Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775391

Identifier: 119775391

GI number: 119775391

Start: 2719556

End: 2720596

Strand: Reverse

Name: 119775391

Synonym: Sama_2256

Alternate gene names: NA

Gene position: 2720596-2719556 (Counterclockwise)

Preceding gene: 119775392

Following gene: 119775390

Centisome position: 63.18

GC content: 32.47

Gene sequence:

>1041_bases
ATGAAAATAGCACATGTGTACATTGGTAACTCAATTAAACATCCAATAATCAAGACTTATATAGATTTTTCGGCAGAAAT
AGGTGTAACCGAATTAGAGCTTATTGACTCAAAGCAAGAAGGTTCTAGAGTAGCAAGAGTTTTTGATGTTTTAAAGAAGT
TGGTGAATTCAAGAAGCACTATATACCAATCACATGATATAGTGTCATGTATACTAGTAAAAATTTTTAAATGGAACTCT
GTGCATGTATATGACATGCATGAGATCTACTCTTCATATTTCAAAAACTCTATTATTCGGAAGTTGTTTTTTTATATAGA
AAAGCTACTTTTAAAAAGTACTCAATTCGTATTGATTCCAAATGAAGAACGCGCTCAATTGTTTTTTAAAGATAGGGATA
GAACAATAAAGTACGAAGTTGTCGAGAATTTACTTAATGATAAGGAACTATCAACAGAAGATTTAAACTTTAATTCGGTG
CCAAAAACTTTTAAGTTCAATGAAAGGGAGCTACGTTGTTTTTACGCAGGTACTTTTACAGAGGTGAGAGCTTTATCTGA
AATATGTTTAGCGATAGAATTGCTAATAGGAATTGGCTATAAAATTGTGCTAGATTTATATGGTGCAAAGACCGACTGTG
TAAACAAAGTTATCAAATCTCACTCATTTGTAAACTATTGTGGAAGTGTTTCTAGGGCAGAACTACTAAGTAAGTATATT
CATTATGATTTTAGTTTTGCTTTCTACAAGCCAACTAACTTAAATAACATATATTGTGCGCCCACAAAGATATTTGAACA
CGAATACTATATGTTAAAAACTGTCGTTGGACCATCAGGCTATTTATTGAGGCTTGTTGACGAAGGCGTAATTAATAATG
TCGTAGTATCGTTAGGTTATGAGCCAAAGGAAATTGCACATGCTATTACGAGAGTATTAGATAGCGACCAAGGTGCCGTA
TCGCAGAGGCAGAAAGAAAGATTACTTTGGTCCTATCAAATTTCAAAAATAAAACAATTATATCGAAAGTTTAATGGCTG
A

Upstream 100 bases:

>100_bases
GAAGCCTTAGGATATCAGGATTCAGATTTTCCCGTCGCAAGCAGATTAGCTAAAACTGTATTTAGCTTACCAATGCATGG
TTACATGATGGATAAATAGA

Downstream 100 bases:

>100_bases
CTATTTTTTTATTCTCATAGCGTTTCTATCTGCATTTTTTGTCGTGACATACCCTAGACAGGGGACTAAAGTATTTTTGT
TCGTAATTGCGACTCTGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MKIAHVYIGNSIKHPIIKTYIDFSAEIGVTELELIDSKQEGSRVARVFDVLKKLVNSRSTIYQSHDIVSCILVKIFKWNS
VHVYDMHEIYSSYFKNSIIRKLFFYIEKLLLKSTQFVLIPNEERAQLFFKDRDRTIKYEVVENLLNDKELSTEDLNFNSV
PKTFKFNERELRCFYAGTFTEVRALSEICLAIELLIGIGYKIVLDLYGAKTDCVNKVIKSHSFVNYCGSVSRAELLSKYI
HYDFSFAFYKPTNLNNIYCAPTKIFEHEYYMLKTVVGPSGYLLRLVDEGVINNVVVSLGYEPKEIAHAITRVLDSDQGAV
SQRQKERLLWSYQISKIKQLYRKFNG

Sequences:

>Translated_346_residues
MKIAHVYIGNSIKHPIIKTYIDFSAEIGVTELELIDSKQEGSRVARVFDVLKKLVNSRSTIYQSHDIVSCILVKIFKWNS
VHVYDMHEIYSSYFKNSIIRKLFFYIEKLLLKSTQFVLIPNEERAQLFFKDRDRTIKYEVVENLLNDKELSTEDLNFNSV
PKTFKFNERELRCFYAGTFTEVRALSEICLAIELLIGIGYKIVLDLYGAKTDCVNKVIKSHSFVNYCGSVSRAELLSKYI
HYDFSFAFYKPTNLNNIYCAPTKIFEHEYYMLKTVVGPSGYLLRLVDEGVINNVVVSLGYEPKEIAHAITRVLDSDQGAV
SQRQKERLLWSYQISKIKQLYRKFNG
>Mature_346_residues
MKIAHVYIGNSIKHPIIKTYIDFSAEIGVTELELIDSKQEGSRVARVFDVLKKLVNSRSTIYQSHDIVSCILVKIFKWNS
VHVYDMHEIYSSYFKNSIIRKLFFYIEKLLLKSTQFVLIPNEERAQLFFKDRDRTIKYEVVENLLNDKELSTEDLNFNSV
PKTFKFNERELRCFYAGTFTEVRALSEICLAIELLIGIGYKIVLDLYGAKTDCVNKVIKSHSFVNYCGSVSRAELLSKYI
HYDFSFAFYKPTNLNNIYCAPTKIFEHEYYMLKTVVGPSGYLLRLVDEGVINNVVVSLGYEPKEIAHAITRVLDSDQGAV
SQRQKERLLWSYQISKIKQLYRKFNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40218; Mature: 40218

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAHVYIGNSIKHPIIKTYIDFSAEIGVTELELIDSKQEGSRVARVFDVLKKLVNSRST
CEEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCHHH
IYQSHDIVSCILVKIFKWNSVHVYDMHEIYSSYFKNSIIRKLFFYIEKLLLKSTQFVLIP
HHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
NEERAQLFFKDRDRTIKYEVVENLLNDKELSTEDLNFNSVPKTFKFNERELRCFYAGTFT
CCCHHHEEEECCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECHHH
EVRALSEICLAIELLIGIGYKIVLDLYGAKTDCVNKVIKSHSFVNYCGSVSRAELLSKYI
HHHHHHHHHHHHHHHHHCCHHEEHHHHCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHH
HYDFSFAFYKPTNLNNIYCAPTKIFEHEYYMLKTVVGPSGYLLRLVDEGVINNVVVSLGY
HCCEEEEEECCCCCCEEEECCHHHHHHHHEEEEEEECCCCCEEHHHHHHHHHHHHHCCCC
EPKEIAHAITRVLDSDQGAVSQRQKERLLWSYQISKIKQLYRKFNG
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIAHVYIGNSIKHPIIKTYIDFSAEIGVTELELIDSKQEGSRVARVFDVLKKLVNSRST
CEEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCHHH
IYQSHDIVSCILVKIFKWNSVHVYDMHEIYSSYFKNSIIRKLFFYIEKLLLKSTQFVLIP
HHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
NEERAQLFFKDRDRTIKYEVVENLLNDKELSTEDLNFNSVPKTFKFNERELRCFYAGTFT
CCCHHHEEEECCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECHHH
EVRALSEICLAIELLIGIGYKIVLDLYGAKTDCVNKVIKSHSFVNYCGSVSRAELLSKYI
HHHHHHHHHHHHHHHHHCCHHEEHHHHCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHH
HYDFSFAFYKPTNLNNIYCAPTKIFEHEYYMLKTVVGPSGYLLRLVDEGVINNVVVSLGY
HCCEEEEEECCCCCCEEEECCHHHHHHHHEEEEEEECCCCCEEHHHHHHHHHHHHHCCCC
EPKEIAHAITRVLDSDQGAVSQRQKERLLWSYQISKIKQLYRKFNG
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA