGCGCATTAAAGATATCGC
CGCCGTTCAGGGTGTGCGCAGTAACCAATTGATTGGTTATGGATTGGTGGTGGGTTTGCCGGGCACGGGTGAAAAGGCAA
ATTACACAGAGCAAACTTTTACCACCATGCTGAAAAACTTCGGCATTAATTTGCCGACCAACGTAAAGCCCAAGATTAAA
AACGTGGCCGTAGTGGCAGTGCATGCCGATATGCCACCTTTCATCAAACCCGGCCAGACGCTGGATGTCACAGTGTCCAG
CATAGGCGAGGCCAAGAGTCTGCGTGGTGGAACTCTGCTGCAAACCTTCCTTAAAGGGGTGGATGGCAACATCTACGCCA
TTGCGCAGGGCAGCATGGTGGTGTCCGGTTTCAGTGCCGAAGGGCTTGATGGATCCAAGGTTATTCAGAATACCCCAACA
GTGGGCCGTATCCCCAACGGCGCTCTGGTGGAACGGGCCGTGCCGTCTGCTTTTGCCCATGGAGACTTCCTTACCTTTAA
CCTGCACCGAGCCGACTTCTCTACCGCCAAGCGGATGGCCGATGCCATTAACGATTTGTTGGGGCCGGAAATGGCTCGCG
CACTCGATGCAGCCTCGGTTCAGGTGTATGCCCCACGGGATGCCTCACAGCGGGTGTCGTTTCTCGCGACACTGGAGAAC
GTCGAAGTTGAGCCTGCGGATGAGTCGGCCAAGGTGATTGTCAACTCGCGCACCGGCACCATAGTCGTTGGTCAGAATGT
GAAGTTATTACCAGCAGCTGTGACCCATGGTGGTCTGACAGTGACCATTGCTGAAAATCAGCAGGTGTCCCAACCCAATG
CTCTTGCCGGTGGCGATACCGTGGTAACCAACCAAAGCACCATAGATGCGTCTCAGGCCAATAGCCGTATGTTCCTGTTT
AATCCGGGAACCAGCTTGGATGAATTGGTCAGGGCCGTGAATTTGGTTGGTGCTGCACCTTCAGATGTGCTTGCGATCCT
TGAGGCGTTAAAAATGGCAGGCGCCTTGCATGGTGAGCTTATCGTCATTTGA

Upstream 100 bases:

>100_bases
TCAATACAGTGGCACTGGCACCTTTGCCAACTCGCAGCAGGTGGGCTGGCTCAGTCAGTTCTTCCTCAGCGATTGGTGGC
CCTTTTAAAGGAGCTTGGAC

Downstream 100 bases:

>100_bases
TTCTTGTCGGAAAATTGGCAACTCACCATGGAAAAGCTTTCAAACGCCTCACATTTCCTCGACATCGGTGGCCTGGACAA
ATTAAGAGCCCAGGCCAAGG

Product: flagellar basal body P-ring protein

Products: NA

Alternate protein names: Basal body P-ring protein

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKIKVLLAVALLAMTVPVKAERIKDIAAVQGVRSNQLIGYGLVVGLPGTGEKANYTEQTFTTMLKNFGINLPTNVKPKIK
NVAVVAVHADMPPFIKPGQTLDVTVSSIGEAKSLRGGTLLQTFLKGVDGNIYAIAQGSMVVSGFSAEGLDGSKVIQNTPT
VGRIPNGALVERAVPSAFAHGDFLTFNLHRADFSTAKRMADAINDLLGPEMARALDAASVQVYAPRDASQRVSFLATLEN
VEVEPADESAKVIVNSRTGTIVVGQNVKLLPAAVTHGGLTVTIAENQQVSQPNALAGGDTVVTNQSTIDASQANSRMFLF
NPGTSLDELVRAVNLVGAAPSDVLAILEALKMAGALHGELIVI

Sequences:

>Translated_363_residues
MKIKVLLAVALLAMTVPVKAERIKDIAAVQGVRSNQLIGYGLVVGLPGTGEKANYTEQTFTTMLKNFGINLPTNVKPKIK
NVAVVAVHADMPPFIKPGQTLDVTVSSIGEAKSLRGGTLLQTFLKGVDGNIYAIAQGSMVVSGFSAEGLDGSKVIQNTPT
VGRIPNGALVERAVPSAFAHGDFLTFNLHRADFSTAKRMADAINDLLGPEMARALDAASVQVYAPRDASQRVSFLATLEN
VEVEPADESAKVIVNSRTGTIVVGQNVKLLPAAVTHGGLTVTIAENQQVSQPNALAGGDTVVTNQSTIDASQANSRMFLF
NPGTSLDELVRAVNLVGAAPSDVLAILEALKMAGALHGELIVI
>Mature_363_residues
MKIKVLLAVALLAMTVPVKAERIKDIAAVQGVRSNQLIGYGLVVGLPGTGEKANYTEQTFTTMLKNFGINLPTNVKPKIK
NVAVVAVHADMPPFIKPGQTLDVTVSSIGEAKSLRGGTLLQTFLKGVDGNIYAIAQGSMVVSGFSAEGLDGSKVIQNTPT
VGRIPNGALVERAVPSAFAHGDFLTFNLHRADFSTAKRMADAINDLLGPEMARALDAASVQVYAPRDASQRVSFLATLEN
VEVEPADESAKVIVNSRTGTIVVGQNVKLLPAAVTHGGLTVTIAENQQVSQPNALAGGDTVVTNQSTIDASQANSRMFLF
NPGTSLDELVRAVNLVGAAPSDVLAILEALKMAGALHGELIVI

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation

COG id: COG1706

COG function: function code N; Flagellar basal-body P-ring protein

Gene ontology:

Cell location: Periplasm. Bacterial flagellum basal body (By similarity)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgI family

Homologues:

Organism=Escherichia coli, GI1787320, Length=365, Percent_Identity=46.8493150684932, Blast_Score=295, Evalue=4e-81,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGI_SHEAM (A1S810)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_928186.1
- STRING:   A1S810
- GeneID:   4604561
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_2311
- NMPDR:   fig|326297.7.peg.2166
- eggNOG:   COG1706
- HOGENOM:   HBG321070
- OMA:   PGTGEQS
- PhylomeDB:   A1S810
- ProtClustDB:   PRK05303
- HAMAP:   MF_00416
- InterPro:   IPR001782
- PRINTS:   PR01010

Pfam domain/function: PF02119 FlgI

EC number: NA

Molecular weight: Translated: 37970; Mature: 37970

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKVLLAVALLAMTVPVKAERIKDIAAVQGVRSNQLIGYGLVVGLPGTGEKANYTEQTF
CEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHHHH
TTMLKNFGINLPTNVKPKIKNVAVVAVHADMPPFIKPGQTLDVTVSSIGEAKSLRGGTLL
HHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEHHHCCCHHHCCCCHHH
QTFLKGVDGNIYAIAQGSMVVSGFSAEGLDGSKVIQNTPTVGRIPNGALVERAVPSAFAH
HHHHHCCCCCEEEEEECCEEEECCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCHHHCC
GDFLTFNLHRADFSTAKRMADAINDLLGPEMARALDAASVQVYAPRDASQRVSFLATLEN
CCEEEEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHC
VEVEPADESAKVIVNSRTGTIVVGQNVKLLPAAVTHGGLTVTIAENQQVSQPNALAGGDT
CEECCCCCCCEEEEECCCCEEEECCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCE
VVTNQSTIDASQANSRMFLFNPGTSLDELVRAVNLVGAAPSDVLAILEALKMAGALHGEL
EEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEE
IVI
EEC
>Mature Secondary Structure
MKIKVLLAVALLAMTVPVKAERIKDIAAVQGVRSNQLIGYGLVVGLPGTGEKANYTEQTF
CEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHHHH
TTMLKNFGINLPTNVKPKIKNVAVVAVHADMPPFIKPGQTLDVTVSSIGEAKSLRGGTLL
HHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEHHHCCCHHHCCCCHHH
QTFLKGVDGNIYAIAQGSMVVSGFSAEGLDGSKVIQNTPTVGRIPNGALVERAVPSAFAH
HHHHHCCCCCEEEEEECCEEEECCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCHHHCC
GDFLTFNLHRADFSTAKRMADAINDLLGPEMARALDAASVQVYAPRDASQRVSFLATLEN
CCEEEEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHC
VEVEPADESAKVIVNSRTGTIVVGQNVKLLPAAVTHGGLTVTIAENQQVSQPNALAGGDT
CEECCCCCCCEEEEECCCCEEEECCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCE
VVTNQSTIDASQANSRMFLFNPGTSLDELVRAVNLVGAAPSDVLAILEALKMAGALHGEL
EEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEE
IVI
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA