| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
Click here to switch to the map view.
The map label for this gene is 119775071
Identifier: 119775071
GI number: 119775071
Start: 2363746
End: 2364576
Strand: Reverse
Name: 119775071
Synonym: Sama_1936
Alternate gene names: NA
Gene position: 2364576-2363746 (Counterclockwise)
Preceding gene: 119775072
Following gene: 119775070
Centisome position: 54.91
GC content: 52.83
Gene sequence:
>831_bases ATGTATTTCAAGGAGAACATGATGAAAAAATTGCTGGTAGCGGGCCTGGTATCCTGGGCCGGACTGACAGGGATGGCACA TGCCATGACATTGGAAGAGGCGGCTCTAAACAGTCTGCGTACACCCGCCAATGTTGAGCGCGATCAGTATCGTCATCCTG TTGAGACGCTGAGCTTTTTCGGTGTAAAGGACAACCTAACCGTGGTGGAGTTCTGGCCCGGTGGCGGCTGGTATACTGAA ATTCTGGCACCATTGCTTAATGAAAATGGCCAGTATGTCGCTGCGAATTTTGAAACCAACCCCGCCCCCGAGGCTAATAG CCCTGCCTATCGTATTCGTCTCGGTAAGGCGCTGGAAGGCTGGCTCGAAACCCATGCCGATAAGGTAGGGAATGCGAAAA CTGTAACCTTCGACCCTCCTCATAAAACGTCATTGGGTGAAAGCGGTAGCGCCGATGTGGTGCTGACGTTCCGCAACATG CATAACTGGGCTATGGCCGGTCAAGCGGAGATGGTGCTCAGCGCCGCCTTTGATGTATTAAAGCCAGGCGGTGTATTCGG CGTAGTGGAACACAGGGCCAAGCCGGGTATGAGTCTTAAGTCAGGCTACATGGAAGAAAACGAAGTGATCCGTTTAGCCA AAGCGGCAGGCTTTGTGCTGGCAGATAAGAGTGAAGTTAACGCGAATCCCCGTGACACCAAAGACTATGCTGATGGTGTC TGGACTTTGCCGCCATCACTCCGTAAAGGTGATACGGATAAGGCCCGTTACCTGGCCATCGGCGAGAGTGACCGTATGAC CCTTAAGTTTGTGAAACCGGCCGAGCGTTGA
Upstream 100 bases:
>100_bases TCGGGTTAATGCCCTGGTCAATTGCAACAAATTATGAATTCCCCTTGGAAAACCCCCTGAGCCTTGTTAGCTTCGGTGCC AGTATTAGTAAGGTATTTCG
Downstream 100 bases:
>100_bases GCTGGATTGACTCACGTGTTTAAAGGGGCCTATGAGCACCGTTAACACGACTTTAAGTCATTGCCCATGCCGGGAAATGC CGATACCGGAACACCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: O-Methyltransferase; Methyltransferase Type; Methyltransferase-Like Protein; Exported Methyltransferase; Tat Pathway Signal Sequence Domain Protein
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MYFKENMMKKLLVAGLVSWAGLTGMAHAMTLEEAALNSLRTPANVERDQYRHPVETLSFFGVKDNLTVVEFWPGGGWYTE ILAPLLNENGQYVAANFETNPAPEANSPAYRIRLGKALEGWLETHADKVGNAKTVTFDPPHKTSLGESGSADVVLTFRNM HNWAMAGQAEMVLSAAFDVLKPGGVFGVVEHRAKPGMSLKSGYMEENEVIRLAKAAGFVLADKSEVNANPRDTKDYADGV WTLPPSLRKGDTDKARYLAIGESDRMTLKFVKPAER
Sequences:
>Translated_276_residues MYFKENMMKKLLVAGLVSWAGLTGMAHAMTLEEAALNSLRTPANVERDQYRHPVETLSFFGVKDNLTVVEFWPGGGWYTE ILAPLLNENGQYVAANFETNPAPEANSPAYRIRLGKALEGWLETHADKVGNAKTVTFDPPHKTSLGESGSADVVLTFRNM HNWAMAGQAEMVLSAAFDVLKPGGVFGVVEHRAKPGMSLKSGYMEENEVIRLAKAAGFVLADKSEVNANPRDTKDYADGV WTLPPSLRKGDTDKARYLAIGESDRMTLKFVKPAER >Mature_276_residues MYFKENMMKKLLVAGLVSWAGLTGMAHAMTLEEAALNSLRTPANVERDQYRHPVETLSFFGVKDNLTVVEFWPGGGWYTE ILAPLLNENGQYVAANFETNPAPEANSPAYRIRLGKALEGWLETHADKVGNAKTVTFDPPHKTSLGESGSADVVLTFRNM HNWAMAGQAEMVLSAAFDVLKPGGVFGVVEHRAKPGMSLKSGYMEENEVIRLAKAAGFVLADKSEVNANPRDTKDYADGV WTLPPSLRKGDTDKARYLAIGESDRMTLKFVKPAER
Specific function: Unknown
COG id: COG4798
COG function: function code R; Predicted methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30336; Mature: 30336
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFKENMMKKLLVAGLVSWAGLTGMAHAMTLEEAALNSLRTPANVERDQYRHPVETLSFF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHC GVKDNLTVVEFWPGGGWYTEILAPLLNENGQYVAANFETNPAPEANSPAYRIRLGKALEG CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEECHHHHH WLETHADKVGNAKTVTFDPPHKTSLGESGSADVVLTFRNMHNWAMAGQAEMVLSAAFDVL HHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHCCHHHHHHHHHHHHH KPGGVFGVVEHRAKPGMSLKSGYMEENEVIRLAKAAGFVLADKSEVNANPRDTKDYADGV CCCCEEEEEECCCCCCCCHHCCCCCCHHHHHHHHHCCEEEECCHHCCCCCCCCHHHHCCE WTLPPSLRKGDTDKARYLAIGESDRMTLKFVKPAER EECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCC >Mature Secondary Structure MYFKENMMKKLLVAGLVSWAGLTGMAHAMTLEEAALNSLRTPANVERDQYRHPVETLSFF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHC GVKDNLTVVEFWPGGGWYTEILAPLLNENGQYVAANFETNPAPEANSPAYRIRLGKALEG CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEECHHHHH WLETHADKVGNAKTVTFDPPHKTSLGESGSADVVLTFRNMHNWAMAGQAEMVLSAAFDVL HHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHCCHHHHHHHHHHHHH KPGGVFGVVEHRAKPGMSLKSGYMEENEVIRLAKAAGFVLADKSEVNANPRDTKDYADGV CCCCEEEEEECCCCCCCCHHCCCCCCHHHHHHHHHCCEEEECCHHCCCCCCCCHHHHCCE WTLPPSLRKGDTDKARYLAIGESDRMTLKFVKPAER EECCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA