Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775205

Identifier: 119775205

GI number: 119775205

Start: 2505349

End: 2505834

Strand: Reverse

Name: 119775205

Synonym: Sama_2070

Alternate gene names: NA

Gene position: 2505834-2505349 (Counterclockwise)

Preceding gene: 119775206

Following gene: 119775204

Centisome position: 58.19

GC content: 53.91

Gene sequence:

>486_bases
ATGACGCAGATACCAGATCCTAACACTCAGTCGGCCAACGCCATGAGTCAGGAAGGGCCCCCCGAGGCCGCCGCCTTTGC
GGCCATGGAGAATATGCTGAAGCCAGCCTTTTGCAGCGAACAACCGCTTTTTGCTATAGATGAAGCTGGGCGATGGCACT
ATCAGGGACAGCCCCTGCCCGATAAATTTGCCCGGCTCTTTATGGGTATCCTCAGGCCCGATAGCGGCGGCTGGGCCCTG
GTAACACCGGCAGAGAGGGTCAAAGTGACGGTAGCCAGAACGCCTGTGGTGATAGTGGATTTTGAAACAGCGGCAGACCA
GTTGATCCTTACCTGTGTGTTGGGAAGCCAGTACCGAGTCGACAAAGCAGATATCTCATTGATGGAAGAGGGTGTTTTGA
TTTCACTTCCCAATTTGAAAACCGGCAGCATGAGCCGTGCCTGCTTCTATCGCTATGCGGAATTACTCCTGTGTGACAAA
GACTGA

Upstream 100 bases:

>100_bases
AAGGCCCTTTCACAGAGTGATGGGGCCTTTTACTTCCGATTTATGCCATCCCGGTTTAGCCTGAGTAACAAGATTAGTGA
TGCAAAGGAAGACACACATC

Downstream 100 bases:

>100_bases
ATTTGCGCAGGGCCGCTAGTGTATTGCGCTTTCGGTGATAGTATTAAGAAGGTGGCTGTGAATTCTGGCCAGCAGCTTGA
ACGACGGGAGGTGCTGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MTQIPDPNTQSANAMSQEGPPEAAAFAAMENMLKPAFCSEQPLFAIDEAGRWHYQGQPLPDKFARLFMGILRPDSGGWAL
VTPAERVKVTVARTPVVIVDFETAADQLILTCVLGSQYRVDKADISLMEEGVLISLPNLKTGSMSRACFYRYAELLLCDK
D

Sequences:

>Translated_161_residues
MTQIPDPNTQSANAMSQEGPPEAAAFAAMENMLKPAFCSEQPLFAIDEAGRWHYQGQPLPDKFARLFMGILRPDSGGWAL
VTPAERVKVTVARTPVVIVDFETAADQLILTCVLGSQYRVDKADISLMEEGVLISLPNLKTGSMSRACFYRYAELLLCDK
D
>Mature_160_residues
TQIPDPNTQSANAMSQEGPPEAAAFAAMENMLKPAFCSEQPLFAIDEAGRWHYQGQPLPDKFARLFMGILRPDSGGWALV
TPAERVKVTVARTPVVIVDFETAADQLILTCVLGSQYRVDKADISLMEEGVLISLPNLKTGSMSRACFYRYAELLLCDKD

Specific function: Unknown

COG id: COG3816

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17700; Mature: 17568

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQIPDPNTQSANAMSQEGPPEAAAFAAMENMLKPAFCSEQPLFAIDEAGRWHYQGQPLP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEECCCCCH
DKFARLFMGILRPDSGGWALVTPAERVKVTVARTPVVIVDFETAADQLILTCVLGSQYRV
HHHHHHHHHHHCCCCCCEEEECCHHHEEEEEECCCEEEEECCCCHHHEEEEEECCCCEEE
DKADISLMEEGVLISLPNLKTGSMSRACFYRYAELLLCDKD
CHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHEEECCC
>Mature Secondary Structure 
TQIPDPNTQSANAMSQEGPPEAAAFAAMENMLKPAFCSEQPLFAIDEAGRWHYQGQPLP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEECCCCCH
DKFARLFMGILRPDSGGWALVTPAERVKVTVARTPVVIVDFETAADQLILTCVLGSQYRV
HHHHHHHHHHHCCCCCCEEEECCHHHEEEEEECCCEEEEECCCCHHHEEEEEECCCCEEE
DKADISLMEEGVLISLPNLKTGSMSRACFYRYAELLLCDKD
CHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA