Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775097

Identifier: 119775097

GI number: 119775097

Start: 2390319

End: 2391248

Strand: Reverse

Name: 119775097

Synonym: Sama_1962

Alternate gene names: NA

Gene position: 2391248-2390319 (Counterclockwise)

Preceding gene: 119775098

Following gene: 119775096

Centisome position: 55.53

GC content: 49.14

Gene sequence:

>930_bases
ATGTTTTTTGAAGGTTCAGAAAAAAAAATAGAAGTCATAGTCACCCGCGAATTCGGCTCACTCAGAGCACTGGGGCGTGA
ATTCTGGAAAGAGATGGTGGCCTGCGCCAATGCGGAAATCCTCTCCAGTATCAACAATGAACACTGCGATGCCTACTTGC
TCAGCGAATCGAGTTTGTTTGTCTGGGACGACAGGTTCCTGATGTTGACCTGCGGCACCACAACCCTCGCTAAAGCCGTT
GTCCGTTTTATCAATGAAGTCGGTGCTGAAAAGATTGCTTTTGCCAGCTATCAGCGCAAAAACGAGTATCTGTCACACTT
GCAAAGCAGTGCCTTTACCGACGATTTAACCGCCATCCGCGCGTTGTTGCCGGGGGATGCATTCAGAATCGGACATCTGG
ATTCCCACCATCACTATATTTTCACCAGCAACAAACCTTACGAAGCAACTGCAGATGACCATACCAGTGAGCTTTTGATG
TACCACATCCGTGGTGAGGCTGCCGATTACTTGCGCAGTGAACATCAGAGTGCTGCTGAAATCCGCCGCCTGTTGCAATT
GGATGCCATGTTACCCGGGTTTGTATTTGACGACTTTTTGTTTGAACCTTTTGGGTATTCTATCAATGGCATCCGTGGCG
ATCGCTACATGACCATTCATATTACGCCCCAGGAAAACAGCTCCTACGTGAGCTTTGAAACCAACTTGCCGCTGGAAGGC
GAATATCGTCAAATCTTCTCTCGTTTGCTGGGTATTCTAAATCCGGGCAGTTGGGATGAGATTGGGTTTAACGCCCAGCG
TCATACCGAAAACTACCCCGCGCACCTGTGCCTGGGAAGCTGTGCCTTATCCATGTCCCAGGGGTATAGGGTGGAGTTCA
GCCACTATCAGCAGTTGTGTCATGAAGTGCTTATTCCCGAGCCCATGTAA

Upstream 100 bases:

>100_bases
GGCTACACCTATCTGGAAGACTTTTAACCCATACTAAGGCAAGGTGAAGCCAGGCCGGGGAACCAGGGCGTAAGCCCTCC
CGGCCCTCAGGTAGAGAAAA

Downstream 100 bases:

>100_bases
TCTTCGCCCCGCCAGACGTTATCCCCTTTGCGCCTGAGGTCTCTGGCTATACGCAGAGAATTGTGTTGATTACTCCGTGT
AATCAGCGGATACCGAAGCC

Product: adenosylmethionine decarboxylase

Products: NA

Alternate protein names: S-Adenosylmethionine Decarboxylase; S-Adenosylmethionine Decarboxylase Pro

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MFFEGSEKKIEVIVTREFGSLRALGREFWKEMVACANAEILSSINNEHCDAYLLSESSLFVWDDRFLMLTCGTTTLAKAV
VRFINEVGAEKIAFASYQRKNEYLSHLQSSAFTDDLTAIRALLPGDAFRIGHLDSHHHYIFTSNKPYEATADDHTSELLM
YHIRGEAADYLRSEHQSAAEIRRLLQLDAMLPGFVFDDFLFEPFGYSINGIRGDRYMTIHITPQENSSYVSFETNLPLEG
EYRQIFSRLLGILNPGSWDEIGFNAQRHTENYPAHLCLGSCALSMSQGYRVEFSHYQQLCHEVLIPEPM

Sequences:

>Translated_309_residues
MFFEGSEKKIEVIVTREFGSLRALGREFWKEMVACANAEILSSINNEHCDAYLLSESSLFVWDDRFLMLTCGTTTLAKAV
VRFINEVGAEKIAFASYQRKNEYLSHLQSSAFTDDLTAIRALLPGDAFRIGHLDSHHHYIFTSNKPYEATADDHTSELLM
YHIRGEAADYLRSEHQSAAEIRRLLQLDAMLPGFVFDDFLFEPFGYSINGIRGDRYMTIHITPQENSSYVSFETNLPLEG
EYRQIFSRLLGILNPGSWDEIGFNAQRHTENYPAHLCLGSCALSMSQGYRVEFSHYQQLCHEVLIPEPM
>Mature_309_residues
MFFEGSEKKIEVIVTREFGSLRALGREFWKEMVACANAEILSSINNEHCDAYLLSESSLFVWDDRFLMLTCGTTTLAKAV
VRFINEVGAEKIAFASYQRKNEYLSHLQSSAFTDDLTAIRALLPGDAFRIGHLDSHHHYIFTSNKPYEATADDHTSELLM
YHIRGEAADYLRSEHQSAAEIRRLLQLDAMLPGFVFDDFLFEPFGYSINGIRGDRYMTIHITPQENSSYVSFETNLPLEG
EYRQIFSRLLGILNPGSWDEIGFNAQRHTENYPAHLCLGSCALSMSQGYRVEFSHYQQLCHEVLIPEPM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI74275346, Length=276, Percent_Identity=33.3333333333333, Blast_Score=128, Evalue=6e-30,
Organism=Homo sapiens, GI74275348, Length=133, Percent_Identity=33.0827067669173, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17508719, Length=275, Percent_Identity=33.4545454545455, Blast_Score=116, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6324521, Length=293, Percent_Identity=26.962457337884, Blast_Score=74, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24583360, Length=282, Percent_Identity=32.2695035460993, Blast_Score=137, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35323; Mature: 35323

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS01336 ADOMETDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFEGSEKKIEVIVTREFGSLRALGREFWKEMVACANAEILSSINNEHCDAYLLSESSLF
CCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCEEE
VWDDRFLMLTCGTTTLAKAVVRFINEVGAEKIAFASYQRKNEYLSHLQSSAFTDDLTAIR
EEECCEEEEEECHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ALLPGDAFRIGHLDSHHHYIFTSNKPYEATADDHTSELLMYHIRGEAADYLRSEHQSAAE
HHCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCHHHEEEEEECCHHHHHHHHHHHHHHH
IRRLLQLDAMLPGFVFDDFLFEPFGYSINGIRGDRYMTIHITPQENSSYVSFETNLPLEG
HHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCEEEEEEEEECCCCCEEEEECCCCCCC
EYRQIFSRLLGILNPGSWDEIGFNAQRHTENYPAHLCLGSCALSMSQGYRVEFSHYQQLC
HHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHH
HEVLIPEPM
HHHCCCCCC
>Mature Secondary Structure
MFFEGSEKKIEVIVTREFGSLRALGREFWKEMVACANAEILSSINNEHCDAYLLSESSLF
CCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCEEE
VWDDRFLMLTCGTTTLAKAVVRFINEVGAEKIAFASYQRKNEYLSHLQSSAFTDDLTAIR
EEECCEEEEEECHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ALLPGDAFRIGHLDSHHHYIFTSNKPYEATADDHTSELLMYHIRGEAADYLRSEHQSAAE
HHCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCHHHEEEEEECCHHHHHHHHHHHHHHH
IRRLLQLDAMLPGFVFDDFLFEPFGYSINGIRGDRYMTIHITPQENSSYVSFETNLPLEG
HHHHHHHHHCCCCHHHHHHHHCCCCCEEECCCCCEEEEEEEEECCCCCEEEEECCCCCCC
EYRQIFSRLLGILNPGSWDEIGFNAQRHTENYPAHLCLGSCALSMSQGYRVEFSHYQQLC
HHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHH
HEVLIPEPM
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA