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The map label for this gene is slyA [C]

Identifier: 119775204

GI number: 119775204

Start: 2504835

End: 2505251

Strand: Reverse

Name: slyA [C]

Synonym: Sama_2069

Alternate gene names: 119775204

Gene position: 2505251-2504835 (Counterclockwise)

Preceding gene: 119775205

Following gene: 119775201

Centisome position: 58.18

GC content: 50.12

Gene sequence:

>417_bases
TTGAATCGTCAGGAGAGTCTTGGTTATTTGGTGTCCCATCTCAATGTGGCCATTGCCAATGAGCTGGATCAACGCCTGAA
GCGCTATCAGCTGGACATTAAACTCTGGCCGGTATTGTTTGCGCTTTGGCAGGAAGAAGGCATTACCCAAACCGAATTGT
CACGTCGCTGCGACGTGGCCAACTACACCATGACCCGGCTGTTGGATCAACTGCAGGTACAGGGACTCATCACGCGGCAT
CAGGAAGCGGATAATCGCCGCGCCTTCAAGATTTTTCTAACAGACGAAGCCAAAGCCCTTGAGCAGGACCTTATCCGTGA
AGCGGAGCGGGTGAATGAAAAGTTTATGGCCGAGCTGAACGTGGAAGAGCAAGATTTGCTGATGAAATTGCTGAACAAGA
TAAATCACACTGAGTGA

Upstream 100 bases:

>100_bases
TGAATTTGCGCAGGGCCGCTAGTGTATTGCGCTTTCGGTGATAGTATTAAGAAGGTGGCTGTGAATTCTGGCCAGCAGCT
TGAACGACGGGAGGTGCTGT

Downstream 100 bases:

>100_bases
TGCTGCTTTTCGTCAAATGGCATCTCAGTTTGCAAAAAAGACCGGCGGTTTGCCGGTCTTTTTGTTGGTGATATTCCTTG
TCGCCATGTCATTCTCGAAC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator MarR Family Protein; HTH-Type Transcriptional Regulator; Transcriptional Regulator MarR; Regulatory Protein MarR; Transcriptional Regulator Protein; MarR Family Transcriptional Regulator Protein

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MNRQESLGYLVSHLNVAIANELDQRLKRYQLDIKLWPVLFALWQEEGITQTELSRRCDVANYTMTRLLDQLQVQGLITRH
QEADNRRAFKIFLTDEAKALEQDLIREAERVNEKFMAELNVEEQDLLMKLLNKINHTE

Sequences:

>Translated_138_residues
MNRQESLGYLVSHLNVAIANELDQRLKRYQLDIKLWPVLFALWQEEGITQTELSRRCDVANYTMTRLLDQLQVQGLITRH
QEADNRRAFKIFLTDEAKALEQDLIREAERVNEKFMAELNVEEQDLLMKLLNKINHTE
>Mature_138_residues
MNRQESLGYLVSHLNVAIANELDQRLKRYQLDIKLWPVLFALWQEEGITQTELSRRCDVANYTMTRLLDQLQVQGLITRH
QEADNRRAFKIFLTDEAKALEQDLIREAERVNEKFMAELNVEEQDLLMKLLNKINHTE

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16341; Mature: 16341

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRQESLGYLVSHLNVAIANELDQRLKRYQLDIKLWPVLFALWQEEGITQTELSRRCDVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHH
NYTMTRLLDQLQVQGLITRHQEADNRRAFKIFLTDEAKALEQDLIREAERVNEKFMAELN
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCC
VEEQDLLMKLLNKINHTE
CCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNRQESLGYLVSHLNVAIANELDQRLKRYQLDIKLWPVLFALWQEEGITQTELSRRCDVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHH
NYTMTRLLDQLQVQGLITRHQEADNRRAFKIFLTDEAKALEQDLIREAERVNEKFMAELN
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCC
VEEQDLLMKLLNKINHTE
CCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA