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The map label for this gene is yifE [C]

Identifier: 119775133

GI number: 119775133

Start: 2428020

End: 2428457

Strand: Direct

Name: yifE [C]

Synonym: Sama_1998

Alternate gene names: 119775133

Gene position: 2428020-2428457 (Clockwise)

Preceding gene: 119775131

Following gene: 119775134

Centisome position: 56.39

GC content: 52.51

Gene sequence:

>438_bases
ATGTCAGAACAGTTAGTTGCCAGCAAAATCTATCAGGGTATGCCCGAATCCGCCCCGATGAGCTTTCTGAGTCAAAGGCG
CTTTTATGACGATGCCAATTTCCCCAAGGGGTTTCGCCGCAGTGGAGACTTTACCAACAAAGAAGCCGAATTGTTGGAAT
GTCATGGTCTGGCGATGAAGGCGCTCGCCGATGGCAGTCGCCTGCCATCGACTGATGAAGAAGCGCAATTTGTCGATGTT
GTGCGCGGGAACAAGTCCGCCAGTAGCATACTGGAGCAGATCTGGTTAAAGTATTGCAAGCTGGCTCAGGGTAAGCCTTT
CTACGCGGTCGTTGGCACTGTCCACGCCCCTGCAGTGGCACCTGAGGCTGAAATTGAACTCGATGATATCGACGATGACG
AGGTTTCTGATGACGAGGAACCCGAGGACACACCATGA

Upstream 100 bases:

>100_bases
ATTCCTAATTCAAGGATACTAGCCAATACTCCAGTTGCAAATTATCCCACAGCTTAGGTAATCATCGCTATCAGCTTTTG
TTGTATGGAAGGAAAAGACA

Downstream 100 bases:

>100_bases
CGCTTAAGGCGAATATCTGAATGCGCGGCTGGATTTTATATAAAGAAACCGCGACTCAGCTCAAACCCGAACTGTACGAA
ATTCAACGTCTGTTGGACGC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSEQLVASKIYQGMPESAPMSFLSQRRFYDDANFPKGFRRSGDFTNKEAELLECHGLAMKALADGSRLPSTDEEAQFVDV
VRGNKSASSILEQIWLKYCKLAQGKPFYAVVGTVHAPAVAPEAEIELDDIDDDEVSDDEEPEDTP

Sequences:

>Translated_145_residues
MSEQLVASKIYQGMPESAPMSFLSQRRFYDDANFPKGFRRSGDFTNKEAELLECHGLAMKALADGSRLPSTDEEAQFVDV
VRGNKSASSILEQIWLKYCKLAQGKPFYAVVGTVHAPAVAPEAEIELDDIDDDEVSDDEEPEDTP
>Mature_144_residues
SEQLVASKIYQGMPESAPMSFLSQRRFYDDANFPKGFRRSGDFTNKEAELLECHGLAMKALADGSRLPSTDEEAQFVDVV
RGNKSASSILEQIWLKYCKLAQGKPFYAVVGTVHAPAVAPEAEIELDDIDDDEVSDDEEPEDTP

Specific function: Not known, a mutation in ORF3 causes a slight decrease in transformation efficiency [H]

COG id: COG3085

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0438 family [H]

Homologues:

Organism=Escherichia coli, GI2367277, Length=93, Percent_Identity=43.010752688172, Blast_Score=83, Evalue=6e-18,

Paralogues:

None

Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007335 [H]

Pfam domain/function: PF04219 DUF413 [H]

EC number: NA

Molecular weight: Translated: 16063; Mature: 15932

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQLVASKIYQGMPESAPMSFLSQRRFYDDANFPKGFRRSGDFTNKEAELLECHGLAMK
CCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ALADGSRLPSTDEEAQFVDVVRGNKSASSILEQIWLKYCKLAQGKPFYAVVGTVHAPAVA
HHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
PEAEIELDDIDDDEVSDDEEPEDTP
CCCCEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SEQLVASKIYQGMPESAPMSFLSQRRFYDDANFPKGFRRSGDFTNKEAELLECHGLAMK
CCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ALADGSRLPSTDEEAQFVDVVRGNKSASSILEQIWLKYCKLAQGKPFYAVVGTVHAPAVA
HHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
PEAEIELDDIDDDEVSDDEEPEDTP
CCCCEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1438213; 7542800; 10675023 [H]