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The map label for this gene is lafA [H]

Identifier: 119775441

GI number: 119775441

Start: 2771108

End: 2771926

Strand: Reverse

Name: lafA [H]

Synonym: Sama_2306

Alternate gene names: 119775441

Gene position: 2771926-2771108 (Counterclockwise)

Preceding gene: 119775442

Following gene: 119775440

Centisome position: 64.37

GC content: 52.5

Gene sequence:

>819_bases
ATGGCCATTACAGTAAACACCAACGTCACTTCAATGAAGGCGCAAAAGAACCTGACCTTGTCTAACCGTGATCTGGCAAC
CTCCATGGAGCGTCTGTCTTCCGGTCTGCGCATTAACAGTGCCAAAGATGACGCCGCAGGTCTTGCCATCTCCAACCGTC
TGAACAGCCAGGTTCGTGGTTTGGAAGTGGGTATGCGTAACGCCAACGATGCTATCTCCATCGCCCAGATTGCCGAAGGT
GCGATGCAGGAGCAGACCAACATGCTGCAGCGTATGCGTGACCTGTCTATTCAGGCAGAGAACGGTGCCAACAGTGCAGA
TGACTTAACCTCTCTGAAAAATGAGATGGACCAGCTGGCGCTGGAAATCACCGCCATCGGTAACACCACAGCTTTCGGTG
ACACCAAACTAATGACCGGCGGATTCTCAAATGGCAAGAAGTTCCAGGTTGGTCACCAGAATGCTGAAGATGTTACTGTT
ACTGTGAAGACCAACAACGCTGGCACCTTGTCTGTTGGAGCCTTGGATGTGACTACATCTGGTGGTCGTAGCACTGCAAT
GCTCAAAATCGACGCTGCTATCAAGAGCATTGACACTCAGCGCGCTTCACTCGGTGCTATCCAGAACCGTCTGGCTCACA
ACATCAGCAACAGTGCCAACACCCAGGCCAACGTTGCTGACGCCAAGAGCCGTATCGTGGATGTGGACTTCGCCAAAGAA
ACCTCTACCATGACCAAGAATCAGGTACTGCAGCAGACTGGATCTGCCATGCTGGCCCAGGCCAACCAGTTGCCTCAAAT
CGCCCTGTCTCTGCTGTAA

Upstream 100 bases:

>100_bases
GGATAAAAAGACGCTGCCGCTAAATATACTGTAACGAGTATGACCGCCTGGCTGAACAAGACAGGCTAGTCCTGAGCCAG
GTAACCAAGAGGAATCGATC

Downstream 100 bases:

>100_bases
TTTCTCAGGGATTGAAGCACGGTGGAGGGAGGTTCGGCAACGGATCTCCCTTTGCCATATCTGGAAATCAGTCACGAAAT
CCCGATTTGTTCGAGATGTG

Product: flagellin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MAITVNTNVTSMKAQKNLTLSNRDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEVGMRNANDAISIAQIAEG
AMQEQTNMLQRMRDLSIQAENGANSADDLTSLKNEMDQLALEITAIGNTTAFGDTKLMTGGFSNGKKFQVGHQNAEDVTV
TVKTNNAGTLSVGALDVTTSGGRSTAMLKIDAAIKSIDTQRASLGAIQNRLAHNISNSANTQANVADAKSRIVDVDFAKE
TSTMTKNQVLQQTGSAMLAQANQLPQIALSLL

Sequences:

>Translated_272_residues
MAITVNTNVTSMKAQKNLTLSNRDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEVGMRNANDAISIAQIAEG
AMQEQTNMLQRMRDLSIQAENGANSADDLTSLKNEMDQLALEITAIGNTTAFGDTKLMTGGFSNGKKFQVGHQNAEDVTV
TVKTNNAGTLSVGALDVTTSGGRSTAMLKIDAAIKSIDTQRASLGAIQNRLAHNISNSANTQANVADAKSRIVDVDFAKE
TSTMTKNQVLQQTGSAMLAQANQLPQIALSLL
>Mature_271_residues
AITVNTNVTSMKAQKNLTLSNRDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEVGMRNANDAISIAQIAEGA
MQEQTNMLQRMRDLSIQAENGANSADDLTSLKNEMDQLALEITAIGNTTAFGDTKLMTGGFSNGKKFQVGHQNAEDVTVT
VKTNNAGTLSVGALDVTTSGGRSTAMLKIDAAIKSIDTQRASLGAIQNRLAHNISNSANTQANVADAKSRIVDVDFAKET
STMTKNQVLQQTGSAMLAQANQLPQIALSLL

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. Essential for lateral flagellar synthesis and swarming motility [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=178, Percent_Identity=44.3820224719101, Blast_Score=132, Evalue=2e-32,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 28728; Mature: 28597

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITVNTNVTSMKAQKNLTLSNRDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG
CEEEEECCCEEEHHHCCCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
LEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLSIQAENGANSADDLTSLKNEMDQLA
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHE
LEITAIGNTTAFGDTKLMTGGFSNGKKFQVGHQNAEDVTVTVKTNNAGTLSVGALDVTTS
EEEEECCCCCCCCCCEEEECCCCCCCEEEECCCCCCEEEEEEEECCCCEEEEEEEEEECC
GGRSTAMLKIDAAIKSIDTQRASLGAIQNRLAHNISNSANTQANVADAKSRIVDVDFAKE
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEECCCH
TSTMTKNQVLQQTGSAMLAQANQLPQIALSLL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure 
AITVNTNVTSMKAQKNLTLSNRDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG
EEEEECCCEEEHHHCCCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
LEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLSIQAENGANSADDLTSLKNEMDQLA
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHE
LEITAIGNTTAFGDTKLMTGGFSNGKKFQVGHQNAEDVTVTVKTNNAGTLSVGALDVTTS
EEEEECCCCCCCCCCEEEECCCCCCCEEEECCCCCCEEEEEEEECCCCEEEEEEEEEECC
GGRSTAMLKIDAAIKSIDTQRASLGAIQNRLAHNISNSANTQANVADAKSRIVDVDFAKE
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEECCCH
TSTMTKNQVLQQTGSAMLAQANQLPQIALSLL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501040; 12620739 [H]