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The map label for this gene is motY [H]

Identifier: 119775227

GI number: 119775227

Start: 2536350

End: 2537219

Strand: Reverse

Name: motY [H]

Synonym: Sama_2092

Alternate gene names: 119775227

Gene position: 2537219-2536350 (Counterclockwise)

Preceding gene: 119775229

Following gene: 119775226

Centisome position: 58.92

GC content: 54.94

Gene sequence:

>870_bases
ATGTGGCGTAACTGCTTTATTCTATCTGCACTGCTGCTGCCCCTGGGCGCGGCGGCCGACATGCGTCACTACGTGGCCAG
CATTGCCGACTCCCAGTGGCGCCTGGCTGAGAACTCCCGTATTCGCTGCAGTTTGGAGCATGATATTCCGGCTTACGGCA
AGGCGGTGTTTTCCAGTGCTGCGGGGAAAGATCAGAATCTACTGTTTACCCTGGATATGTGGTCAAAGCCTGATGCAGCG
ACGGCGGCAACTCTGGTGAGTAAAGCGCCCTCCTGGCGCCCCGGCGAAGTTCAGTCCACCATTACCAGGCTCTCATATAT
GAGAGACTTTAACGGGGAAGTACCCAAAAAGGCCGCCTGGTCCATGCTGACCGAGCTTGAGCGGGGACGTGAGCCTACTT
TCTATTATGCCGACTGGTACAACAGCAACAATAAGGTTGCCGTGGGTCTGTCGGCCGCCAATTTCCGCCGCAAGTACACA
GAATTCCGTCAGTGTCTTTCAGGCCTGCTGCCATACAGTTTCGATGATATTGCCTTTACGGTGCTCAATTATGAGTCGGG
CGGAACTGAACTGACCCGCTTTTCCAAGGCGCAGCTGGCACGGGTGCAGGAATACCTGAGCCTGGATCCCGATGTTGAGC
TTATCCTTATCAATGCCTATACCGACAGCCATGGCGGCCGTAACCTGAATCAAAAGGTGTCTGACAAGCGCGCTGATTCA
GTGAAGGACTTTTTTGTCAGTAAAGGCATCCCCGCTGACCGAATCCAGACAGAAGGTCATGGGGAAACGCGTCACGTGGC
ATCCAATCAGGGGGCCGACGAGCGCCAGCGAAACCGCCGGGTGGTTATCCAGATAACCAAAGCTATTTGA

Upstream 100 bases:

>100_bases
GGCGCCTTGGCTGTCATGTTTGATTGCGCAAAATCTGCGCTAAAGAACCGGGAATATTGGTCGATAGTTCCAGAGTAAGC
ATTGAATTGTGAGAATTCCT

Downstream 100 bases:

>100_bases
GGATTAAATTTTCTTCATATAAAAGGCCGCCGACGCGGTCTTTTTTGTTGGGCAGGGATGCAAATCGGGATGTAAAAAAA
AGCCCACTTGATTTCAAGTG

Product: OmpA/MotB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MWRNCFILSALLLPLGAAADMRHYVASIADSQWRLAENSRIRCSLEHDIPAYGKAVFSSAAGKDQNLLFTLDMWSKPDAA
TAATLVSKAPSWRPGEVQSTITRLSYMRDFNGEVPKKAAWSMLTELERGREPTFYYADWYNSNNKVAVGLSAANFRRKYT
EFRQCLSGLLPYSFDDIAFTVLNYESGGTELTRFSKAQLARVQEYLSLDPDVELILINAYTDSHGGRNLNQKVSDKRADS
VKDFFVSKGIPADRIQTEGHGETRHVASNQGADERQRNRRVVIQITKAI

Sequences:

>Translated_289_residues
MWRNCFILSALLLPLGAAADMRHYVASIADSQWRLAENSRIRCSLEHDIPAYGKAVFSSAAGKDQNLLFTLDMWSKPDAA
TAATLVSKAPSWRPGEVQSTITRLSYMRDFNGEVPKKAAWSMLTELERGREPTFYYADWYNSNNKVAVGLSAANFRRKYT
EFRQCLSGLLPYSFDDIAFTVLNYESGGTELTRFSKAQLARVQEYLSLDPDVELILINAYTDSHGGRNLNQKVSDKRADS
VKDFFVSKGIPADRIQTEGHGETRHVASNQGADERQRNRRVVIQITKAI
>Mature_289_residues
MWRNCFILSALLLPLGAAADMRHYVASIADSQWRLAENSRIRCSLEHDIPAYGKAVFSSAAGKDQNLLFTLDMWSKPDAA
TAATLVSKAPSWRPGEVQSTITRLSYMRDFNGEVPKKAAWSMLTELERGREPTFYYADWYNSNNKVAVGLSAANFRRKYT
EFRQCLSGLLPYSFDDIAFTVLNYESGGTELTRFSKAQLARVQEYLSLDPDVELILINAYTDSHGGRNLNQKVSDKRADS
VKDFFVSKGIPADRIQTEGHGETRHVASNQGADERQRNRRVVIQITKAI

Specific function: Plays the role of a stator in the sodium flagellar motor, stabilizing the force-generating unit through direct interaction with the cell wall [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=117, Percent_Identity=35.042735042735, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787191, Length=101, Percent_Identity=37.6237623762376, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 32530; Mature: 32530

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRNCFILSALLLPLGAAADMRHYVASIADSQWRLAENSRIRCSLEHDIPAYGKAVFSSA
CCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCHHHHHHHHHC
AGKDQNLLFTLDMWSKPDAATAATLVSKAPSWRPGEVQSTITRLSYMRDFNGEVPKKAAW
CCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
SMLTELERGREPTFYYADWYNSNNKVAVGLSAANFRRKYTEFRQCLSGLLPYSFDDIAFT
HHHHHHHHCCCCCEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
VLNYESGGTELTRFSKAQLARVQEYLSLDPDVELILINAYTDSHGGRNLNQKVSDKRADS
EEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHH
VKDFFVSKGIPADRIQTEGHGETRHVASNQGADERQRNRRVVIQITKAI
HHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCC
>Mature Secondary Structure
MWRNCFILSALLLPLGAAADMRHYVASIADSQWRLAENSRIRCSLEHDIPAYGKAVFSSA
CCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCHHHHHHHHHC
AGKDQNLLFTLDMWSKPDAATAATLVSKAPSWRPGEVQSTITRLSYMRDFNGEVPKKAAW
CCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH
SMLTELERGREPTFYYADWYNSNNKVAVGLSAANFRRKYTEFRQCLSGLLPYSFDDIAFT
HHHHHHHHCCCCCEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
VLNYESGGTELTRFSKAQLARVQEYLSLDPDVELILINAYTDSHGGRNLNQKVSDKRADS
EEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHH
VKDFFVSKGIPADRIQTEGHGETRHVASNQGADERQRNRRVVIQITKAI
HHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8021208; 12620739 [H]