| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is dgkA [H]
Identifier: 119775131
GI number: 119775131
Start: 2426623
End: 2426994
Strand: Direct
Name: dgkA [H]
Synonym: Sama_1996
Alternate gene names: 119775131
Gene position: 2426623-2426994 (Clockwise)
Preceding gene: 119775128
Following gene: 119775133
Centisome position: 56.35
GC content: 53.49
Gene sequence:
>372_bases ATGAAACCAGCCAATAACCATGGCTTCAGGCGCGTTATTCGTGCGACCGGCTTTTCTTTTAAAGGGTTAAAGTCCGCCTG GGTCCACGAAGCGGCCTTTCGGCAGGAACTGATCCTTGCATGCGTGATGGTGCCGTTTGCACTTTGGCTGGATGTGAGTA CGGTTGAAAAACTACTGATGATCATGGCGGTGTTCATTGTGCTCATCACTGAACTGCTGAACTCTGCCATAGAAGCGGTT GTGGACCGAATCGGGGATGAAATCCACCCCCTTTCGGGTCAAGCCAAGGACATAGCCTCAGCAGCCGTGTTTATGAGCCT GGCACTGTGCGCCCTGGTGTGGGCCTTTATCCTGCTGCCGCTGCTCTGGTAA
Upstream 100 bases:
>100_bases TTTTATGGCCAGCCGCGCTTTTACTGAACGTTCAGCATAATGGCGTCGTCTTCGGTCATGTTTGAGCCCGACTGTTGGGC TTGGCAATCTGGGGGAATAC
Downstream 100 bases:
>100_bases TTGCTGCGCTTTTTTACTCAGGCGCTGAGCTCTTCAGCGCCTTCATCAGACTCCCGCGCCAGAAAACTCACCGCCCGCTC TATTTGCGATAGTCTGTCAT
Product: diacylglycerol kinase
Products: NA
Alternate protein names: DAGK; Diglyceride kinase; DGK [H]
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MKPANNHGFRRVIRATGFSFKGLKSAWVHEAAFRQELILACVMVPFALWLDVSTVEKLLMIMAVFIVLITELLNSAIEAV VDRIGDEIHPLSGQAKDIASAAVFMSLALCALVWAFILLPLLW
Sequences:
>Translated_123_residues MKPANNHGFRRVIRATGFSFKGLKSAWVHEAAFRQELILACVMVPFALWLDVSTVEKLLMIMAVFIVLITELLNSAIEAV VDRIGDEIHPLSGQAKDIASAAVFMSLALCALVWAFILLPLLW >Mature_123_residues MKPANNHGFRRVIRATGFSFKGLKSAWVHEAAFRQELILACVMVPFALWLDVSTVEKLLMIMAVFIVLITELLNSAIEAV VDRIGDEIHPLSGQAKDIASAAVFMSLALCALVWAFILLPLLW
Specific function: Recycling of diacylglycerol produced during the turnover of membrane phospholipid [H]
COG id: COG0818
COG function: function code M; Diacylglycerol kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial diacylglycerol kinase family [H]
Homologues:
Organism=Escherichia coli, GI1790475, Length=114, Percent_Identity=51.7543859649123, Blast_Score=128, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000829 [H]
Pfam domain/function: PF01219 DAGK_prokar [H]
EC number: =2.7.1.107 [H]
Molecular weight: Translated: 13623; Mature: 13623
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: PS01069 DAGK_PROKAR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPANNHGFRRVIRATGFSFKGLKSAWVHEAAFRQELILACVMVPFALWLDVSTVEKLLM CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMAVFIVLITELLNSAIEAVVDRIGDEIHPLSGQAKDIASAAVFMSLALCALVWAFILLP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLW HCC >Mature Secondary Structure MKPANNHGFRRVIRATGFSFKGLKSAWVHEAAFRQELILACVMVPFALWLDVSTVEKLLM CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMAVFIVLITELLNSAIEAVVDRIGDEIHPLSGQAKDIASAAVFMSLALCALVWAFILLP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLW HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]