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The map label for this gene is rnfG

Identifier: 119774969

GI number: 119774969

Start: 2234527

End: 2235174

Strand: Direct

Name: rnfG

Synonym: Sama_1834

Alternate gene names: 119774969

Gene position: 2234527-2235174 (Clockwise)

Preceding gene: 119774968

Following gene: 119774970

Centisome position: 51.89

GC content: 52.47

Gene sequence:

>648_bases
ATGCAAAAATCCATCATCAAAAACGGACTCCTCTTAAGCGGTTTTGCGCTTATCTGTACCGCAGCGGTTGCGCTGGTGAA
CGAGGCTACCAAAGACAAGATTGCCGAGCAGCAACGTCTTGAGCTGACTCGAATACTGCACCAGATAGTACCCGATGAAA
TTCACGACAACGACCTCGGTGGAAGCTGTATTCTCGTTCACAATGCCGACGCTTTGGGCACAGACGAGCCCATGCCGGTT
TACCTTGCAAGCAGCGCCAATGAGCCCGTGGCGCTGGCCATAGAAACCATTGCTCCCGATGGGTATAACGGCAACATTCG
CCTTATCATAGGGGTAGATCTTAAGGGTAAGGTGCTTGGTGTCCGCACCCTCACCCATCAGGAAACACCGGGGCTTGGCG
ATAAGATTGAGCTGCGTAAATCCAACTGGGTACTGTCGTTTAACGATAAGGTGTTTTCTGACAAGGCTAATGACCGCTGG
AAGGTGAAAAAGGACGGCGGTGACTTTGATCAGTTCACGGGTGCCACCATTACCCCCAGAGCCTACCTCAAGGCAGTGAG
CCGTACCCTGATCTTCGTCAGTGCCAATCAGGCCGAGTGGTTTAATCGGCCGCTGGGCTGTGATAACGGAGCCAATGCAG
ATGAGTAA

Upstream 100 bases:

>100_bases
GGCGTTCGCGGTATTGCTGGCTAACCTCTGCGCTCCACTAATCGACTATTACATCAAGCCACGGGCCTATGGCCACCGTG
GCAGCCTGTAGGACCTGGCG

Downstream 100 bases:

>100_bases
CTACAAAGAAATTGCCTGGCAAGGGCTGTGGAAAAATAACCCGGGGCTGGTGCAGCTTTTGGGGCTTTGTCCACTCCTTG
CCGTCACAGCCACCCTGACC

Product: electron transport complex protein RnfG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MQKSIIKNGLLLSGFALICTAAVALVNEATKDKIAEQQRLELTRILHQIVPDEIHDNDLGGSCILVHNADALGTDEPMPV
YLASSANEPVALAIETIAPDGYNGNIRLIIGVDLKGKVLGVRTLTHQETPGLGDKIELRKSNWVLSFNDKVFSDKANDRW
KVKKDGGDFDQFTGATITPRAYLKAVSRTLIFVSANQAEWFNRPLGCDNGANADE

Sequences:

>Translated_215_residues
MQKSIIKNGLLLSGFALICTAAVALVNEATKDKIAEQQRLELTRILHQIVPDEIHDNDLGGSCILVHNADALGTDEPMPV
YLASSANEPVALAIETIAPDGYNGNIRLIIGVDLKGKVLGVRTLTHQETPGLGDKIELRKSNWVLSFNDKVFSDKANDRW
KVKKDGGDFDQFTGATITPRAYLKAVSRTLIFVSANQAEWFNRPLGCDNGANADE
>Mature_215_residues
MQKSIIKNGLLLSGFALICTAAVALVNEATKDKIAEQQRLELTRILHQIVPDEIHDNDLGGSCILVHNADALGTDEPMPV
YLASSANEPVALAIETIAPDGYNGNIRLIIGVDLKGKVLGVRTLTHQETPGLGDKIELRKSNWVLSFNDKVFSDKANDRW
KVKKDGGDFDQFTGATITPRAYLKAVSRTLIFVSANQAEWFNRPLGCDNGANADE

Specific function: May be part of a membrane complex involved in electron transport

COG id: COG4659

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfG

Gene ontology:

Cell location: Cell inner membrane (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnfG family

Homologues:

Organism=Escherichia coli, GI1787918, Length=204, Percent_Identity=47.5490196078431, Blast_Score=182, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNFG_SHEAM (A1S6N3)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_927709.1
- STRING:   A1S6N3
- GeneID:   4604084
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_1834
- NMPDR:   fig|326297.7.peg.1726
- eggNOG:   COG4659
- HOGENOM:   HBG454413
- OMA:   GMFDQFT
- PhylomeDB:   A1S6N3
- GO:   GO:0006810
- HAMAP:   MF_00479
- InterPro:   IPR022989
- InterPro:   IPR010209
- InterPro:   IPR007329
- SMART:   SM00900
- TIGRFAMs:   TIGR01947

Pfam domain/function: PF04205 FMN_bind

EC number: NA

Molecular weight: Translated: 23413; Mature: 23413

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1417cad0)-;

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKSIIKNGLLLSGFALICTAAVALVNEATKDKIAEQQRLELTRILHQIVPDEIHDNDLG
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GSCILVHNADALGTDEPMPVYLASSANEPVALAIETIAPDGYNGNIRLIIGVDLKGKVLG
CEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEEE
VRTLTHQETPGLGDKIELRKSNWVLSFNDKVFSDKANDRWKVKKDGGDFDQFTGATITPR
EEEECCCCCCCCCCEEEEECCCEEEEECCCEECCCCCCCEEEECCCCCHHHCCCCEECHH
AYLKAVSRTLIFVSANQAEWFNRPLGCDNGANADE
HHHHHHHHEEEEEECCCHHHHCCCCCCCCCCCCCH
>Mature Secondary Structure
MQKSIIKNGLLLSGFALICTAAVALVNEATKDKIAEQQRLELTRILHQIVPDEIHDNDLG
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GSCILVHNADALGTDEPMPVYLASSANEPVALAIETIAPDGYNGNIRLIIGVDLKGKVLG
CEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEEE
VRTLTHQETPGLGDKIELRKSNWVLSFNDKVFSDKANDRWKVKKDGGDFDQFTGATITPR
EEEECCCCCCCCCCEEEEECCCEEEEECCCEECCCCCCCEEEECCCCCHHHCCCCEECHH
AYLKAVSRTLIFVSANQAEWFNRPLGCDNGANADE
HHHHHHHHEEEEEECCCHHHHCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA